RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 FREM2Q5SZK8 3169 aa2.97□□□□□ -1.93
CFTR-201ENST00000003084 DMDP11532 3685 aa2.97□□□□□ -1.93
CFTR-201ENST00000003084 LOC400499M0QZD8 3231 aa2.97□□□□□ -1.93
CFTR-201ENST00000003084 RTTNQ86VV8 2226 aa2.97□□□□□ -1.93
CFTR-201ENST00000003084 A0A096LNI7 61 aa2.97□□□□□ -1.93
CFTR-201ENST00000003084 FAM236AA0A1B0GUQ0 79 aa2.97□□□□□ -1.93
CFTR-201ENST00000003084 FAM236BA0A1B0GV22 79 aa2.97□□□□□ -1.93
CFTR-201ENST00000003084 C1orf137Q5JT78 98 aa2.97□□□□□ -1.93
CFTR-201ENST00000003084 Q6ZQY7 126 aa2.97□□□□□ -1.93
CFTR-201ENST00000003084 Q8NBF4 154 aa2.97□□□□□ -1.93
CFTR-201ENST00000003084 WWC2-AS2Q96NR7 200 aa2.97□□□□□ -1.93
CFTR-201ENST00000003084 SBSPONQ8IVN8 264 aa2.97□□□□□ -1.93
CFTR-201ENST00000003084 TEX49A0A1B0GTD5 131 aa2.97□□□□□ -1.93
CFTR-201ENST00000003084 LIMD2Q9BT23 127 aa2.97□□□□□ -1.93
CFTR-201ENST00000003084 CDIP1Q9H305 208 aa2.97□□□□□ -1.93
CFTR-201ENST00000003084 KIF25-AS1Q9Y6Z4 181 aa2.97□□□□□ -1.93
CFTR-201ENST00000003084 PCSK5Q92824 1860 aa2.96□□□□□ -1.93
CFTR-201ENST00000003084 FRYLO94915 3013 aa2.96□□□□□ -1.94
CFTR-201ENST00000003084 TPRP12270 2363 aaKnown RBP2.96□□□□□ -1.94
CFTR-201ENST00000003084 NCOA6Q14686 2063 aaPredicted RBP2.96□□□□□ -1.94
CFTR-201ENST00000003084 PKDREJQ9NTG1 2253 aa2.96□□□□□ -1.94
CFTR-201ENST00000003084 A0A096LNT2 108 aa2.96□□□□□ -1.94
CFTR-201ENST00000003084 TRBV10-3A0A0K0K1G6 114 aa2.96□□□□□ -1.94
CFTR-201ENST00000003084 Q8N814 137 aa2.96□□□□□ -1.94
CFTR-201ENST00000003084 OTOGLQ3ZCN5 2332 aa2.96□□□□□ -1.94
CFTR-201ENST00000003084 ABCA4P78363 2273 aa2.96□□□□□ -1.94
CFTR-201ENST00000003084 C2orf91Q6ZV80 131 aa2.96□□□□□ -1.94
CFTR-201ENST00000003084 C3orf84H3BNL1 204 aa2.96□□□□□ -1.94
CFTR-201ENST00000003084 HRCT1Q6UXD1 115 aa2.96□□□□□ -1.94
CFTR-201ENST00000003084 RIF1Q5UIP0 2472 aaKnown RBP2.96□□□□□ -1.94
CFTR-201ENST00000003084 ESRGQ1W209 222 aa2.95□□□□□ -1.94
CFTR-201ENST00000003084 ZFHX4Q86UP3 3567 aa2.95□□□□□ -1.94
CFTR-201ENST00000003084 FREM1Q5H8C1 2179 aa2.95□□□□□ -1.94
CFTR-201ENST00000003084 J3KT08 172 aa2.95□□□□□ -1.94
CFTR-201ENST00000003084 URB1-AS1Q96HZ7 61 aa2.95□□□□□ -1.94
CFTR-201ENST00000003084 CACNA1HO95180 2353 aa2.95□□□□□ -1.94
CFTR-201ENST00000003084 NBDYA0A0U1RRE5 68 aa2.95□□□□□ -1.94
CFTR-201ENST00000003084 ENHOQ6UWT2 76 aa2.95□□□□□ -1.94
CFTR-201ENST00000003084 Q8NAQ8 132 aa2.95□□□□□ -1.94
CFTR-201ENST00000003084 SPTSSBQ8NFR3 76 aa2.95□□□□□ -1.94
CFTR-201ENST00000003084 Q6ZRU5 148 aa2.94□□□□□ -1.94
CFTR-201ENST00000003084 Q9BRP9 147 aa2.94□□□□□ -1.94
CFTR-201ENST00000003084 IMUPQ9GZP8 106 aa2.94□□□□□ -1.94
CFTR-201ENST00000003084 ATP5EP56381 51 aaPredicted RBP2.94□□□□□ -1.94
CFTR-201ENST00000003084 C9orf116Q5BN46 136 aaPredicted RBP2.94□□□□□ -1.94
CFTR-201ENST00000003084 HIVEP2P31629 2446 aa2.94□□□□□ -1.94
CFTR-201ENST00000003084 TRBV7-6A0A0J9YX20 115 aa2.94□□□□□ -1.94
CFTR-201ENST00000003084 SPINK6Q6UWN8 80 aa2.94□□□□□ -1.94
CFTR-201ENST00000003084 CIRBP-AS1Q8TBR5 109 aa2.94□□□□□ -1.94
CFTR-201ENST00000003084 PRR15LQ9BU68 103 aa2.94□□□□□ -1.94
CFTR-201ENST00000003084 COL27A1Q8IZC6 1860 aaPredicted RBP2.93□□□□□ -1.94
CFTR-201ENST00000003084 TET2Q6N021 2002 aaPredicted RBP2.93□□□□□ -1.94
CFTR-201ENST00000003084 NDUFC1O43677 76 aa2.93□□□□□ -1.94
CFTR-201ENST00000003084 C22orf24Q9Y442 160 aa2.93□□□□□ -1.94
CFTR-201ENST00000003084 SDIM1Q6ZPB5 146 aa2.93□□□□□ -1.94
CFTR-201ENST00000003084 SNURFQ9Y675 71 aa2.93□□□□□ -1.94
CFTR-201ENST00000003084 CADP27708 2225 aa2.93□□□□□ -1.94
CFTR-201ENST00000003084 TSPEAR-AS2P59090 65 aa2.93□□□□□ -1.94
CFTR-201ENST00000003084 LINC00315P59091 139 aa2.93□□□□□ -1.94
CFTR-201ENST00000003084 CELSR3Q9NYQ7 3312 aa2.93□□□□□ -1.94
CFTR-201ENST00000003084 NTM-AS1Q6ZSK4 140 aa2.93□□□□□ -1.94
CFTR-201ENST00000003084 SPENQ96T58 3664 aaKnown RBP2.92□□□□□ -1.94
CFTR-201ENST00000003084 RTL8CO15255 209 aa2.92□□□□□ -1.94
CFTR-201ENST00000003084 LINC00575Q6W349 94 aa2.92□□□□□ -1.94
CFTR-201ENST00000003084 SCXQ7RTU7 201 aa2.92□□□□□ -1.94
CFTR-201ENST00000003084 A8MTW9 85 aa2.92□□□□□ -1.94
CFTR-201ENST00000003084 ZFHX3Q15911 3703 aa2.92□□□□□ -1.94
CFTR-201ENST00000003084 SHANK1Q9Y566 2161 aa2.92□□□□□ -1.94
CFTR-201ENST00000003084 UQCRQO14949 82 aa2.92□□□□□ -1.94
CFTR-201ENST00000003084 ADAMTSL4-AS1Q5T5F5 129 aa2.92□□□□□ -1.94
CFTR-201ENST00000003084 LINC00588Q9Y4M8 146 aa2.92□□□□□ -1.94
CFTR-201ENST00000003084 A0A096LNJ9 63 aa2.91□□□□□ -1.94
CFTR-201ENST00000003084 GVQW2A0A096LPI5 108 aaPredicted RBP2.91□□□□□ -1.94
CFTR-201ENST00000003084 DNAH10OSP0CZ25 163 aa2.91□□□□□ -1.94
CFTR-201ENST00000003084 ARFGEF3Q5TH69 2177 aa2.91□□□□□ -1.94
CFTR-201ENST00000003084 A0A087WYN8 130 aa2.91□□□□□ -1.94
CFTR-201ENST00000003084 FAM240AA0A1B0GVK7 77 aa2.91□□□□□ -1.94
CFTR-201ENST00000003084 KRTAP10-11P60412 298 aa2.91□□□□□ -1.94
CFTR-201ENST00000003084 SMCR5Q8TEV8 140 aa2.91□□□□□ -1.94
CFTR-201ENST00000003084 C16orf90A8MZG2 172 aa2.91□□□□□ -1.94
CFTR-201ENST00000003084 KRTAP1-3Q8IUG1 177 aa2.91□□□□□ -1.94
CFTR-201ENST00000003084 C3orf22Q8N5N4 141 aa2.91□□□□□ -1.94
CFTR-201ENST00000003084 CEP250Q9BV73 2442 aa2.91□□□□□ -1.94
CFTR-201ENST00000003084 IGHV3OR16-9A0A0B4J2B5 98 aa2.91□□□□□ -1.94
CFTR-201ENST00000003084 Q6ZRP5 223 aa2.91□□□□□ -1.94
CFTR-201ENST00000003084 WFDC13Q8IUB5 93 aa2.91□□□□□ -1.94
CFTR-201ENST00000003084 TANC2Q9HCD6 1990 aa2.9□□□□□ -1.94
CFTR-201ENST00000003084 A0A1B0GW54 56 aa2.9□□□□□ -1.94
CFTR-201ENST00000003084 K7EIL1 84 aa2.9□□□□□ -1.94
CFTR-201ENST00000003084 FAM19A3Q7Z5A8 133 aa2.9□□□□□ -1.94
CFTR-201ENST00000003084 SMG1Q96Q15 3661 aaKnown RBP2.9□□□□□ -1.94
CFTR-201ENST00000003084 LINC00476Q8WZB0 136 aa2.9□□□□□ -1.95
CFTR-201ENST00000003084 C6orf48Q9UBA6 75 aa2.9□□□□□ -1.95
CFTR-201ENST00000003084 KRTAP10-3P60369 221 aa2.9□□□□□ -1.95
CFTR-201ENST00000003084 PRR3P79522 188 aaKnown RBP2.9□□□□□ -1.95
CFTR-201ENST00000003084 OCR1Q9BZK8 76 aa2.9□□□□□ -1.95
CFTR-201ENST00000003084 FAM236DA0A1B0GTK5 79 aa2.9□□□□□ -1.95
CFTR-201ENST00000003084 FAM236CP0DP71 79 aa2.9□□□□□ -1.95
CFTR-201ENST00000003084 PTPRQQ9UMZ3 2332 aa2.89□□□□□ -1.95
CFTR-201ENST00000003084 NBEAQ8NFP9 2946 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms