RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 TSHBP01222 138 aa4.59□□□□□ -1.67
SCARB2-226ENST00000640916 ESDP10768 282 aa4.59□□□□□ -1.67
SCARB2-226ENST00000640916 SS18Q15532 418 aa4.59□□□□□ -1.67
SCARB2-226ENST00000640916 AMMECR1LQ6DCA0 310 aa4.59□□□□□ -1.67
SCARB2-226ENST00000640916 EIF5AL1Q6IS14 154 aaKnown RBP4.59□□□□□ -1.67
SCARB2-226ENST00000640916 AKAP14Q86UN6 197 aa4.59□□□□□ -1.67
SCARB2-226ENST00000640916 FMC1Q96HJ9 113 aa4.59□□□□□ -1.67
SCARB2-226ENST00000640916 C2orf48Q96LS8 159 aa4.59□□□□□ -1.67
SCARB2-226ENST00000640916 MAP1LC3CQ9BXW4 147 aa4.59□□□□□ -1.67
SCARB2-226ENST00000640916 SSPOA2VEC9 5147 aa4.58□□□□□ -1.68
SCARB2-226ENST00000640916 C19orf71A6NCJ1 209 aa4.58□□□□□ -1.68
SCARB2-226ENST00000640916 H7C423 109 aa4.58□□□□□ -1.68
SCARB2-226ENST00000640916 ZNF726P1Q15940 193 aa4.58□□□□□ -1.68
SCARB2-226ENST00000640916 LINC00242Q5T6M2 205 aa4.58□□□□□ -1.68
SCARB2-226ENST00000640916 LINC00304Q8N9R0 145 aa4.58□□□□□ -1.68
SCARB2-226ENST00000640916 TNFSF18Q9UNG2 199 aa4.58□□□□□ -1.68
SCARB2-226ENST00000640916 A0A1B0GV50 99 aa4.57□□□□□ -1.68
SCARB2-226ENST00000640916 M0QXV9 152 aa4.57□□□□□ -1.68
SCARB2-226ENST00000640916 TLX1NBP0CAT3 122 aa4.57□□□□□ -1.68
SCARB2-226ENST00000640916 RAB14P61106 215 aa4.57□□□□□ -1.68
SCARB2-226ENST00000640916 C10orf25Q5T742 122 aa4.57□□□□□ -1.68
SCARB2-226ENST00000640916 FCGBPQ9Y6R7 5405 aaPredicted RBP4.56□□□□□ -1.68
SCARB2-226ENST00000640916 BORCS7-ASMTA0A0B4J1R7 106 aa4.56□□□□□ -1.68
SCARB2-226ENST00000640916 LOC105371267A0A1B0GV96 52 aa4.56□□□□□ -1.68
SCARB2-226ENST00000640916 IGLC6P0CF74 106 aa4.56□□□□□ -1.68
SCARB2-226ENST00000640916 ZNF25P17030 456 aaPredicted RBP4.56□□□□□ -1.68
SCARB2-226ENST00000640916 SEC61BP60468 96 aaKnown RBP4.56□□□□□ -1.68
SCARB2-226ENST00000640916 UBE2G1P62253 170 aa4.56□□□□□ -1.68
SCARB2-226ENST00000640916 UBE2BP63146 152 aa4.56□□□□□ -1.68
SCARB2-226ENST00000640916 CYTL1Q9NRR1 136 aa4.56□□□□□ -1.68
SCARB2-226ENST00000640916 CDC42SE2Q9NRR3 84 aa4.56□□□□□ -1.68
SCARB2-226ENST00000640916 MRPL35Q9NZE8 188 aaKnown RBP4.56□□□□□ -1.68
SCARB2-226ENST00000640916 USH2AO75445 5202 aa4.56□□□□□ -1.68
SCARB2-226ENST00000640916 FLGP20930 4061 aaPredicted RBP4.56□□□□□ -1.68
SCARB2-226ENST00000640916 COX7A2LO14548 114 aa4.55□□□□□ -1.68
SCARB2-226ENST00000640916 NCR2O95944 276 aa4.55□□□□□ -1.68
SCARB2-226ENST00000640916 PMCHP20382 165 aa4.55□□□□□ -1.68
SCARB2-226ENST00000640916 BOD1L2Q8IYS8 172 aa4.55□□□□□ -1.68
SCARB2-226ENST00000640916 GATD1Q8NB37 220 aa4.55□□□□□ -1.68
SCARB2-226ENST00000640916 PSMG3Q9BT73 122 aaPredicted RBP4.55□□□□□ -1.68
SCARB2-226ENST00000640916 NKX6-2Q9C056 277 aaPredicted RBP4.55□□□□□ -1.68
SCARB2-226ENST00000640916 ACTR3CQ9C0K3 210 aaPredicted RBP4.55□□□□□ -1.68
SCARB2-226ENST00000640916 C9orf129Q5T035 196 aaKnown RBP4.54□□□□□ -1.68
SCARB2-226ENST00000640916 AKR1C8PQ5T2L2 129 aa4.54□□□□□ -1.68
SCARB2-226ENST00000640916 LINC00337Q8N6G1 96 aa4.54□□□□□ -1.68
SCARB2-226ENST00000640916 RPL39LQ96EH5 51 aaKnown RBP4.54□□□□□ -1.68
SCARB2-226ENST00000640916 SMDT1Q9H4I9 107 aa4.54□□□□□ -1.68
SCARB2-226ENST00000640916 C6orf48Q9UBA6 75 aa4.54□□□□□ -1.68
SCARB2-226ENST00000640916 SYNE2Q8WXH0 6885 aaKnown RBP4.54□□□□□ -1.68
SCARB2-226ENST00000640916 MAP1LC3B2A6NCE7 125 aa4.53□□□□□ -1.68
SCARB2-226ENST00000640916 PFDN1O60925 122 aa4.53□□□□□ -1.68
SCARB2-226ENST00000640916 APCSP02743 223 aa4.53□□□□□ -1.68
SCARB2-226ENST00000640916 CEBPGP53567 150 aa4.53□□□□□ -1.68
SCARB2-226ENST00000640916 SERF2P84101 59 aa4.53□□□□□ -1.68
SCARB2-226ENST00000640916 SPAG11BQ08648 103 aa4.53□□□□□ -1.68
SCARB2-226ENST00000640916 FAM74A3Q4VXF1 159 aa4.53□□□□□ -1.68
SCARB2-226ENST00000640916 C5orf38Q86SI9 138 aa4.53□□□□□ -1.68
SCARB2-226ENST00000640916 KCNRGQ8N5I3 272 aa4.53□□□□□ -1.68
SCARB2-226ENST00000640916 FAM213BQ8TBF2 198 aa4.53□□□□□ -1.68
SCARB2-226ENST00000640916 IMMP2LQ96T52 175 aa4.53□□□□□ -1.68
SCARB2-226ENST00000640916 MAP1LC3BQ9GZQ8 125 aa4.53□□□□□ -1.68
SCARB2-226ENST00000640916 CTXND1A0A1B0GTU2 59 aa4.52□□□□□ -1.69
SCARB2-226ENST00000640916 KANTRA0A1W2PQU2 76 aa4.52□□□□□ -1.69
SCARB2-226ENST00000640916 NUPR1O60356 82 aa4.52□□□□□ -1.69
SCARB2-226ENST00000640916 UNQ6190/PRO20217Q6UXQ8 127 aa4.52□□□□□ -1.69
SCARB2-226ENST00000640916 TMUB2Q71RG4 321 aa4.52□□□□□ -1.69
SCARB2-226ENST00000640916 FP248Q71RG6 208 aaPredicted RBP4.52□□□□□ -1.69
SCARB2-226ENST00000640916 MRPL52Q86TS9 123 aaKnown RBP4.52□□□□□ -1.69
SCARB2-226ENST00000640916 OR2D3Q8NGH3 330 aa4.52□□□□□ -1.69
SCARB2-226ENST00000640916 TMEM101Q96IK0 257 aa4.52□□□□□ -1.69
SCARB2-226ENST00000640916 MACF1Q9UPN3 7388 aaKnown RBP4.52□□□□□ -1.69
SCARB2-226ENST00000640916 A0A1B0GVG6 124 aa4.51□□□□□ -1.69
SCARB2-226ENST00000640916 C1orf196B1AJZ1 125 aa4.51□□□□□ -1.69
SCARB2-226ENST00000640916 AKR1C3P42330 323 aa4.51□□□□□ -1.69
SCARB2-226ENST00000640916 FAM229BQ4G0N7 80 aa4.51□□□□□ -1.69
SCARB2-226ENST00000640916 PAPPA-AS1Q5QFB9 102 aa4.51□□□□□ -1.69
SCARB2-226ENST00000640916 BAGE2Q86Y30 109 aa4.51□□□□□ -1.69
SCARB2-226ENST00000640916 LINC00518Q8N0U6 118 aa4.51□□□□□ -1.69
SCARB2-226ENST00000640916 BTF3L4Q96K17 158 aa4.51□□□□□ -1.69
SCARB2-226ENST00000640916 SDHAF1A6NFY7 115 aa4.5□□□□□ -1.69
SCARB2-226ENST00000640916 HMSDA8MTL9 139 aa4.5□□□□□ -1.69
SCARB2-226ENST00000640916 CTRLP40313 264 aa4.5□□□□□ -1.69
SCARB2-226ENST00000640916 ZNF345Q14585 488 aa4.5□□□□□ -1.69
SCARB2-226ENST00000640916 KRTAP13-1Q8IUC0 172 aa4.5□□□□□ -1.69
SCARB2-226ENST00000640916 OR10D4PQ8NGN7 298 aa4.5□□□□□ -1.69
SCARB2-226ENST00000640916 SFT2D1Q8WV19 159 aa4.5□□□□□ -1.69
SCARB2-226ENST00000640916 TCEAL7Q9BRU2 100 aa4.5□□□□□ -1.69
SCARB2-226ENST00000640916 NDUFA1O15239 70 aa4.49□□□□□ -1.69
SCARB2-226ENST00000640916 BCE1O60756 84 aa4.49□□□□□ -1.69
SCARB2-226ENST00000640916 HSBP1O75506 76 aa4.49□□□□□ -1.69
SCARB2-226ENST00000640916 TRGC1P0CF51 173 aa4.49□□□□□ -1.69
SCARB2-226ENST00000640916 RPL28P46779 137 aaKnown RBP4.49□□□□□ -1.69
SCARB2-226ENST00000640916 CCL20P78556 96 aa4.49□□□□□ -1.69
SCARB2-226ENST00000640916 TMEM241Q24JQ0 296 aa4.49□□□□□ -1.69
SCARB2-226ENST00000640916 RNASE13Q5GAN3 156 aaKnown RBP4.49□□□□□ -1.69
SCARB2-226ENST00000640916 LYZL1Q6UWQ5 148 aa4.49□□□□□ -1.69
SCARB2-226ENST00000640916 RNASE7Q9H1E1 156 aaKnown RBP4.49□□□□□ -1.69
SCARB2-226ENST00000640916 C22orf24Q9Y442 160 aa4.49□□□□□ -1.69
SCARB2-226ENST00000640916 TRAV13-1A0A0B4J241 112 aa4.48□□□□□ -1.69
SCARB2-226ENST00000640916 KRTAP4-16G5E9R7 235 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms