RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 PKHD1P08F94 4074 aa13.13□□□□□ -0.31
RHBDD3-201ENST00000216085 CKS1BP61024 79 aa13.12□□□□□ -0.31
RHBDD3-201ENST00000216085 TSTD3H0UI37 97 aa13.12□□□□□ -0.31
RHBDD3-201ENST00000216085 CXCL5P42830 114 aa13.12□□□□□ -0.31
RHBDD3-201ENST00000216085 LINC01545Q5VT33 79 aa13.12□□□□□ -0.31
RHBDD3-201ENST00000216085 C9orf163Q8N9P6 203 aa13.12□□□□□ -0.31
RHBDD3-201ENST00000216085 COX7B2Q8TF08 81 aa13.11□□□□□ -0.31
RHBDD3-201ENST00000216085 PMCHL2Q9BQD1 86 aa13.11□□□□□ -0.31
RHBDD3-201ENST00000216085 HERVK_113P61574 105 aa13.1□□□□□ -0.31
RHBDD3-201ENST00000216085 SLPIP03973 132 aa13.09□□□□□ -0.31
RHBDD3-201ENST00000216085 KIAA0087Q14695 138 aa13.09□□□□□ -0.31
RHBDD3-201ENST00000216085 IGLV5-39A0A0G2JS06 123 aa13.09□□□□□ -0.31
RHBDD3-201ENST00000216085 TMEM223A0PJW6 202 aa13.09□□□□□ -0.31
RHBDD3-201ENST00000216085 Q6ZRU5 148 aa13.08□□□□□ -0.32
RHBDD3-201ENST00000216085 VAMP8Q9BV40 100 aa13.08□□□□□ -0.32
RHBDD3-201ENST00000216085 SFTA2Q6UW10 78 aa13.06□□□□□ -0.32
RHBDD3-201ENST00000216085 DNAH5Q8TE73 4624 aa13.05□□□□□ -0.32
RHBDD3-201ENST00000216085 TRBV30A0A0K0K1B3 111 aa13.05□□□□□ -0.32
RHBDD3-201ENST00000216085 RNF151Q2KHN1 245 aa13.05□□□□□ -0.32
RHBDD3-201ENST00000216085 LINC01620Q4KN68 170 aa13.05□□□□□ -0.32
RHBDD3-201ENST00000216085 EPPK1P58107 5090 aaKnown RBP13.05□□□□□ -0.32
RHBDD3-201ENST00000216085 C2orf82Q6UX34 121 aa13.04□□□□□ -0.32
RHBDD3-201ENST00000216085 PRO1933Q9H354 126 aa13.04□□□□□ -0.32
RHBDD3-201ENST00000216085 UNQ6190/PRO20217Q6UXQ8 127 aa13.04□□□□□ -0.32
RHBDD3-201ENST00000216085 KRTAP10-1P60331 282 aa13.03□□□□□ -0.32
RHBDD3-201ENST00000216085 PAM16Q9Y3D7 125 aa13.02□□□□□ -0.32
RHBDD3-201ENST00000216085 LOC107984640A0A0U1RRK4 108 aa13.02□□□□□ -0.33
RHBDD3-201ENST00000216085 PLEKHB2Q96CS7 222 aa13.02□□□□□ -0.33
RHBDD3-201ENST00000216085 C10orf25Q5T742 122 aa13.01□□□□□ -0.33
RHBDD3-201ENST00000216085 C6orf48Q9UBA6 75 aa13.01□□□□□ -0.33
RHBDD3-201ENST00000216085 SDIM1Q6ZPB5 146 aa13□□□□□ -0.33
RHBDD3-201ENST00000216085 LEPROTO15243 131 aa12.99□□□□□ -0.33
RHBDD3-201ENST00000216085 SPATA45Q537H7 98 aa12.99□□□□□ -0.33
RHBDD3-201ENST00000216085 DDTP30046 118 aa12.99□□□□□ -0.33
RHBDD3-201ENST00000216085 ATOH7Q8N100 152 aa12.99□□□□□ -0.33
RHBDD3-201ENST00000216085 LINC00474Q9P2X8 69 aa12.99□□□□□ -0.33
RHBDD3-201ENST00000216085 DYNC1H1Q14204 4646 aaKnown RBP12.98□□□□□ -0.33
RHBDD3-201ENST00000216085 RPL18AQ02543 176 aaKnown RBP12.98□□□□□ -0.33
RHBDD3-201ENST00000216085 HSBP1L1C9JCN9 74 aa12.97□□□□□ -0.33
RHBDD3-201ENST00000216085 E9PLD3 99 aa12.97□□□□□ -0.33
RHBDD3-201ENST00000216085 LGALS3P17931 250 aaKnown RBP12.97□□□□□ -0.33
RHBDD3-201ENST00000216085 LRP1BQ9NZR2 4599 aa12.96□□□□□ -0.33
RHBDD3-201ENST00000216085 TLX1NBP0CAT3 122 aa12.96□□□□□ -0.34
RHBDD3-201ENST00000216085 NDUFC2-KCTD14E9PQ53 114 aa12.95□□□□□ -0.34
RHBDD3-201ENST00000216085 J3QQQ9 107 aa12.95□□□□□ -0.34
RHBDD3-201ENST00000216085 IGKV2-24A0A0C4DH68 120 aa12.94□□□□□ -0.34
RHBDD3-201ENST00000216085 MYMXA0A1B0GTQ4 84 aa12.94□□□□□ -0.34
RHBDD3-201ENST00000216085 NMUP48645 174 aa12.94□□□□□ -0.34
RHBDD3-201ENST00000216085 GAGE2BQ13066 116 aa12.94□□□□□ -0.34
RHBDD3-201ENST00000216085 Q6ZSA8 131 aa12.94□□□□□ -0.34
RHBDD3-201ENST00000216085 DPH3Q96FX2 82 aa12.94□□□□□ -0.34
RHBDD3-201ENST00000216085 NDUFA12Q9UI09 145 aa12.94□□□□□ -0.34
RHBDD3-201ENST00000216085 HERV-K104P63124 156 aa12.94□□□□□ -0.34
RHBDD3-201ENST00000216085 STPG4Q8N801 248 aa12.94□□□□□ -0.34
RHBDD3-201ENST00000216085 A0A096LNI7 61 aa12.93□□□□□ -0.34
RHBDD3-201ENST00000216085 PTTG1IPP53801 180 aa12.93□□□□□ -0.34
RHBDD3-201ENST00000216085 C9orf116Q5BN46 136 aaPredicted RBP12.93□□□□□ -0.34
RHBDD3-201ENST00000216085 ZNF625Q96I27 306 aaPredicted RBP12.93□□□□□ -0.34
RHBDD3-201ENST00000216085 MIEN1Q9BRT3 115 aa12.93□□□□□ -0.34
RHBDD3-201ENST00000216085 CDK2AP2O75956 126 aa12.92□□□□□ -0.34
RHBDD3-201ENST00000216085 MAJINQ3KP22 176 aa12.92□□□□□ -0.34
RHBDD3-201ENST00000216085 LBHQ53QV2 105 aaPredicted RBP12.92□□□□□ -0.34
RHBDD3-201ENST00000216085 COX17Q14061 63 aa12.91□□□□□ -0.34
RHBDD3-201ENST00000216085 ERG28Q9UKR5 140 aa12.91□□□□□ -0.34
RHBDD3-201ENST00000216085 CHTF8P0CG12 524 aa12.9□□□□□ -0.34
RHBDD3-201ENST00000216085 TSPEAR-AS2P59090 65 aa12.9□□□□□ -0.34
RHBDD3-201ENST00000216085 SPACA4Q8TDM5 124 aa12.9□□□□□ -0.34
RHBDD3-201ENST00000216085 FAM30AQ9NZY2 134 aa12.9□□□□□ -0.34
RHBDD3-201ENST00000216085 UQCR10Q9UDW1 63 aa12.9□□□□□ -0.34
RHBDD3-201ENST00000216085 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.9□□□□□ -0.34
RHBDD3-201ENST00000216085 CIRBPQ14011 172 aaKnown RBP12.89□□□□□ -0.35
RHBDD3-201ENST00000216085 GAGE2EQ4V326 116 aa12.89□□□□□ -0.35
RHBDD3-201ENST00000216085 MEIG1Q5JSS6 88 aa12.89□□□□□ -0.35
RHBDD3-201ENST00000216085 Q6ZRP5 223 aa12.89□□□□□ -0.35
RHBDD3-201ENST00000216085 GAGE2DQ9UEU5 116 aa12.89□□□□□ -0.35
RHBDD3-201ENST00000216085 C14orf144Q96I85 54 aa12.89□□□□□ -0.35
RHBDD3-201ENST00000216085 PFN2P35080 140 aa12.88□□□□□ -0.35
RHBDD3-201ENST00000216085 BIRC6Q9NR09 4857 aa12.86□□□□□ -0.35
RHBDD3-201ENST00000216085 SCXQ7RTU7 201 aa12.86□□□□□ -0.35
RHBDD3-201ENST00000216085 LINC00158P58513 81 aa12.85□□□□□ -0.35
RHBDD3-201ENST00000216085 PANO1I0J062 215 aa12.84□□□□□ -0.35
RHBDD3-201ENST00000216085 ANKRD39Q53RE8 183 aa12.84□□□□□ -0.35
RHBDD3-201ENST00000216085 DNAH8Q96JB1 4490 aa12.84□□□□□ -0.35
RHBDD3-201ENST00000216085 A0A087WYN8 130 aa12.84□□□□□ -0.35
RHBDD3-201ENST00000216085 IGKV2D-26A0A0A0MRZ7 120 aa12.84□□□□□ -0.35
RHBDD3-201ENST00000216085 ZNF815PA8K554 130 aa12.84□□□□□ -0.35
RHBDD3-201ENST00000216085 CIRBP-AS1Q8TBR5 109 aa12.84□□□□□ -0.35
RHBDD3-201ENST00000216085 XGP55808 180 aa12.83□□□□□ -0.36
RHBDD3-201ENST00000216085 XAGE1AQ9HD64 81 aa12.81□□□□□ -0.36
RHBDD3-201ENST00000216085 APOBP04114 4563 aaKnown RBP12.81□□□□□ -0.36
RHBDD3-201ENST00000216085 SMIM13P0DJ93 91 aa12.81□□□□□ -0.36
RHBDD3-201ENST00000216085 HNRNPA3P51991 378 aaKnown RBP12.81□□□□□ -0.36
RHBDD3-201ENST00000216085 HAMPP81172 84 aa12.81□□□□□ -0.36
RHBDD3-201ENST00000216085 SLC25A34Q6PIV7 304 aa12.81□□□□□ -0.36
RHBDD3-201ENST00000216085 PLAC8Q9NZF1 115 aa12.81□□□□□ -0.36
RHBDD3-201ENST00000216085 A0A0U1RRA0 63 aa12.8□□□□□ -0.36
RHBDD3-201ENST00000216085 A0A1B0GV90 55 aa12.8□□□□□ -0.36
RHBDD3-201ENST00000216085 COX8AP10176 69 aa12.79□□□□□ -0.36
RHBDD3-201ENST00000216085 A0A0J9YXY3 114 aa12.79□□□□□ -0.36
RHBDD3-201ENST00000216085 C9orf129Q5T035 196 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms