RNA–Protein interactions for RNA: ENST00000636221.1

SMARCA2-248, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-248ENST00000636221 HIST1H2BCP62807 126 aa2.66□□□□□ -1.98
SMARCA2-248ENST00000636221 COX6A2Q02221 97 aa2.66□□□□□ -1.98
SMARCA2-248ENST00000636221 PMVKQ15126 192 aa2.66□□□□□ -1.98
SMARCA2-248ENST00000636221 HIST2H2BEQ16778 126 aa2.66□□□□□ -1.98
SMARCA2-248ENST00000636221 LINC01620Q4KN68 170 aa2.66□□□□□ -1.98
SMARCA2-248ENST00000636221 PDZD11Q5EBL8 140 aa2.66□□□□□ -1.98
SMARCA2-248ENST00000636221 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.66□□□□□ -1.98
SMARCA2-248ENST00000636221 LINC00242Q5T6M2 205 aa2.66□□□□□ -1.98
SMARCA2-248ENST00000636221 LINC00173Q6ZV60 143 aa2.66□□□□□ -1.98
SMARCA2-248ENST00000636221 HIST1H2BHQ93079 126 aa2.66□□□□□ -1.98
SMARCA2-248ENST00000636221 IFI27L1Q96BM0 104 aa2.66□□□□□ -1.98
SMARCA2-248ENST00000636221 LINC00526Q96FQ7 95 aa2.66□□□□□ -1.98
SMARCA2-248ENST00000636221 AMELXQ99217 191 aa2.66□□□□□ -1.98
SMARCA2-248ENST00000636221 HIST1H2BNQ99877 126 aa2.66□□□□□ -1.98
SMARCA2-248ENST00000636221 HIST1H2BMQ99879 126 aa2.66□□□□□ -1.98
SMARCA2-248ENST00000636221 CST9LQ9H4G1 147 aa2.66□□□□□ -1.98
SMARCA2-248ENST00000636221 RYR3Q15413 4870 aa2.66□□□□□ -1.98
SMARCA2-248ENST00000636221 IGLV4-69A0A075B6H9 119 aa2.65□□□□□ -1.99
SMARCA2-248ENST00000636221 LEPROTL1O95214 131 aa2.65□□□□□ -1.99
SMARCA2-248ENST00000636221 LINC00310P59036 64 aa2.65□□□□□ -1.99
SMARCA2-248ENST00000636221 HERVK_113P63121 156 aa2.65□□□□□ -1.99
SMARCA2-248ENST00000636221 SEC11AP67812 179 aa2.65□□□□□ -1.99
SMARCA2-248ENST00000636221 CDPF1Q6NVV7 123 aa2.65□□□□□ -1.99
SMARCA2-248ENST00000636221 LINC00469Q8N7U9 141 aa2.65□□□□□ -1.99
SMARCA2-248ENST00000636221 C15orf56Q8N910 161 aa2.65□□□□□ -1.99
SMARCA2-248ENST00000636221 NTN5Q8WTR8 489 aaPredicted RBP2.65□□□□□ -1.99
SMARCA2-248ENST00000636221 ORAOV1Q8WV07 137 aa2.65□□□□□ -1.99
SMARCA2-248ENST00000636221 PACRGQ96M98 296 aaPredicted RBP2.65□□□□□ -1.99
SMARCA2-248ENST00000636221 TOMM7Q9P0U1 55 aa2.65□□□□□ -1.99
SMARCA2-248ENST00000636221 CHTOPQ9Y3Y2 248 aaKnown RBP2.65□□□□□ -1.99
SMARCA2-248ENST00000636221 DNAH10Q8IVF4 4471 aa2.65□□□□□ -1.99
SMARCA2-248ENST00000636221 PKD1P98161 4303 aa2.64□□□□□ -1.99
SMARCA2-248ENST00000636221 IGHV3-64A0A075B6Q5 118 aa2.64□□□□□ -1.99
SMARCA2-248ENST00000636221 A0A087WZ39 114 aa2.64□□□□□ -1.99
SMARCA2-248ENST00000636221 GVQW2A0A096LPI5 108 aaPredicted RBP2.64□□□□□ -1.99
SMARCA2-248ENST00000636221 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.64□□□□□ -1.99
SMARCA2-248ENST00000636221 IGHV3OR16-9A0A0B4J2B5 98 aa2.64□□□□□ -1.99
SMARCA2-248ENST00000636221 TINCRA0A1B0GVN0 87 aa2.64□□□□□ -1.99
SMARCA2-248ENST00000636221 H3BRM9 83 aa2.64□□□□□ -1.99
SMARCA2-248ENST00000636221 S100A6P06703 90 aa2.64□□□□□ -1.99
SMARCA2-248ENST00000636221 PRSS2P07478 247 aa2.64□□□□□ -1.99
SMARCA2-248ENST00000636221 SPINK8P0C7L1 97 aa2.64□□□□□ -1.99
SMARCA2-248ENST00000636221 KRTAP10-1P60331 282 aa2.64□□□□□ -1.99
SMARCA2-248ENST00000636221 SPAG11BQ08648 103 aa2.64□□□□□ -1.99
SMARCA2-248ENST00000636221 SYCNQ0VAF6 134 aa2.64□□□□□ -1.99
SMARCA2-248ENST00000636221 TMEM170BQ5T4T1 132 aa2.64□□□□□ -1.99
SMARCA2-248ENST00000636221 FAM19A3Q7Z5A8 133 aa2.64□□□□□ -1.99
SMARCA2-248ENST00000636221 OR10D4PQ8NGN7 298 aa2.64□□□□□ -1.99
SMARCA2-248ENST00000636221 DPH3Q96FX2 82 aa2.64□□□□□ -1.99
SMARCA2-248ENST00000636221 CAMK2N2Q96S95 79 aa2.64□□□□□ -1.99
SMARCA2-248ENST00000636221 PMCHL2Q9BQD1 86 aa2.64□□□□□ -1.99
SMARCA2-248ENST00000636221 CHAC1Q9BUX1 264 aa2.64□□□□□ -1.99
SMARCA2-248ENST00000636221 CDKN2A-AS1Q9UH64 79 aa2.64□□□□□ -1.99
SMARCA2-248ENST00000636221 HSPB8Q9UJY1 196 aa2.64□□□□□ -1.99
SMARCA2-248ENST00000636221 HECTD4Q9Y4D8 3996 aa2.64□□□□□ -1.99
SMARCA2-248ENST00000636221 DNAH2Q9P225 4427 aa2.64□□□□□ -1.99
SMARCA2-248ENST00000636221 DNAH17Q9UFH2 4485 aa2.64□□□□□ -1.99
SMARCA2-248ENST00000636221 PKHD1P08F94 4074 aa2.63□□□□□ -1.99
SMARCA2-248ENST00000636221 TRAV12-1A0A0B4J245 112 aa2.63□□□□□ -1.99
SMARCA2-248ENST00000636221 C11orf86A6NJI1 115 aa2.63□□□□□ -1.99
SMARCA2-248ENST00000636221 SLPIP03973 132 aa2.63□□□□□ -1.99
SMARCA2-248ENST00000636221 IGLC3P0DOY3 106 aa2.63□□□□□ -1.99
SMARCA2-248ENST00000636221 S100A2P29034 98 aa2.63□□□□□ -1.99
SMARCA2-248ENST00000636221 CKS1BP61024 79 aa2.63□□□□□ -1.99
SMARCA2-248ENST00000636221 HAMPP81172 84 aa2.63□□□□□ -1.99
SMARCA2-248ENST00000636221 C6orf226Q5I0X4 101 aa2.63□□□□□ -1.99
SMARCA2-248ENST00000636221 C2orf82Q6UX34 121 aa2.63□□□□□ -1.99
SMARCA2-248ENST00000636221 UNQ6190/PRO20217Q6UXQ8 127 aa2.63□□□□□ -1.99
SMARCA2-248ENST00000636221 CARD19Q96LW7 228 aa2.63□□□□□ -1.99
SMARCA2-248ENST00000636221 MAP1LC3CQ9BXW4 147 aa2.63□□□□□ -1.99
SMARCA2-248ENST00000636221 MRPL35Q9NZE8 188 aaKnown RBP2.63□□□□□ -1.99
SMARCA2-248ENST00000636221 FAT2Q9NYQ8 4349 aa2.63□□□□□ -1.99
SMARCA2-248ENST00000636221 IGLV5-45A0A087WSX0 123 aa2.62□□□□□ -1.99
SMARCA2-248ENST00000636221 IGKV2-24A0A0C4DH68 120 aa2.62□□□□□ -1.99
SMARCA2-248ENST00000636221 SMIM1B2RUZ4 78 aa2.62□□□□□ -1.99
SMARCA2-248ENST00000636221 F8VRH5 84 aa2.62□□□□□ -1.99
SMARCA2-248ENST00000636221 NDUFA1O15239 70 aa2.62□□□□□ -1.99
SMARCA2-248ENST00000636221 ZNF22P17026 224 aaPredicted RBP2.62□□□□□ -1.99
SMARCA2-248ENST00000636221 KRTDAPP60985 99 aa2.62□□□□□ -1.99
SMARCA2-248ENST00000636221 CNBPP62633 177 aaKnown RBP2.62□□□□□ -1.99
SMARCA2-248ENST00000636221 ODF1Q14990 250 aa2.62□□□□□ -1.99
SMARCA2-248ENST00000636221 COA6Q5JTJ3 125 aaKnown RBP2.62□□□□□ -1.99
SMARCA2-248ENST00000636221 Q6ZRU5 148 aa2.62□□□□□ -1.99
SMARCA2-248ENST00000636221 Q8IZM0 81 aa2.62□□□□□ -1.99
SMARCA2-248ENST00000636221 LINC01561Q8N1V8 128 aa2.62□□□□□ -1.99
SMARCA2-248ENST00000636221 C9orf163Q8N9P6 203 aa2.62□□□□□ -1.99
SMARCA2-248ENST00000636221 COX7B2Q8TF08 81 aa2.62□□□□□ -1.99
SMARCA2-248ENST00000636221 C2orf48Q96LS8 159 aa2.62□□□□□ -1.99
SMARCA2-248ENST00000636221 LOC107984640A0A0U1RRK4 108 aa2.61□□□□□ -1.99
SMARCA2-248ENST00000636221 TMEM223A0PJW6 202 aa2.61□□□□□ -1.99
SMARCA2-248ENST00000636221 SYS1-DBNDD2H3BUS1 97 aa2.61□□□□□ -1.99
SMARCA2-248ENST00000636221 DPM2O94777 84 aa2.61□□□□□ -1.99
SMARCA2-248ENST00000636221 IGKCP01834 107 aa2.61□□□□□ -1.99
SMARCA2-248ENST00000636221 C3orf79P0CE67 100 aa2.61□□□□□ -1.99
SMARCA2-248ENST00000636221 CHTF8P0CG12 524 aa2.61□□□□□ -1.99
SMARCA2-248ENST00000636221 PLNP26678 52 aa2.61□□□□□ -1.99
SMARCA2-248ENST00000636221 SNRPEP62304 92 aaKnown RBP2.61□□□□□ -1.99
SMARCA2-248ENST00000636221 RPL18AQ02543 176 aaKnown RBP2.61□□□□□ -1.99
SMARCA2-248ENST00000636221 GAGE2BQ13066 116 aa2.61□□□□□ -1.99
SMARCA2-248ENST00000636221 KIAA0087Q14695 138 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms