RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 ALKAL2Q6UX46 152 aa7.65□□□□□ -1.18
LINC00339-206ENST00000634451 SLC51BQ86UW2 128 aa7.65□□□□□ -1.18
LINC00339-206ENST00000634451 V9GYV3 84 aa7.65□□□□□ -1.18
LINC00339-206ENST00000634451 TAGLN2P37802 199 aaKnown RBP7.64□□□□□ -1.19
LINC00339-206ENST00000634451 UBE2D1P51668 147 aa7.64□□□□□ -1.19
LINC00339-206ENST00000634451 UBE2BP63146 152 aa7.64□□□□□ -1.19
LINC00339-206ENST00000634451 KIAA0087Q14695 138 aa7.64□□□□□ -1.19
LINC00339-206ENST00000634451 KIR2DL4Q99706 377 aa7.64□□□□□ -1.19
LINC00339-206ENST00000634451 SMIM7Q9BQ49 75 aa7.64□□□□□ -1.19
LINC00339-206ENST00000634451 TIMM21Q9BVV7 248 aa7.64□□□□□ -1.19
LINC00339-206ENST00000634451 TLX1NBP0CAT3 122 aa7.63□□□□□ -1.19
LINC00339-206ENST00000634451 IMMP2LQ96T52 175 aa7.63□□□□□ -1.19
LINC00339-206ENST00000634451 IFITM10A6NMD0 228 aa7.62□□□□□ -1.19
LINC00339-206ENST00000634451 TCAPO15273 167 aa7.62□□□□□ -1.19
LINC00339-206ENST00000634451 OSTCQ9NRP0 149 aa7.62□□□□□ -1.19
LINC00339-206ENST00000634451 A0A087X002 238 aa7.61□□□□□ -1.19
LINC00339-206ENST00000634451 RIGQ13278 110 aa7.61□□□□□ -1.19
LINC00339-206ENST00000634451 ZC2HC1BQ5TFG8 222 aa7.61□□□□□ -1.19
LINC00339-206ENST00000634451 FAM104BQ5XKR9 115 aa7.61□□□□□ -1.19
LINC00339-206ENST00000634451 TCTE3Q8IZS6 198 aa7.61□□□□□ -1.19
LINC00339-206ENST00000634451 FAM210AQ96ND0 272 aa7.61□□□□□ -1.19
LINC00339-206ENST00000634451 NPYP01303 97 aa7.6□□□□□ -1.19
LINC00339-206ENST00000634451 SRP19P09132 144 aaKnown RBP7.6□□□□□ -1.19
LINC00339-206ENST00000634451 SMIM2Q9BVW6 85 aa7.6□□□□□ -1.19
LINC00339-206ENST00000634451 KRTAP9-6A0A140TA67 174 aa7.59□□□□□ -1.19
LINC00339-206ENST00000634451 ZNF727A8MUV8 499 aa7.59□□□□□ -1.19
LINC00339-206ENST00000634451 TNFRSF6BO95407 300 aa7.59□□□□□ -1.19
LINC00339-206ENST00000634451 HBBP68871 147 aa7.59□□□□□ -1.19
LINC00339-206ENST00000634451 LINC00242Q5T6M2 205 aa7.59□□□□□ -1.19
LINC00339-206ENST00000634451 LINC00469Q8N7U9 141 aa7.59□□□□□ -1.19
LINC00339-206ENST00000634451 ANAPC11Q9NYG5 84 aa7.59□□□□□ -1.19
LINC00339-206ENST00000634451 D6R8Y8 96 aa7.58□□□□□ -1.2
LINC00339-206ENST00000634451 PPP1R2P9O14990 202 aa7.58□□□□□ -1.2
LINC00339-206ENST00000634451 MRPS36P82909 103 aaKnown RBP7.58□□□□□ -1.2
LINC00339-206ENST00000634451 TMEM241Q24JQ0 296 aa7.58□□□□□ -1.2
LINC00339-206ENST00000634451 RETNLBQ9BQ08 111 aa7.58□□□□□ -1.2
LINC00339-206ENST00000634451 EIF5A2Q9GZV4 153 aaKnown RBP7.58□□□□□ -1.2
LINC00339-206ENST00000634451 SPANXA1Q9NS26 97 aa7.58□□□□□ -1.2
LINC00339-206ENST00000634451 TRBV24-1A0A075B6N3 115 aa7.57□□□□□ -1.2
LINC00339-206ENST00000634451 C9JQL5 133 aa7.57□□□□□ -1.2
LINC00339-206ENST00000634451 ZNF861PO60384 105 aa7.57□□□□□ -1.2
LINC00339-206ENST00000634451 CKS2P33552 79 aa7.57□□□□□ -1.2
LINC00339-206ENST00000634451 RPL13AP40429 203 aaKnown RBP7.57□□□□□ -1.2
LINC00339-206ENST00000634451 SMAGPQ0VAQ4 97 aa7.57□□□□□ -1.2
LINC00339-206ENST00000634451 TMEM18Q96B42 140 aa7.57□□□□□ -1.2
LINC00339-206ENST00000634451 C20orf78Q9BR46 151 aa7.57□□□□□ -1.2
LINC00339-206ENST00000634451 XAGE1AQ9HD64 81 aa7.57□□□□□ -1.2
LINC00339-206ENST00000634451 MUC17Q685J3 4493 aa7.57□□□□□ -1.2
LINC00339-206ENST00000634451 IGLV4-3A0A075B6K6 122 aa7.56□□□□□ -1.2
LINC00339-206ENST00000634451 NDUFC2-KCTD14E9PQ53 114 aa7.56□□□□□ -1.2
LINC00339-206ENST00000634451 F8WDY8 70 aa7.56□□□□□ -1.2
LINC00339-206ENST00000634451 PPP1R17O96001 155 aa7.56□□□□□ -1.2
LINC00339-206ENST00000634451 RPL23P62829 140 aaKnown RBP7.56□□□□□ -1.2
LINC00339-206ENST00000634451 BLOC1S1P78537 153 aa7.56□□□□□ -1.2
LINC00339-206ENST00000634451 FAM74A3Q4VXF1 159 aa7.56□□□□□ -1.2
LINC00339-206ENST00000634451 MRPL54Q6P161 138 aaKnown RBP7.56□□□□□ -1.2
LINC00339-206ENST00000634451 CTDSP1Q9GZU7 261 aa7.56□□□□□ -1.2
LINC00339-206ENST00000634451 NAT8BQ9UHF3 227 aa7.56□□□□□ -1.2
LINC00339-206ENST00000634451 TGIF2-C20orf24A0A0A6YYL0 155 aa7.55□□□□□ -1.2
LINC00339-206ENST00000634451 RPL32P62910 135 aaKnown RBP7.55□□□□□ -1.2
LINC00339-206ENST00000634451 C22orf24Q9Y442 160 aa7.55□□□□□ -1.2
LINC00339-206ENST00000634451 TRBV30A0A0K0K1B3 111 aa7.54□□□□□ -1.2
LINC00339-206ENST00000634451 A0A0U1RQV1 116 aa7.54□□□□□ -1.2
LINC00339-206ENST00000634451 SMIM27A0A1W2PRY6 76 aa7.54□□□□□ -1.2
LINC00339-206ENST00000634451 ADIRFQ15847 76 aa7.54□□□□□ -1.2
LINC00339-206ENST00000634451 LINC00173Q6ZV60 143 aa7.54□□□□□ -1.2
LINC00339-206ENST00000634451 CARHSP1Q9Y2V2 147 aaKnown RBP7.54□□□□□ -1.2
LINC00339-206ENST00000634451 LINC00862A6NCI5 91 aa7.53□□□□□ -1.2
LINC00339-206ENST00000634451 A0A1B0GXF2 115 aa7.52□□□□□ -1.21
LINC00339-206ENST00000634451 SRSF3P84103 164 aaKnown RBP7.52□□□□□ -1.21
LINC00339-206ENST00000634451 KRTAP13-2Q52LG2 175 aa7.52□□□□□ -1.21
LINC00339-206ENST00000634451 PACRGQ96M98 296 aaPredicted RBP7.52□□□□□ -1.21
LINC00339-206ENST00000634451 TOMM7Q9P0U1 55 aa7.52□□□□□ -1.21
LINC00339-206ENST00000634451 IFI27P40305 119 aaPredicted RBP7.51□□□□□ -1.21
LINC00339-206ENST00000634451 RPL37AP8A6NKH3 93 aa7.5□□□□□ -1.21
LINC00339-206ENST00000634451 TYMSOSQ8TAI1 123 aa7.5□□□□□ -1.21
LINC00339-206ENST00000634451 TMEM141Q96I45 108 aa7.5□□□□□ -1.21
LINC00339-206ENST00000634451 hCG_2014768A0A024R1R8 64 aa7.49□□□□□ -1.21
LINC00339-206ENST00000634451 LOC389332A0A1B0GUA5 103 aa7.49□□□□□ -1.21
LINC00339-206ENST00000634451 PYGO1Q9Y3Y4 419 aa7.49□□□□□ -1.21
LINC00339-206ENST00000634451 GAGE10A6NGK3 116 aa7.48□□□□□ -1.21
LINC00339-206ENST00000634451 NUPR1O60356 82 aa7.48□□□□□ -1.21
LINC00339-206ENST00000634451 TEX43Q6ZNM6 134 aa7.48□□□□□ -1.21
LINC00339-206ENST00000634451 BCE1O60756 84 aa7.47□□□□□ -1.21
LINC00339-206ENST00000634451 SCO1O75880 301 aa7.47□□□□□ -1.21
LINC00339-206ENST00000634451 CRYGAP11844 174 aa7.47□□□□□ -1.21
LINC00339-206ENST00000634451 MRPL55Q7Z7F7 128 aaKnown RBP7.47□□□□□ -1.21
LINC00339-206ENST00000634451 PRELID3AQ96N28 172 aa7.47□□□□□ -1.21
LINC00339-206ENST00000634451 NAT8Q9UHE5 227 aa7.47□□□□□ -1.21
LINC00339-206ENST00000634451 A0A1B0GW15 77 aa7.46□□□□□ -1.22
LINC00339-206ENST00000634451 PRSS2P07478 247 aa7.46□□□□□ -1.22
LINC00339-206ENST00000634451 RAB5AP20339 215 aa7.46□□□□□ -1.22
LINC00339-206ENST00000634451 CKS1BP61024 79 aa7.46□□□□□ -1.22
LINC00339-206ENST00000634451 TMEM136Q6ZRR5 245 aa7.46□□□□□ -1.22
LINC00339-206ENST00000634451 ORMDL3Q8N138 153 aa7.46□□□□□ -1.22
LINC00339-206ENST00000634451 LINC00167Q96N53 147 aa7.46□□□□□ -1.22
LINC00339-206ENST00000634451 AMELXQ99217 191 aa7.46□□□□□ -1.22
LINC00339-206ENST00000634451 RPL28P46779 137 aaKnown RBP7.45□□□□□ -1.22
LINC00339-206ENST00000634451 C2orf66Q6UXQ4 117 aa7.45□□□□□ -1.22
LINC00339-206ENST00000634451 AKAP14Q86UN6 197 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms