RNA–Protein interactions for RNA: ENST00000635388.1

SMARCA2-239, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-239ENST00000635388 BAALCQ8WXS3 180 aa4.39□□□□□ -1.71
SMARCA2-239ENST00000635388 TMEM101Q96IK0 257 aa4.39□□□□□ -1.71
SMARCA2-239ENST00000635388 TMEM70Q9BUB7 260 aa4.39□□□□□ -1.71
SMARCA2-239ENST00000635388 TRAV26-2A0A0B4J265 109 aa4.38□□□□□ -1.71
SMARCA2-239ENST00000635388 ZNF727A8MUV8 499 aa4.38□□□□□ -1.71
SMARCA2-239ENST00000635388 KRTAP4-16G5E9R7 235 aaPredicted RBP4.38□□□□□ -1.71
SMARCA2-239ENST00000635388 NDUFS6O75380 124 aaKnown RBP4.38□□□□□ -1.71
SMARCA2-239ENST00000635388 HLA-DQA1P01909 254 aa4.38□□□□□ -1.71
SMARCA2-239ENST00000635388 RBX1P62877 108 aa4.38□□□□□ -1.71
SMARCA2-239ENST00000635388 COTL1Q14019 142 aa4.38□□□□□ -1.71
SMARCA2-239ENST00000635388 IQCJQ1A5X6 159 aa4.38□□□□□ -1.71
SMARCA2-239ENST00000635388 FAM231DQ6ZW35 169 aa4.38□□□□□ -1.71
SMARCA2-239ENST00000635388 LINC01551Q86U37 167 aa4.38□□□□□ -1.71
SMARCA2-239ENST00000635388 TMEM243Q9BU79 118 aa4.38□□□□□ -1.71
SMARCA2-239ENST00000635388 NIT2Q9NQR4 276 aa4.38□□□□□ -1.71
SMARCA2-239ENST00000635388 HIGD1CA8MV81 97 aa4.37□□□□□ -1.71
SMARCA2-239ENST00000635388 UBE2L6O14933 153 aa4.37□□□□□ -1.71
SMARCA2-239ENST00000635388 SRP19P09132 144 aaKnown RBP4.37□□□□□ -1.71
SMARCA2-239ENST00000635388 MIAQ16674 131 aa4.37□□□□□ -1.71
SMARCA2-239ENST00000635388 Q5VSD8 79 aa4.37□□□□□ -1.71
SMARCA2-239ENST00000635388 ENHOQ6UWT2 76 aa4.37□□□□□ -1.71
SMARCA2-239ENST00000635388 GATD1Q8NB37 220 aa4.37□□□□□ -1.71
SMARCA2-239ENST00000635388 C20orf203Q8NBC4 194 aa4.37□□□□□ -1.71
SMARCA2-239ENST00000635388 DEFB104AQ8WTQ1 72 aa4.37□□□□□ -1.71
SMARCA2-239ENST00000635388 FRZBQ92765 325 aa4.37□□□□□ -1.71
SMARCA2-239ENST00000635388 BORCS7Q96B45 105 aa4.37□□□□□ -1.71
SMARCA2-239ENST00000635388 HIST1H4GQ99525 98 aa4.37□□□□□ -1.71
SMARCA2-239ENST00000635388 FAT1Q14517 4588 aa4.36□□□□□ -1.71
SMARCA2-239ENST00000635388 SRRM2Q9UQ35 2752 aaKnown RBP4.36□□□□□ -1.71
SMARCA2-239ENST00000635388 A0A1B0GUT8 65 aa4.36□□□□□ -1.71
SMARCA2-239ENST00000635388 FOXA3P55318 350 aaPredicted RBP4.36□□□□□ -1.71
SMARCA2-239ENST00000635388 MAJINQ3KP22 176 aa4.36□□□□□ -1.71
SMARCA2-239ENST00000635388 KRTAP11-1Q8IUC1 163 aa4.36□□□□□ -1.71
SMARCA2-239ENST00000635388 LINC00269Q8N2A0 174 aa4.36□□□□□ -1.71
SMARCA2-239ENST00000635388 TSKUQ8WUA8 353 aa4.36□□□□□ -1.71
SMARCA2-239ENST00000635388 RPL39LQ96EH5 51 aaKnown RBP4.36□□□□□ -1.71
SMARCA2-239ENST00000635388 OSTCQ9NRP0 149 aa4.36□□□□□ -1.71
SMARCA2-239ENST00000635388 IGLV4-60A0A075B6I1 120 aa4.35□□□□□ -1.71
SMARCA2-239ENST00000635388 IGLV10-54A0A075B6I4 117 aa4.35□□□□□ -1.71
SMARCA2-239ENST00000635388 SDHAF1A6NFY7 115 aa4.35□□□□□ -1.71
SMARCA2-239ENST00000635388 SMR3BP02814 79 aaPredicted RBP4.35□□□□□ -1.71
SMARCA2-239ENST00000635388 REG3AQ06141 175 aa4.35□□□□□ -1.71
SMARCA2-239ENST00000635388 ADIRFQ15847 76 aa4.35□□□□□ -1.71
SMARCA2-239ENST00000635388 TEX261Q6UWH6 196 aa4.35□□□□□ -1.71
SMARCA2-239ENST00000635388 Q6ZSA8 131 aa4.35□□□□□ -1.71
SMARCA2-239ENST00000635388 ISOC2Q96AB3 205 aa4.35□□□□□ -1.71
SMARCA2-239ENST00000635388 V9GYV3 84 aa4.35□□□□□ -1.71
SMARCA2-239ENST00000635388 ABCA13Q86UQ4 5058 aa4.35□□□□□ -1.71
SMARCA2-239ENST00000635388 VPS13BQ7Z7G8 4022 aa4.35□□□□□ -1.71
SMARCA2-239ENST00000635388 NCR2O95944 276 aa4.34□□□□□ -1.71
SMARCA2-239ENST00000635388 APCSP02743 223 aa4.34□□□□□ -1.71
SMARCA2-239ENST00000635388 SEC61GP60059 68 aa4.34□□□□□ -1.71
SMARCA2-239ENST00000635388 RPL23P62829 140 aaKnown RBP4.34□□□□□ -1.71
SMARCA2-239ENST00000635388 PEA15Q15121 130 aa4.34□□□□□ -1.71
SMARCA2-239ENST00000635388 TMEM241Q24JQ0 296 aa4.34□□□□□ -1.71
SMARCA2-239ENST00000635388 AMMECR1LQ6DCA0 310 aa4.34□□□□□ -1.71
SMARCA2-239ENST00000635388 UQCC3Q6UW78 93 aa4.34□□□□□ -1.71
SMARCA2-239ENST00000635388 TMEM191AQ9H0A3 160 aa4.34□□□□□ -1.71
SMARCA2-239ENST00000635388 NAT8Q9UHE5 227 aa4.34□□□□□ -1.71
SMARCA2-239ENST00000635388 DNAH8Q96JB1 4490 aa4.34□□□□□ -1.72
SMARCA2-239ENST00000635388 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.33□□□□□ -1.72
SMARCA2-239ENST00000635388 TRAV8-4A0A0B4J246 113 aa4.33□□□□□ -1.72
SMARCA2-239ENST00000635388 IGKV3OR2-268A0A0C4DH90 116 aa4.33□□□□□ -1.72
SMARCA2-239ENST00000635388 IGKV2-29A2NJV5 120 aaPredicted RBP4.33□□□□□ -1.72
SMARCA2-239ENST00000635388 C9JQL5 133 aa4.33□□□□□ -1.72
SMARCA2-239ENST00000635388 H0Y9J4 135 aa4.33□□□□□ -1.72
SMARCA2-239ENST00000635388 PMCHP20382 165 aa4.33□□□□□ -1.72
SMARCA2-239ENST00000635388 RNASEKQ6P5S7 137 aaKnown RBP4.33□□□□□ -1.72
SMARCA2-239ENST00000635388 KRTAP26-1Q6PEX3 210 aa4.33□□□□□ -1.72
SMARCA2-239ENST00000635388 AMN1Q8IY45 258 aa4.33□□□□□ -1.72
SMARCA2-239ENST00000635388 NUP35Q8NFH5 326 aa4.33□□□□□ -1.72
SMARCA2-239ENST00000635388 MRAP2Q96G30 205 aa4.33□□□□□ -1.72
SMARCA2-239ENST00000635388 TRBV6-5A0A0K0K1A5 114 aa4.32□□□□□ -1.72
SMARCA2-239ENST00000635388 I3L3M4 83 aa4.32□□□□□ -1.72
SMARCA2-239ENST00000635388 INAFM2P0DMQ5 153 aa4.32□□□□□ -1.72
SMARCA2-239ENST00000635388 FGF6P10767 208 aa4.32□□□□□ -1.72
SMARCA2-239ENST00000635388 RPS10P46783 165 aaKnown RBP4.32□□□□□ -1.72
SMARCA2-239ENST00000635388 SCXQ7RTU7 201 aa4.32□□□□□ -1.72
SMARCA2-239ENST00000635388 RNF185Q96GF1 192 aa4.32□□□□□ -1.72
SMARCA2-239ENST00000635388 SMDT1Q9H4I9 107 aa4.32□□□□□ -1.72
SMARCA2-239ENST00000635388 ST20Q9HBF5 79 aa4.32□□□□□ -1.72
SMARCA2-239ENST00000635388 TMEM242Q9NWH2 141 aa4.32□□□□□ -1.72
SMARCA2-239ENST00000635388 NAT8BQ9UHF3 227 aa4.32□□□□□ -1.72
SMARCA2-239ENST00000635388 C7orf77A4D0Y5 90 aa4.31□□□□□ -1.72
SMARCA2-239ENST00000635388 SMKR1H3BMG3 65 aa4.31□□□□□ -1.72
SMARCA2-239ENST00000635388 ZNF25P17030 456 aaPredicted RBP4.31□□□□□ -1.72
SMARCA2-239ENST00000635388 RAB4AP20338 218 aa4.31□□□□□ -1.72
SMARCA2-239ENST00000635388 CHAC1Q9BUX1 264 aa4.31□□□□□ -1.72
SMARCA2-239ENST00000635388 MYCBP2O75592 4640 aa4.31□□□□□ -1.72
SMARCA2-239ENST00000635388 TRBV27A0A0K0K1C4 114 aa4.3□□□□□ -1.72
SMARCA2-239ENST00000635388 A0A1B0GW15 77 aa4.3□□□□□ -1.72
SMARCA2-239ENST00000635388 SMIM27A0A1W2PRY6 76 aa4.3□□□□□ -1.72
SMARCA2-239ENST00000635388 PPP1R17O96001 155 aa4.3□□□□□ -1.72
SMARCA2-239ENST00000635388 CHTF8P0CG12 524 aa4.3□□□□□ -1.72
SMARCA2-239ENST00000635388 FCER1GP30273 86 aa4.3□□□□□ -1.72
SMARCA2-239ENST00000635388 POLR2KP53803 58 aaKnown RBP4.3□□□□□ -1.72
SMARCA2-239ENST00000635388 MRPL54Q6P161 138 aaKnown RBP4.3□□□□□ -1.72
SMARCA2-239ENST00000635388 OR5A1Q8NGJ0 315 aa4.3□□□□□ -1.72
SMARCA2-239ENST00000635388 BTF3L4Q96K17 158 aa4.3□□□□□ -1.72
SMARCA2-239ENST00000635388 PPP1R2P9O14990 202 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms