RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 Q8NA96 180 aa4.1□□□□□ -1.75
SCN1A-209ENST00000635750 ADAMTS20P59510 1910 aa4.1□□□□□ -1.75
SCN1A-209ENST00000635750 M0QY20 66 aa4.1□□□□□ -1.75
SCN1A-209ENST00000635750 PTH2Q96A98 100 aa4.1□□□□□ -1.75
SCN1A-209ENST00000635750 C2orf48Q96LS8 159 aa4.1□□□□□ -1.75
SCN1A-209ENST00000635750 Q6Q795 121 aa4.1□□□□□ -1.75
SCN1A-209ENST00000635750 LINC01006Q8NI28 216 aa4.1□□□□□ -1.75
SCN1A-209ENST00000635750 C20orf173Q96LM9 149 aa4.1□□□□□ -1.75
SCN1A-209ENST00000635750 IMUPQ9GZP8 106 aa4.1□□□□□ -1.75
SCN1A-209ENST00000635750 C19orf84I3L1E1 186 aa4.1□□□□□ -1.75
SCN1A-209ENST00000635750 C22orf34Q6ZV56 151 aa4.1□□□□□ -1.75
SCN1A-209ENST00000635750 LINC00526Q96FQ7 95 aa4.1□□□□□ -1.75
SCN1A-209ENST00000635750 TTTY13Q9BZ97 58 aa4.1□□□□□ -1.75
SCN1A-209ENST00000635750 PYGO1Q9Y3Y4 419 aa4.1□□□□□ -1.75
SCN1A-209ENST00000635750 DOPEY1Q5JWR5 2465 aa4.1□□□□□ -1.75
SCN1A-209ENST00000635750 F8WDY8 70 aa4.1□□□□□ -1.75
SCN1A-209ENST00000635750 FAM229AH3BQW9 127 aa4.1□□□□□ -1.75
SCN1A-209ENST00000635750 TRIAP1O43715 76 aa4.1□□□□□ -1.75
SCN1A-209ENST00000635750 Q8IZM0 81 aa4.1□□□□□ -1.75
SCN1A-209ENST00000635750 FSTL3O95633 263 aa4.09□□□□□ -1.75
SCN1A-209ENST00000635750 MRPS36P82909 103 aaKnown RBP4.09□□□□□ -1.75
SCN1A-209ENST00000635750 SMIM11BQ8TCY0 68 aa4.09□□□□□ -1.75
SCN1A-209ENST00000635750 COL4A4P53420 1690 aaPredicted RBP4.09□□□□□ -1.75
SCN1A-209ENST00000635750 ZNF22P17026 224 aaPredicted RBP4.09□□□□□ -1.75
SCN1A-209ENST00000635750 NAV3Q8IVL0 2385 aa4.09□□□□□ -1.75
SCN1A-209ENST00000635750 LINC00208Q96KT6 92 aa4.09□□□□□ -1.76
SCN1A-209ENST00000635750 ZNF702PQ9H963 129 aa4.09□□□□□ -1.76
SCN1A-209ENST00000635750 IGLV2-14P01704 120 aa4.08□□□□□ -1.76
SCN1A-209ENST00000635750 PMAIP1Q13794 54 aa4.08□□□□□ -1.76
SCN1A-209ENST00000635750 C7orf65Q6ZTY9 151 aa4.08□□□□□ -1.76
SCN1A-209ENST00000635750 Q9BRP9 147 aa4.08□□□□□ -1.76
SCN1A-209ENST00000635750 NDUFA7O95182 113 aa4.08□□□□□ -1.76
SCN1A-209ENST00000635750 EBI3Q14213 229 aa4.08□□□□□ -1.76
SCN1A-209ENST00000635750 GDF5OSQ5U4N7 250 aa4.08□□□□□ -1.76
SCN1A-209ENST00000635750 CHCHD7Q9BUK0 85 aa4.08□□□□□ -1.76
SCN1A-209ENST00000635750 ZNF80P51504 273 aaPredicted RBP4.08□□□□□ -1.76
SCN1A-209ENST00000635750 C6orf223Q8N319 242 aa4.08□□□□□ -1.76
SCN1A-209ENST00000635750 ZNF524Q96C55 264 aa4.08□□□□□ -1.76
SCN1A-209ENST00000635750 hDV103S1A0JD37 113 aa4.08□□□□□ -1.76
SCN1A-209ENST00000635750 CYSRT1A8MQ03 144 aa4.08□□□□□ -1.76
SCN1A-209ENST00000635750 LINC01547P58512 204 aaPredicted RBP4.08□□□□□ -1.76
SCN1A-209ENST00000635750 EGFEM1PQ0D2K5 195 aa4.08□□□□□ -1.76
SCN1A-209ENST00000635750 C1orf195Q5TG92 126 aa4.08□□□□□ -1.76
SCN1A-209ENST00000635750 PROK1P58294 105 aa4.07□□□□□ -1.76
SCN1A-209ENST00000635750 MBD6Q96DN6 1003 aa4.07□□□□□ -1.76
SCN1A-209ENST00000635750 LTBP2Q14767 1821 aa4.07□□□□□ -1.76
SCN1A-209ENST00000635750 HIVEP3Q5T1R4 2406 aa4.07□□□□□ -1.76
SCN1A-209ENST00000635750 CELA1Q9UNI1 258 aa4.07□□□□□ -1.76
SCN1A-209ENST00000635750 H0Y9P7 68 aa4.06□□□□□ -1.76
SCN1A-209ENST00000635750 PLA2G2EQ9NZK7 142 aa4.06□□□□□ -1.76
SCN1A-209ENST00000635750 PRLHP81277 87 aa4.06□□□□□ -1.76
SCN1A-209ENST00000635750 SBSPONQ8IVN8 264 aa4.06□□□□□ -1.76
SCN1A-209ENST00000635750 FRMD6-AS1P0C7T7 363 aa4.06□□□□□ -1.76
SCN1A-209ENST00000635750 EDN2P20800 178 aa4.06□□□□□ -1.76
SCN1A-209ENST00000635750 NRACQ8N912 160 aa4.06□□□□□ -1.76
SCN1A-209ENST00000635750 TRAV7A0A075B6U4 112 aa4.06□□□□□ -1.76
SCN1A-209ENST00000635750 NUPR1O60356 82 aa4.06□□□□□ -1.76
SCN1A-209ENST00000635750 GPR179Q6PRD1 2367 aa4.06□□□□□ -1.76
SCN1A-209ENST00000635750 MT-ATP8P03928 68 aa4.05□□□□□ -1.76
SCN1A-209ENST00000635750 LINC00574Q9H8X3 128 aa4.05□□□□□ -1.76
SCN1A-209ENST00000635750 LRRK2Q5S007 2527 aa4.05□□□□□ -1.76
SCN1A-209ENST00000635750 ZFHX2Q9C0A1 2572 aaPredicted RBP4.05□□□□□ -1.76
SCN1A-209ENST00000635750 IGKV2D-30A0A075B6S6 120 aa4.05□□□□□ -1.76
SCN1A-209ENST00000635750 TSHBP01222 138 aa4.05□□□□□ -1.76
SCN1A-209ENST00000635750 IGKV2-30P06310 120 aa4.05□□□□□ -1.76
SCN1A-209ENST00000635750 SMIM26A0A096LP01 95 aa4.05□□□□□ -1.76
SCN1A-209ENST00000635750 MSMPQ1L6U9 139 aa4.05□□□□□ -1.76
SCN1A-209ENST00000635750 POM121L12Q8N7R1 296 aa4.05□□□□□ -1.76
SCN1A-209ENST00000635750 PCOTHQ58A44 107 aa4.05□□□□□ -1.76
SCN1A-209ENST00000635750 ACACBO00763 2458 aa4.05□□□□□ -1.76
SCN1A-209ENST00000635750 J3QL48 77 aa4.04□□□□□ -1.76
SCN1A-209ENST00000635750 NTM-AS1Q6ZSK4 140 aa4.04□□□□□ -1.76
SCN1A-209ENST00000635750 COX7CP15954 63 aa4.04□□□□□ -1.76
SCN1A-209ENST00000635750 C11orf71Q6IPW1 123 aa4.04□□□□□ -1.76
SCN1A-209ENST00000635750 ANKHD1Q8IWZ3 2542 aaKnown RBP4.04□□□□□ -1.76
SCN1A-209ENST00000635750 CDC42SE2Q9NRR3 84 aa4.04□□□□□ -1.76
SCN1A-209ENST00000635750 C18orf65Q6ZTR6 163 aa4.04□□□□□ -1.76
SCN1A-209ENST00000635750 Q8N814 137 aa4.04□□□□□ -1.76
SCN1A-209ENST00000635750 C10orf99Q6UWK7 81 aa4.03□□□□□ -1.76
SCN1A-209ENST00000635750 HCG22E2RYF7 251 aa4.03□□□□□ -1.76
SCN1A-209ENST00000635750 MRPS12O15235 138 aaKnown RBP4.03□□□□□ -1.76
SCN1A-209ENST00000635750 RNASE3P12724 160 aaKnown RBP4.03□□□□□ -1.76
SCN1A-209ENST00000635750 ACYP2P14621 99 aa4.03□□□□□ -1.76
SCN1A-209ENST00000635750 XGP55808 180 aa4.03□□□□□ -1.76
SCN1A-209ENST00000635750 LINC00575Q6W349 94 aa4.03□□□□□ -1.76
SCN1A-209ENST00000635750 RNASE8Q8TDE3 154 aaKnown RBP4.03□□□□□ -1.76
SCN1A-209ENST00000635750 BRI3O95415 125 aa4.03□□□□□ -1.76
SCN1A-209ENST00000635750 TRBV7-7A0A0K0K1E9 115 aa4.03□□□□□ -1.76
SCN1A-209ENST00000635750 COX6A2Q02221 97 aa4.03□□□□□ -1.76
SCN1A-209ENST00000635750 TRBV10-3A0A0K0K1G6 114 aa4.03□□□□□ -1.76
SCN1A-209ENST00000635750 UNQ6190/PRO20217Q6UXQ8 127 aa4.03□□□□□ -1.76
SCN1A-209ENST00000635750 CRYGAP11844 174 aa4.02□□□□□ -1.77
SCN1A-209ENST00000635750 Q6ZTC4 211 aa4.02□□□□□ -1.77
SCN1A-209ENST00000635750 Q8N2B8 174 aa4.02□□□□□ -1.77
SCN1A-209ENST00000635750 MYO18BQ8IUG5 2567 aa4.02□□□□□ -1.77
SCN1A-209ENST00000635750 SPACA4Q8TDM5 124 aa4.02□□□□□ -1.77
SCN1A-209ENST00000635750 A0A1B0GU69 56 aa4.02□□□□□ -1.77
SCN1A-209ENST00000635750 TP73-AS1Q9UF72 201 aa4.02□□□□□ -1.77
SCN1A-209ENST00000635750 BEAN1Q3B7T3 259 aa4.02□□□□□ -1.77
SCN1A-209ENST00000635750 SPAG11AQ6PDA7 123 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms