RNA–Protein interactions for RNA: ENST00000639394.1

PAX6-256, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 1,988 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-256	ENST00000639394	NBAS	A2RRP1	2371 aa		7.67	□□□□□ -1.18
PAX6-256	ENST00000639394	MGP	P08493	103 aa		7.67	□□□□□ -1.18
PAX6-256	ENST00000639394	C9orf116	Q5BN46	136 aa	Predicted RBP	7.67	□□□□□ -1.18
PAX6-256	ENST00000639394	LENEP	Q9Y5L5	61 aa		7.67	□□□□□ -1.18
PAX6-256	ENST00000639394	RELN	P78509	3460 aa		7.67	□□□□□ -1.18
PAX6-256	ENST00000639394	SMG1	Q96Q15	3661 aa	Known RBP	7.66	□□□□□ -1.18
PAX6-256	ENST00000639394	IGHV1OR15-1	A0A075B7D0	117 aa		7.66	□□□□□ -1.18
PAX6-256	ENST00000639394		A0A0A0MQY5	61 aa		7.66	□□□□□ -1.18
PAX6-256	ENST00000639394	IGKV1-16	P04430	117 aa		7.66	□□□□□ -1.18
PAX6-256	ENST00000639394	LINC01356	Q8N9X3	169 aa		7.66	□□□□□ -1.18
PAX6-256	ENST00000639394		X6R8D5	127 aa		7.66	□□□□□ -1.18
PAX6-256	ENST00000639394	HIVEP3	Q5T1R4	2406 aa		7.66	□□□□□ -1.18
PAX6-256	ENST00000639394	CAD	P27708	2225 aa		7.66	□□□□□ -1.18
PAX6-256	ENST00000639394	IGLV4-3	A0A075B6K6	122 aa		7.66	□□□□□ -1.18
PAX6-256	ENST00000639394		A0A087WYN8	130 aa		7.66	□□□□□ -1.18
PAX6-256	ENST00000639394	C3orf84	H3BNL1	204 aa		7.66	□□□□□ -1.18
PAX6-256	ENST00000639394		H3BQ85	93 aa		7.66	□□□□□ -1.18
PAX6-256	ENST00000639394	IGHV3OR16-9	A0A0B4J2B5	98 aa		7.65	□□□□□ -1.18
PAX6-256	ENST00000639394	ELOF1	P60002	83 aa	Known RBP	7.65	□□□□□ -1.18
PAX6-256	ENST00000639394	C20orf203	Q8NBC4	194 aa		7.65	□□□□□ -1.18
PAX6-256	ENST00000639394	C11orf72	Q8NBR9	251 aa		7.65	□□□□□ -1.18
PAX6-256	ENST00000639394	IGKV1-17	P01599	117 aa		7.64	□□□□□ -1.19
PAX6-256	ENST00000639394	HAMP	P81172	84 aa		7.64	□□□□□ -1.19
PAX6-256	ENST00000639394	OCR1	Q9BZK8	76 aa		7.64	□□□□□ -1.19
PAX6-256	ENST00000639394	LINC00574	Q9H8X3	128 aa		7.64	□□□□□ -1.19
PAX6-256	ENST00000639394	IGHV3-64D	A0A0J9YX35	117 aa		7.64	□□□□□ -1.19
PAX6-256	ENST00000639394	IGKV2-29	A2NJV5	120 aa	Predicted RBP	7.64	□□□□□ -1.19
PAX6-256	ENST00000639394	C19orf84	I3L1E1	186 aa		7.64	□□□□□ -1.19
PAX6-256	ENST00000639394	C11orf21	Q9P2W6	132 aa		7.64	□□□□□ -1.19
PAX6-256	ENST00000639394	CFAP46	Q8IYW2	2715 aa		7.64	□□□□□ -1.19
PAX6-256	ENST00000639394	LOC101927531	A0A1B0GV80	90 aa		7.63	□□□□□ -1.19
PAX6-256	ENST00000639394	LECT2	O14960	151 aa		7.63	□□□□□ -1.19
PAX6-256	ENST00000639394	IGHV1-46	P01743	117 aa		7.63	□□□□□ -1.19
PAX6-256	ENST00000639394	RPL27A	P46776	148 aa	Known RBP	7.63	□□□□□ -1.19
PAX6-256	ENST00000639394	EPG5	Q9HCE0	2579 aa		7.63	□□□□□ -1.19
PAX6-256	ENST00000639394		K7EQG2	157 aa		7.62	□□□□□ -1.19
PAX6-256	ENST00000639394	C17orf58	Q2M2W7	97 aa		7.62	□□□□□ -1.19
PAX6-256	ENST00000639394	ZNF580	Q9UK33	172 aa		7.62	□□□□□ -1.19
PAX6-256	ENST00000639394	ADGRG4	Q8IZF6	3080 aa		7.62	□□□□□ -1.19
PAX6-256	ENST00000639394	TRBV10-1	A0A0K0K1A3	114 aa		7.62	□□□□□ -1.19
PAX6-256	ENST00000639394	LCE6A	A0A183	80 aa		7.62	□□□□□ -1.19
PAX6-256	ENST00000639394		I3L2K1	104 aa		7.62	□□□□□ -1.19
PAX6-256	ENST00000639394	NDUFB1	O75438	58 aa		7.62	□□□□□ -1.19
PAX6-256	ENST00000639394	CDC42SE2	Q9NRR3	84 aa		7.62	□□□□□ -1.19
PAX6-256	ENST00000639394		A6NED7	52 aa		7.61	□□□□□ -1.19
PAX6-256	ENST00000639394		Q6ZQT0	140 aa		7.6	□□□□□ -1.19
PAX6-256	ENST00000639394	ZFYVE26	Q68DK2	2539 aa		7.6	□□□□□ -1.19
PAX6-256	ENST00000639394	PLCE1	Q9P212	2302 aa		7.6	□□□□□ -1.19
PAX6-256	ENST00000639394	ARFGEF3	Q5TH69	2177 aa		7.6	□□□□□ -1.19
PAX6-256	ENST00000639394	IGLV5-45	A0A087WSX0	123 aa		7.6	□□□□□ -1.19
PAX6-256	ENST00000639394		A8MU10	97 aa		7.6	□□□□□ -1.19
PAX6-256	ENST00000639394	C9orf47	Q6ZRZ4	202 aa		7.6	□□□□□ -1.19
PAX6-256	ENST00000639394	SMIM11B	Q8TCY0	68 aa		7.6	□□□□□ -1.19
PAX6-256	ENST00000639394	KMT2B	Q9UMN6	2715 aa	Predicted RBP	7.59	□□□□□ -1.19
PAX6-256	ENST00000639394	LRCOL1	A6NCL2	159 aa		7.59	□□□□□ -1.19
PAX6-256	ENST00000639394	SRRM5	B3KS81	715 aa		7.59	□□□□□ -1.19
PAX6-256	ENST00000639394	LY6H	O94772	140 aa		7.59	□□□□□ -1.19
PAX6-256	ENST00000639394	RPL36A	P83881	106 aa	Known RBP	7.59	□□□□□ -1.19
PAX6-256	ENST00000639394	C6orf99	Q4VX62	202 aa		7.59	□□□□□ -1.19
PAX6-256	ENST00000639394	LEAP2	Q969E1	77 aa		7.59	□□□□□ -1.19
PAX6-256	ENST00000639394	RPL36AL	Q969Q0	106 aa	Known RBP	7.59	□□□□□ -1.19
PAX6-256	ENST00000639394	ANKHD1	Q8IWZ3	2542 aa	Known RBP	7.59	□□□□□ -1.19
PAX6-256	ENST00000639394		A0A1W2PPR1	153 aa		7.59	□□□□□ -1.2
PAX6-256	ENST00000639394	IGLV2-23	P01705	113 aa		7.59	□□□□□ -1.2
PAX6-256	ENST00000639394	PRR3	P79522	188 aa	Known RBP	7.59	□□□□□ -1.2
PAX6-256	ENST00000639394	MOBP	Q13875	183 aa		7.59	□□□□□ -1.2
PAX6-256	ENST00000639394	C18orf65	Q6ZTR6	163 aa		7.59	□□□□□ -1.2
PAX6-256	ENST00000639394		Q8N9P0	234 aa	Predicted RBP	7.59	□□□□□ -1.2
PAX6-256	ENST00000639394	ARHGAP32	A7KAX9	2087 aa		7.58	□□□□□ -1.2
PAX6-256	ENST00000639394	PLA2G1B	P04054	148 aa	Known RBP	7.58	□□□□□ -1.2
PAX6-256	ENST00000639394	LINC00315	P59091	139 aa		7.58	□□□□□ -1.2
PAX6-256	ENST00000639394	C19orf54	Q5BKX5	351 aa		7.58	□□□□□ -1.2
PAX6-256	ENST00000639394	C10orf55	Q5SWW7	151 aa		7.58	□□□□□ -1.2
PAX6-256	ENST00000639394	IGFL4	Q6B9Z1	124 aa		7.58	□□□□□ -1.2
PAX6-256	ENST00000639394	SCX	Q7RTU7	201 aa		7.58	□□□□□ -1.2
PAX6-256	ENST00000639394	HIGD2A	Q9BW72	106 aa		7.58	□□□□□ -1.2
PAX6-256	ENST00000639394	C9orf66	Q5T8R8	295 aa		7.57	□□□□□ -1.2
PAX6-256	ENST00000639394	SUMO4	Q6EEV6	95 aa		7.57	□□□□□ -1.2
PAX6-256	ENST00000639394	C11orf71	Q6IPW1	123 aa		7.57	□□□□□ -1.2
PAX6-256	ENST00000639394	IGLV5-39	A0A0G2JS06	123 aa		7.57	□□□□□ -1.2
PAX6-256	ENST00000639394	PRR15L	Q9BU68	103 aa		7.57	□□□□□ -1.2
PAX6-256	ENST00000639394	ZNF462	Q96JM2	2506 aa		7.57	□□□□□ -1.2
PAX6-256	ENST00000639394	ICE1	Q9Y2F5	2266 aa		7.56	□□□□□ -1.2
PAX6-256	ENST00000639394	CASC2	Q6XLA1	102 aa		7.56	□□□□□ -1.2
PAX6-256	ENST00000639394	SPTBN1	Q01082	2364 aa	Known RBP	7.56	□□□□□ -1.2
PAX6-256	ENST00000639394	TFF1	P04155	84 aa		7.55	□□□□□ -1.2
PAX6-256	ENST00000639394	FAM74A4	Q5TZK3	123 aa		7.55	□□□□□ -1.2
PAX6-256	ENST00000639394		Q9BRP9	147 aa		7.55	□□□□□ -1.2
PAX6-256	ENST00000639394	ROS1	P08922	2347 aa		7.55	□□□□□ -1.2
PAX6-256	ENST00000639394	ZCCHC13	Q8WW36	166 aa	Known RBP	7.55	□□□□□ -1.2
PAX6-256	ENST00000639394	IGHV6-1	A0A0B4J1U7	121 aa		7.54	□□□□□ -1.2
PAX6-256	ENST00000639394	PLA2G2A	P14555	144 aa		7.54	□□□□□ -1.2
PAX6-256	ENST00000639394	CELA1	Q9UNI1	258 aa		7.54	□□□□□ -1.2
PAX6-256	ENST00000639394	DOPEY1	Q5JWR5	2465 aa		7.54	□□□□□ -1.2
PAX6-256	ENST00000639394	DEFB114	Q30KQ6	69 aa		7.53	□□□□□ -1.2
PAX6-256	ENST00000639394	ZNF706	Q9Y5V0	76 aa	Predicted RBP	7.53	□□□□□ -1.2
PAX6-256	ENST00000639394	PKDREJ	Q9NTG1	2253 aa		7.53	□□□□□ -1.2
PAX6-256	ENST00000639394	IGHV3-21	A0A0B4J1V1	117 aa		7.53	□□□□□ -1.2
PAX6-256	ENST00000639394	DEFB108B	Q8NET1	73 aa		7.53	□□□□□ -1.2
PAX6-256	ENST00000639394	GAFA1	Q96PS6	74 aa		7.53	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 172.2 ms