RNA–Protein interactions for RNA: ENST00000642072.1

LINC00339-212, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-212ENST00000642072 CSDC2Q9Y534 153 aaKnown RBP5.13□□□□□ -1.59
LINC00339-212ENST00000642072 S100A8P05109 93 aa5.12□□□□□ -1.59
LINC00339-212ENST00000642072 RAB5AP20339 215 aa5.12□□□□□ -1.59
LINC00339-212ENST00000642072 MALP21145 153 aa5.12□□□□□ -1.59
LINC00339-212ENST00000642072 OCC1Q8TAD7 63 aa5.12□□□□□ -1.59
LINC00339-212ENST00000642072 ST20Q9HBF5 79 aa5.12□□□□□ -1.59
LINC00339-212ENST00000642072 A0A087WZ39 114 aa5.11□□□□□ -1.59
LINC00339-212ENST00000642072 C5orf52A6NGY3 159 aa5.11□□□□□ -1.59
LINC00339-212ENST00000642072 SPAG11BQ08648 103 aa5.11□□□□□ -1.59
LINC00339-212ENST00000642072 SMIM15Q7Z3B0 74 aa5.11□□□□□ -1.59
LINC00339-212ENST00000642072 C5orf38Q86SI9 138 aa5.11□□□□□ -1.59
LINC00339-212ENST00000642072 FAM104AQ969W3 186 aa5.11□□□□□ -1.59
LINC00339-212ENST00000642072 MRPL35Q9NZE8 188 aaKnown RBP5.11□□□□□ -1.59
LINC00339-212ENST00000642072 UBE2D4Q9Y2X8 147 aa5.11□□□□□ -1.59
LINC00339-212ENST00000642072 TRAV13-1A0A0B4J241 112 aa5.1□□□□□ -1.59
LINC00339-212ENST00000642072 TLX1NBP0CAT3 122 aa5.1□□□□□ -1.59
LINC00339-212ENST00000642072 SMIM6P0DI80 62 aa5.1□□□□□ -1.59
LINC00339-212ENST00000642072 RPL13AP40429 203 aaKnown RBP5.1□□□□□ -1.59
LINC00339-212ENST00000642072 RNASE13Q5GAN3 156 aaKnown RBP5.1□□□□□ -1.59
LINC00339-212ENST00000642072 C10orf25Q5T742 122 aa5.1□□□□□ -1.59
LINC00339-212ENST00000642072 OR10D4PQ8NGN7 298 aa5.1□□□□□ -1.59
LINC00339-212ENST00000642072 TSKUQ8WUA8 353 aa5.1□□□□□ -1.59
LINC00339-212ENST00000642072 TMEM250H0YL14 139 aa5.09□□□□□ -1.59
LINC00339-212ENST00000642072 S100A6P06703 90 aa5.09□□□□□ -1.59
LINC00339-212ENST00000642072 RAB4AP20338 218 aa5.09□□□□□ -1.59
LINC00339-212ENST00000642072 Q6ZUT4 128 aa5.09□□□□□ -1.59
LINC00339-212ENST00000642072 FAM231DQ6ZW35 169 aa5.09□□□□□ -1.59
LINC00339-212ENST00000642072 FAM19A5Q7Z5A7 132 aaPredicted RBP5.09□□□□□ -1.59
LINC00339-212ENST00000642072 CTDSP1Q9GZU7 261 aa5.09□□□□□ -1.59
LINC00339-212ENST00000642072 TMEM191AQ9H0A3 160 aa5.09□□□□□ -1.59
LINC00339-212ENST00000642072 C6orf48Q9UBA6 75 aa5.09□□□□□ -1.59
LINC00339-212ENST00000642072 IGHV3OR16-9A0A0B4J2B5 98 aa5.08□□□□□ -1.6
LINC00339-212ENST00000642072 F8WDY8 70 aa5.08□□□□□ -1.6
LINC00339-212ENST00000642072 CT83Q5H943 113 aa5.08□□□□□ -1.6
LINC00339-212ENST00000642072 NRACQ8N912 160 aa5.08□□□□□ -1.6
LINC00339-212ENST00000642072 IMMP2LQ96T52 175 aa5.08□□□□□ -1.6
LINC00339-212ENST00000642072 C12orf57Q99622 126 aa5.08□□□□□ -1.6
LINC00339-212ENST00000642072 TIMM21Q9BVV7 248 aa5.08□□□□□ -1.6
LINC00339-212ENST00000642072 TRBV24-1A0A075B6N3 115 aa5.07□□□□□ -1.6
LINC00339-212ENST00000642072 A8MWL6 223 aa5.07□□□□□ -1.6
LINC00339-212ENST00000642072 SMKR1H3BMG3 65 aa5.07□□□□□ -1.6
LINC00339-212ENST00000642072 VCYO14598 125 aa5.07□□□□□ -1.6
LINC00339-212ENST00000642072 UBE2D1P51668 147 aa5.07□□□□□ -1.6
LINC00339-212ENST00000642072 AKR1D1P51857 326 aa5.07□□□□□ -1.6
LINC00339-212ENST00000642072 SNRPEP62304 92 aaKnown RBP5.07□□□□□ -1.6
LINC00339-212ENST00000642072 UNQ6190/PRO20217Q6UXQ8 127 aa5.07□□□□□ -1.6
LINC00339-212ENST00000642072 AMN1Q8IY45 258 aa5.07□□□□□ -1.6
LINC00339-212ENST00000642072 ORAOV1Q8WV07 137 aa5.07□□□□□ -1.6
LINC00339-212ENST00000642072 NAT8Q9UHE5 227 aa5.07□□□□□ -1.6
LINC00339-212ENST00000642072 A0A1B0GUT8 65 aa5.06□□□□□ -1.6
LINC00339-212ENST00000642072 M0QXV9 152 aa5.06□□□□□ -1.6
LINC00339-212ENST00000642072 NDUFA1O15239 70 aa5.06□□□□□ -1.6
LINC00339-212ENST00000642072 GATCO43716 136 aaKnown RBP5.06□□□□□ -1.6
LINC00339-212ENST00000642072 FCER1GP30273 86 aa5.06□□□□□ -1.6
LINC00339-212ENST00000642072 SUMO2P61956 95 aaKnown RBP5.06□□□□□ -1.6
LINC00339-212ENST00000642072 CTAG1AP78358 180 aa5.06□□□□□ -1.6
LINC00339-212ENST00000642072 KIAA0087Q14695 138 aa5.06□□□□□ -1.6
LINC00339-212ENST00000642072 TMEM241Q24JQ0 296 aa5.06□□□□□ -1.6
LINC00339-212ENST00000642072 C9orf129Q5T035 196 aaKnown RBP5.06□□□□□ -1.6
LINC00339-212ENST00000642072 A0A087X002 238 aa5.05□□□□□ -1.6
LINC00339-212ENST00000642072 ZNF727A8MUV8 499 aa5.05□□□□□ -1.6
LINC00339-212ENST00000642072 HIGD1CA8MV81 97 aa5.05□□□□□ -1.6
LINC00339-212ENST00000642072 ZNF861PO60384 105 aa5.05□□□□□ -1.6
LINC00339-212ENST00000642072 FABP9Q0Z7S8 132 aa5.05□□□□□ -1.6
LINC00339-212ENST00000642072 GAGE2EQ4V326 116 aa5.05□□□□□ -1.6
LINC00339-212ENST00000642072 ANAPC16Q96DE5 110 aa5.05□□□□□ -1.6
LINC00339-212ENST00000642072 GAGE2DQ9UEU5 116 aa5.05□□□□□ -1.6
LINC00339-212ENST00000642072 TSPAN13O95857 204 aa5.04□□□□□ -1.6
LINC00339-212ENST00000642072 RPL39P62891 51 aaKnown RBP5.04□□□□□ -1.6
LINC00339-212ENST00000642072 UBE2BP63146 152 aa5.04□□□□□ -1.6
LINC00339-212ENST00000642072 SMAGPQ0VAQ4 97 aa5.04□□□□□ -1.6
LINC00339-212ENST00000642072 KIR2DL4Q99706 377 aa5.04□□□□□ -1.6
LINC00339-212ENST00000642072 PPP1R17O96001 155 aa5.03□□□□□ -1.6
LINC00339-212ENST00000642072 S100PP25815 95 aa5.03□□□□□ -1.6
LINC00339-212ENST00000642072 RPL23P62829 140 aaKnown RBP5.03□□□□□ -1.6
LINC00339-212ENST00000642072 RPL32P62910 135 aaKnown RBP5.03□□□□□ -1.6
LINC00339-212ENST00000642072 MRPS36P82909 103 aaKnown RBP5.03□□□□□ -1.6
LINC00339-212ENST00000642072 COA6Q5JTJ3 125 aaKnown RBP5.03□□□□□ -1.6
LINC00339-212ENST00000642072 LINC01551Q86U37 167 aa5.03□□□□□ -1.6
LINC00339-212ENST00000642072 BORCS7Q96B45 105 aa5.03□□□□□ -1.6
LINC00339-212ENST00000642072 SMIM7Q9BQ49 75 aa5.03□□□□□ -1.6
LINC00339-212ENST00000642072 TGIF2-C20orf24A0A0A6YYL0 155 aa5.02□□□□□ -1.61
LINC00339-212ENST00000642072 TRBV30A0A0K0K1B3 111 aa5.02□□□□□ -1.61
LINC00339-212ENST00000642072 NDUFC2-KCTD14E9PQ53 114 aa5.02□□□□□ -1.61
LINC00339-212ENST00000642072 PPP1R2P9O14990 202 aa5.02□□□□□ -1.61
LINC00339-212ENST00000642072 HIST1H2BKO60814 126 aa5.02□□□□□ -1.61
LINC00339-212ENST00000642072 HIST1H2BJP06899 126 aa5.02□□□□□ -1.61
LINC00339-212ENST00000642072 HIST1H2BOP23527 126 aa5.02□□□□□ -1.61
LINC00339-212ENST00000642072 HIST1H2BBP33778 126 aa5.02□□□□□ -1.61
LINC00339-212ENST00000642072 CEBPGP53567 150 aa5.02□□□□□ -1.61
LINC00339-212ENST00000642072 HIST1H2BDP58876 126 aa5.02□□□□□ -1.61
LINC00339-212ENST00000642072 HIST1H2BCP62807 126 aa5.02□□□□□ -1.61
LINC00339-212ENST00000642072 HIST2H2BEQ16778 126 aa5.02□□□□□ -1.61
LINC00339-212ENST00000642072 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.02□□□□□ -1.61
LINC00339-212ENST00000642072 C2orf82Q6UX34 121 aa5.02□□□□□ -1.61
LINC00339-212ENST00000642072 HIST1H2BHQ93079 126 aa5.02□□□□□ -1.61
LINC00339-212ENST00000642072 HIST1H2BNQ99877 126 aa5.02□□□□□ -1.61
LINC00339-212ENST00000642072 HIST1H2BMQ99879 126 aa5.02□□□□□ -1.61
LINC00339-212ENST00000642072 SPANXA1Q9NS26 97 aa5.02□□□□□ -1.61
LINC00339-212ENST00000642072 TRAV9-1A0A075B6T8 112 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms