RNA–Protein interactions for RNA: ENST00000635886.1

C11orf53-202, Transcript of chromosome 11 open reading frame 53, humanhuman

TSL 5

Gene C11orf53, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf53-202ENST00000635886 DPH3Q96FX2 82 aa8.55□□□□□ -1.04
C11orf53-202ENST00000635886 CARD19Q96LW7 228 aa8.55□□□□□ -1.04
C11orf53-202ENST00000635886 FLG2Q5D862 2391 aaPredicted RBP8.55□□□□□ -1.04
C11orf53-202ENST00000635886 IGLV4-69A0A075B6H9 119 aa8.54□□□□□ -1.04
C11orf53-202ENST00000635886 A0A087WYN8 130 aa8.54□□□□□ -1.04
C11orf53-202ENST00000635886 IGHV3OR16-9A0A0B4J2B5 98 aa8.54□□□□□ -1.04
C11orf53-202ENST00000635886 IGKV2-24A0A0C4DH68 120 aa8.54□□□□□ -1.04
C11orf53-202ENST00000635886 APOC3P02656 99 aa8.54□□□□□ -1.04
C11orf53-202ENST00000635886 TMEM141Q96I45 108 aa8.54□□□□□ -1.04
C11orf53-202ENST00000635886 APOMO95445 188 aa8.53□□□□□ -1.04
C11orf53-202ENST00000635886 COX19Q49B96 90 aa8.53□□□□□ -1.04
C11orf53-202ENST00000635886 ZC2HC1BQ5TFG8 222 aa8.53□□□□□ -1.04
C11orf53-202ENST00000635886 ALKBH7Q9BT30 221 aaPredicted RBP8.53□□□□□ -1.04
C11orf53-202ENST00000635886 A0A096LNI7 61 aa8.52□□□□□ -1.05
C11orf53-202ENST00000635886 IGIPA6NJ69 53 aa8.52□□□□□ -1.05
C11orf53-202ENST00000635886 SPAG11BQ08648 103 aa8.52□□□□□ -1.05
C11orf53-202ENST00000635886 MAJINQ3KP22 176 aa8.52□□□□□ -1.05
C11orf53-202ENST00000635886 LINC00242Q5T6M2 205 aa8.52□□□□□ -1.05
C11orf53-202ENST00000635886 TEX43Q6ZNM6 134 aa8.52□□□□□ -1.05
C11orf53-202ENST00000635886 Q6ZRU5 148 aa8.52□□□□□ -1.05
C11orf53-202ENST00000635886 MRPL18Q9H0U6 180 aaKnown RBP8.52□□□□□ -1.05
C11orf53-202ENST00000635886 TGIF2-C20orf24A0A0A6YYL0 155 aa8.51□□□□□ -1.05
C11orf53-202ENST00000635886 MT-ND6P03923 174 aa8.51□□□□□ -1.05
C11orf53-202ENST00000635886 RPL37AP61513 92 aaKnown RBP8.51□□□□□ -1.05
C11orf53-202ENST00000635886 FABP9Q0Z7S8 132 aa8.51□□□□□ -1.05
C11orf53-202ENST00000635886 NDUFA5Q16718 116 aa8.51□□□□□ -1.05
C11orf53-202ENST00000635886 Q6ZN92 141 aa8.51□□□□□ -1.05
C11orf53-202ENST00000635886 LINC00173Q6ZV60 143 aa8.51□□□□□ -1.05
C11orf53-202ENST00000635886 ORAOV1Q8WV07 137 aa8.51□□□□□ -1.05
C11orf53-202ENST00000635886 C2orf48Q96LS8 159 aa8.51□□□□□ -1.05
C11orf53-202ENST00000635886 CAMK2N2Q96S95 79 aa8.51□□□□□ -1.05
C11orf53-202ENST00000635886 PLAC8Q9NZF1 115 aa8.51□□□□□ -1.05
C11orf53-202ENST00000635886 SNAPINO95295 136 aa8.5□□□□□ -1.05
C11orf53-202ENST00000635886 UBE2D1P51668 147 aa8.5□□□□□ -1.05
C11orf53-202ENST00000635886 SVBPQ8N300 66 aa8.5□□□□□ -1.05
C11orf53-202ENST00000635886 OR10D4PQ8NGN7 298 aa8.5□□□□□ -1.05
C11orf53-202ENST00000635886 AMELXQ99217 191 aa8.5□□□□□ -1.05
C11orf53-202ENST00000635886 C2orf88Q9BSF0 95 aa8.5□□□□□ -1.05
C11orf53-202ENST00000635886 VCX2Q9H322 139 aa8.5□□□□□ -1.05
C11orf53-202ENST00000635886 PKIGQ9Y2B9 76 aa8.5□□□□□ -1.05
C11orf53-202ENST00000635886 A0A087WZ39 114 aa8.49□□□□□ -1.05
C11orf53-202ENST00000635886 NPSP0C0P6 89 aa8.49□□□□□ -1.05
C11orf53-202ENST00000635886 G0S2P27469 103 aa8.49□□□□□ -1.05
C11orf53-202ENST00000635886 STPG4Q8N801 248 aa8.49□□□□□ -1.05
C11orf53-202ENST00000635886 TOMM6Q96B49 74 aa8.49□□□□□ -1.05
C11orf53-202ENST00000635886 MYCBP2O75592 4640 aa8.49□□□□□ -1.05
C11orf53-202ENST00000635886 LINC01546A6NGU7 62 aa8.48□□□□□ -1.05
C11orf53-202ENST00000635886 TIMM17AQ99595 171 aa8.48□□□□□ -1.05
C11orf53-202ENST00000635886 LOC107984640A0A0U1RRK4 108 aa8.47□□□□□ -1.05
C11orf53-202ENST00000635886 PAPPA-AS1Q5QFB9 102 aa8.47□□□□□ -1.05
C11orf53-202ENST00000635886 LINC00474Q9P2X8 69 aa8.47□□□□□ -1.05
C11orf53-202ENST00000635886 TRAPPC1Q9Y5R8 145 aa8.47□□□□□ -1.05
C11orf53-202ENST00000635886 A0A0J9YXV3 536 aa8.46□□□□□ -1.06
C11orf53-202ENST00000635886 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.46□□□□□ -1.06
C11orf53-202ENST00000635886 PTTG1IPP53801 180 aa8.46□□□□□ -1.06
C11orf53-202ENST00000635886 GAGE2BQ13066 116 aa8.46□□□□□ -1.06
C11orf53-202ENST00000635886 FA2HQ7L5A8 372 aa8.46□□□□□ -1.06
C11orf53-202ENST00000635886 ERASQ7Z444 233 aa8.46□□□□□ -1.06
C11orf53-202ENST00000635886 SCGB3A1Q96QR1 104 aa8.46□□□□□ -1.06
C11orf53-202ENST00000635886 F8WDY8 70 aa8.45□□□□□ -1.06
C11orf53-202ENST00000635886 NDUFA1O15239 70 aa8.45□□□□□ -1.06
C11orf53-202ENST00000635886 HNRNPA3P51991 378 aaKnown RBP8.45□□□□□ -1.06
C11orf53-202ENST00000635886 KIAA0087Q14695 138 aa8.45□□□□□ -1.06
C11orf53-202ENST00000635886 RNF151Q2KHN1 245 aa8.45□□□□□ -1.06
C11orf53-202ENST00000635886 C10orf25Q5T742 122 aa8.45□□□□□ -1.06
C11orf53-202ENST00000635886 FAM19A3Q7Z5A8 133 aa8.45□□□□□ -1.06
C11orf53-202ENST00000635886 SMCO4Q9NRQ5 59 aa8.45□□□□□ -1.06
C11orf53-202ENST00000635886 MRPL35Q9NZE8 188 aaKnown RBP8.45□□□□□ -1.06
C11orf53-202ENST00000635886 DMBT1Q9UGM3 2413 aaPredicted RBP8.45□□□□□ -1.06
C11orf53-202ENST00000635886 UNQ6190/PRO20217Q6UXQ8 127 aa8.44□□□□□ -1.06
C11orf53-202ENST00000635886 LINC01561Q8N1V8 128 aa8.44□□□□□ -1.06
C11orf53-202ENST00000635886 C7orf33Q8WU49 177 aa8.44□□□□□ -1.06
C11orf53-202ENST00000635886 RPL18AQ02543 176 aaKnown RBP8.43□□□□□ -1.06
C11orf53-202ENST00000635886 C18orf32Q8TCD1 76 aa8.43□□□□□ -1.06
C11orf53-202ENST00000635886 YPEL4Q96NS1 127 aa8.43□□□□□ -1.06
C11orf53-202ENST00000635886 C6orf48Q9UBA6 75 aa8.43□□□□□ -1.06
C11orf53-202ENST00000635886 LINC01549A6NIU2 74 aa8.42□□□□□ -1.06
C11orf53-202ENST00000635886 HERVK_113P63121 156 aa8.42□□□□□ -1.06
C11orf53-202ENST00000635886 SEC11AP67812 179 aa8.42□□□□□ -1.06
C11orf53-202ENST00000635886 URB1-AS1Q96HZ7 61 aa8.42□□□□□ -1.06
C11orf53-202ENST00000635886 GEMIN7Q9H840 131 aaKnown RBP8.42□□□□□ -1.06
C11orf53-202ENST00000635886 CDKN2A-AS1Q9UH64 79 aa8.42□□□□□ -1.06
C11orf53-202ENST00000635886 A0A1W2PNN7 141 aa8.41□□□□□ -1.06
C11orf53-202ENST00000635886 KRTAP29-1A8MX34 341 aaPredicted RBP8.41□□□□□ -1.06
C11orf53-202ENST00000635886 J3QL48 77 aa8.41□□□□□ -1.06
C11orf53-202ENST00000635886 C2orf82Q6UX34 121 aa8.41□□□□□ -1.06
C11orf53-202ENST00000635886 PKHD1L1Q86WI1 4243 aa8.4□□□□□ -1.06
C11orf53-202ENST00000635886 A0A096LNJ9 63 aa8.4□□□□□ -1.06
C11orf53-202ENST00000635886 SLC7A5P1Q8MH63 180 aa8.4□□□□□ -1.06
C11orf53-202ENST00000635886 CST9LQ9H4G1 147 aa8.4□□□□□ -1.06
C11orf53-202ENST00000635886 TOMM7Q9P0U1 55 aa8.4□□□□□ -1.06
C11orf53-202ENST00000635886 LINC00614P0C842 121 aa8.39□□□□□ -1.07
C11orf53-202ENST00000635886 TLX1NBP0CAT3 122 aa8.39□□□□□ -1.07
C11orf53-202ENST00000635886 C9orf116Q5BN46 136 aaPredicted RBP8.39□□□□□ -1.07
C11orf53-202ENST00000635886 Q6ZRP5 223 aa8.39□□□□□ -1.07
C11orf53-202ENST00000635886 CBLN2Q8IUK8 224 aa8.39□□□□□ -1.07
C11orf53-202ENST00000635886 PACRGQ96M98 296 aaPredicted RBP8.39□□□□□ -1.07
C11orf53-202ENST00000635886 LRP1Q07954 4544 aaKnown RBP8.39□□□□□ -1.07
C11orf53-202ENST00000635886 TRBV30A0A0K0K1B3 111 aa8.38□□□□□ -1.07
C11orf53-202ENST00000635886 TINCRA0A1B0GVN0 87 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms