RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 RAB5BP61020 215 aa6.27□□□□□ -1.41
LINC01560-202ENST00000624822 PRSS1P07477 247 aa6.26□□□□□ -1.41
LINC01560-202ENST00000624822 MRPS36P82909 103 aaKnown RBP6.26□□□□□ -1.41
LINC01560-202ENST00000624822 CFAP161Q6P656 301 aa6.26□□□□□ -1.41
LINC01560-202ENST00000624822 Q6ZN92 141 aa6.26□□□□□ -1.41
LINC01560-202ENST00000624822 TMEM141Q96I45 108 aa6.26□□□□□ -1.41
LINC01560-202ENST00000624822 AP5S1Q9NUS5 200 aa6.26□□□□□ -1.41
LINC01560-202ENST00000624822 PKHD1P08F94 4074 aa6.25□□□□□ -1.41
LINC01560-202ENST00000624822 IGLV4-3A0A075B6K6 122 aa6.25□□□□□ -1.41
LINC01560-202ENST00000624822 MALP21145 153 aa6.25□□□□□ -1.41
LINC01560-202ENST00000624822 FOXI1Q12951 378 aa6.25□□□□□ -1.41
LINC01560-202ENST00000624822 LINC01620Q4KN68 170 aa6.25□□□□□ -1.41
LINC01560-202ENST00000624822 HIGD2BQ4VC39 106 aa6.25□□□□□ -1.41
LINC01560-202ENST00000624822 CD164L2Q6UWJ8 174 aa6.25□□□□□ -1.41
LINC01560-202ENST00000624822 TEX43Q6ZNM6 134 aa6.25□□□□□ -1.41
LINC01560-202ENST00000624822 C18orf32Q8TCD1 76 aa6.25□□□□□ -1.41
LINC01560-202ENST00000624822 C2orf88Q9BSF0 95 aa6.25□□□□□ -1.41
LINC01560-202ENST00000624822 PYGO1Q9Y3Y4 419 aa6.25□□□□□ -1.41
LINC01560-202ENST00000624822 DNAH5Q8TE73 4624 aa6.24□□□□□ -1.41
LINC01560-202ENST00000624822 KRTAP10-1P60331 282 aa6.24□□□□□ -1.41
LINC01560-202ENST00000624822 C15orf56Q8N910 161 aa6.24□□□□□ -1.41
LINC01560-202ENST00000624822 TOMM6Q96B49 74 aa6.24□□□□□ -1.41
LINC01560-202ENST00000624822 KRTAP17-1Q9BYP8 105 aa6.24□□□□□ -1.41
LINC01560-202ENST00000624822 DYNC1H1Q14204 4646 aaKnown RBP6.24□□□□□ -1.41
LINC01560-202ENST00000624822 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.23□□□□□ -1.41
LINC01560-202ENST00000624822 COX7A2LO14548 114 aa6.23□□□□□ -1.41
LINC01560-202ENST00000624822 LINC00614P0C842 121 aa6.23□□□□□ -1.41
LINC01560-202ENST00000624822 PAPPA-AS1Q5QFB9 102 aa6.23□□□□□ -1.41
LINC01560-202ENST00000624822 C5orf38Q86SI9 138 aa6.23□□□□□ -1.41
LINC01560-202ENST00000624822 FAM104AQ969W3 186 aa6.23□□□□□ -1.41
LINC01560-202ENST00000624822 SCGB3A1Q96QR1 104 aa6.23□□□□□ -1.41
LINC01560-202ENST00000624822 VCX2Q9H322 139 aa6.23□□□□□ -1.41
LINC01560-202ENST00000624822 IGHV1-58A0A0C4DH39 117 aa6.22□□□□□ -1.41
LINC01560-202ENST00000624822 LINC01546A6NGU7 62 aa6.22□□□□□ -1.41
LINC01560-202ENST00000624822 LINC01549A6NIU2 74 aa6.22□□□□□ -1.41
LINC01560-202ENST00000624822 ZNF561-AS1K7EIQ3 104 aa6.22□□□□□ -1.41
LINC01560-202ENST00000624822 CDK2AP2O75956 126 aa6.22□□□□□ -1.41
LINC01560-202ENST00000624822 TRGC2P03986 189 aa6.22□□□□□ -1.41
LINC01560-202ENST00000624822 S100A6P06703 90 aa6.22□□□□□ -1.41
LINC01560-202ENST00000624822 ZC2HC1BQ5TFG8 222 aa6.22□□□□□ -1.41
LINC01560-202ENST00000624822 TIMM17AQ99595 171 aa6.22□□□□□ -1.41
LINC01560-202ENST00000624822 IGIPA6NJ69 53 aa6.21□□□□□ -1.42
LINC01560-202ENST00000624822 APOMO95445 188 aa6.21□□□□□ -1.42
LINC01560-202ENST00000624822 NPSP0C0P6 89 aa6.21□□□□□ -1.42
LINC01560-202ENST00000624822 PMCHL1Q16048 86 aa6.21□□□□□ -1.42
LINC01560-202ENST00000624822 ERASQ7Z444 233 aa6.21□□□□□ -1.42
LINC01560-202ENST00000624822 GVQW2A0A096LPI5 108 aaPredicted RBP6.2□□□□□ -1.42
LINC01560-202ENST00000624822 HBDP02042 147 aa6.2□□□□□ -1.42
LINC01560-202ENST00000624822 UBE2D1P51668 147 aa6.2□□□□□ -1.42
LINC01560-202ENST00000624822 HAMPP81172 84 aa6.2□□□□□ -1.42
LINC01560-202ENST00000624822 LINC00173Q6ZV60 143 aa6.2□□□□□ -1.42
LINC01560-202ENST00000624822 BAGE3Q86Y29 109 aa6.2□□□□□ -1.42
LINC01560-202ENST00000624822 C9orf163Q8N9P6 203 aa6.2□□□□□ -1.42
LINC01560-202ENST00000624822 LINC00526Q96FQ7 95 aa6.2□□□□□ -1.42
LINC01560-202ENST00000624822 URB1-AS1Q96HZ7 61 aa6.2□□□□□ -1.42
LINC01560-202ENST00000624822 AMELXQ99217 191 aa6.2□□□□□ -1.42
LINC01560-202ENST00000624822 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.19□□□□□ -1.42
LINC01560-202ENST00000624822 NDUFA6P56556 154 aa6.19□□□□□ -1.42
LINC01560-202ENST00000624822 SNRPEP62304 92 aaKnown RBP6.19□□□□□ -1.42
LINC01560-202ENST00000624822 CNBPP62633 177 aaKnown RBP6.19□□□□□ -1.42
LINC01560-202ENST00000624822 LINC00242Q5T6M2 205 aa6.19□□□□□ -1.42
LINC01560-202ENST00000624822 ORAOV1Q8WV07 137 aa6.19□□□□□ -1.42
LINC01560-202ENST00000624822 LRP1BQ9NZR2 4599 aa6.19□□□□□ -1.42
LINC01560-202ENST00000624822 IGLV4-69A0A075B6H9 119 aa6.18□□□□□ -1.42
LINC01560-202ENST00000624822 IGHV3-64A0A075B6Q5 118 aa6.18□□□□□ -1.42
LINC01560-202ENST00000624822 IGHV3OR16-9A0A0B4J2B5 98 aa6.18□□□□□ -1.42
LINC01560-202ENST00000624822 HIST1H2BKO60814 126 aa6.18□□□□□ -1.42
LINC01560-202ENST00000624822 SLPIP03973 132 aa6.18□□□□□ -1.42
LINC01560-202ENST00000624822 HIST1H2BJP06899 126 aa6.18□□□□□ -1.42
LINC01560-202ENST00000624822 HIST1H2BOP23527 126 aa6.18□□□□□ -1.42
LINC01560-202ENST00000624822 HIST1H2BBP33778 126 aa6.18□□□□□ -1.42
LINC01560-202ENST00000624822 HIST1H2BDP58876 126 aa6.18□□□□□ -1.42
LINC01560-202ENST00000624822 HIST1H2BCP62807 126 aa6.18□□□□□ -1.42
LINC01560-202ENST00000624822 SEC11AP67812 179 aa6.18□□□□□ -1.42
LINC01560-202ENST00000624822 COX6A2Q02221 97 aa6.18□□□□□ -1.42
LINC01560-202ENST00000624822 SPAG11BQ08648 103 aa6.18□□□□□ -1.42
LINC01560-202ENST00000624822 HIST2H2BEQ16778 126 aa6.18□□□□□ -1.42
LINC01560-202ENST00000624822 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.18□□□□□ -1.42
LINC01560-202ENST00000624822 HIST1H2BHQ93079 126 aa6.18□□□□□ -1.42
LINC01560-202ENST00000624822 CHCHD1Q96BP2 118 aaKnown RBP6.18□□□□□ -1.42
LINC01560-202ENST00000624822 CARD19Q96LW7 228 aa6.18□□□□□ -1.42
LINC01560-202ENST00000624822 CAMK2N2Q96S95 79 aa6.18□□□□□ -1.42
LINC01560-202ENST00000624822 HIST1H2BNQ99877 126 aa6.18□□□□□ -1.42
LINC01560-202ENST00000624822 HIST1H2BMQ99879 126 aa6.18□□□□□ -1.42
LINC01560-202ENST00000624822 GEMIN7Q9H840 131 aaKnown RBP6.18□□□□□ -1.42
LINC01560-202ENST00000624822 FAM30AQ9NZY2 134 aa6.18□□□□□ -1.42
LINC01560-202ENST00000624822 KIAA1109Q2LD37 5005 aa6.18□□□□□ -1.42
LINC01560-202ENST00000624822 A0A096LNJ9 63 aa6.17□□□□□ -1.42
LINC01560-202ENST00000624822 C5orf52A6NGY3 159 aa6.17□□□□□ -1.42
LINC01560-202ENST00000624822 HSBP1O75506 76 aa6.17□□□□□ -1.42
LINC01560-202ENST00000624822 AKR1D1P51857 326 aa6.17□□□□□ -1.42
LINC01560-202ENST00000624822 XGP55808 180 aa6.17□□□□□ -1.42
LINC01560-202ENST00000624822 HERVK_113P63121 156 aa6.17□□□□□ -1.42
LINC01560-202ENST00000624822 PMVKQ15126 192 aa6.17□□□□□ -1.42
LINC01560-202ENST00000624822 OR10D4PQ8NGN7 298 aa6.17□□□□□ -1.42
LINC01560-202ENST00000624822 PACRGQ96M98 296 aaPredicted RBP6.17□□□□□ -1.42
LINC01560-202ENST00000624822 A0A087WZ39 114 aa6.16□□□□□ -1.42
LINC01560-202ENST00000624822 A0A0J9YXV3 536 aa6.16□□□□□ -1.42
LINC01560-202ENST00000624822 ATP5LO75964 103 aa6.16□□□□□ -1.42
LINC01560-202ENST00000624822 SMR3BP02814 79 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms