RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 C15orf56Q8N910 161 aa12.14□□□□□ -0.47
CIRBP-245ENST00000621399 LRP1BQ9NZR2 4599 aa12.14□□□□□ -0.47
CIRBP-245ENST00000621399 A0A096LNJ9 63 aa12.13□□□□□ -0.47
CIRBP-245ENST00000621399 IGHV1-58A0A0C4DH39 117 aa12.12□□□□□ -0.47
CIRBP-245ENST00000621399 UBE2D1P51668 147 aa12.12□□□□□ -0.47
CIRBP-245ENST00000621399 HIGD2BQ4VC39 106 aa12.12□□□□□ -0.47
CIRBP-245ENST00000621399 C5orf38Q86SI9 138 aa12.12□□□□□ -0.47
CIRBP-245ENST00000621399 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.11□□□□□ -0.47
CIRBP-245ENST00000621399 LINC00242Q5T6M2 205 aa12.11□□□□□ -0.47
CIRBP-245ENST00000621399 KIAA1109Q2LD37 5005 aa12.11□□□□□ -0.47
CIRBP-245ENST00000621399 GVQW2A0A096LPI5 108 aaPredicted RBP12.1□□□□□ -0.47
CIRBP-245ENST00000621399 KRTAP10-1P60331 282 aa12.1□□□□□ -0.47
CIRBP-245ENST00000621399 IGHV3OR16-9A0A0B4J2B5 98 aa12.09□□□□□ -0.47
CIRBP-245ENST00000621399 HSBP1O75506 76 aa12.09□□□□□ -0.47
CIRBP-245ENST00000621399 PDZD11Q5EBL8 140 aa12.09□□□□□ -0.47
CIRBP-245ENST00000621399 APOMO95445 188 aa12.08□□□□□ -0.48
CIRBP-245ENST00000621399 COX6A2Q02221 97 aa12.08□□□□□ -0.48
CIRBP-245ENST00000621399 LINC01620Q4KN68 170 aa12.08□□□□□ -0.48
CIRBP-245ENST00000621399 CST9LQ9H4G1 147 aa12.08□□□□□ -0.48
CIRBP-245ENST00000621399 SERF1AO75920 110 aa12.07□□□□□ -0.48
CIRBP-245ENST00000621399 ATP5LO75964 103 aa12.07□□□□□ -0.48
CIRBP-245ENST00000621399 CNBPP62633 177 aaKnown RBP12.07□□□□□ -0.48
CIRBP-245ENST00000621399 SEC11AP67812 179 aa12.07□□□□□ -0.48
CIRBP-245ENST00000621399 PMVKQ15126 192 aa12.07□□□□□ -0.48
CIRBP-245ENST00000621399 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.06□□□□□ -0.48
CIRBP-245ENST00000621399 ZNF561-AS1K7EIQ3 104 aa12.06□□□□□ -0.48
CIRBP-245ENST00000621399 NDUFA6P56556 154 aa12.06□□□□□ -0.48
CIRBP-245ENST00000621399 FAM19A3Q7Z5A8 133 aa12.06□□□□□ -0.48
CIRBP-245ENST00000621399 FAM19A2Q8N3H0 131 aa12.06□□□□□ -0.48
CIRBP-245ENST00000621399 RYR1P21817 5038 aa12.06□□□□□ -0.48
CIRBP-245ENST00000621399 A0A087WZ39 114 aa12.05□□□□□ -0.48
CIRBP-245ENST00000621399 A0A0J9YXV3 536 aa12.05□□□□□ -0.48
CIRBP-245ENST00000621399 SLPIP03973 132 aa12.05□□□□□ -0.48
CIRBP-245ENST00000621399 HERVK_113P63121 156 aa12.05□□□□□ -0.48
CIRBP-245ENST00000621399 LINC00526Q96FQ7 95 aa12.05□□□□□ -0.48
CIRBP-245ENST00000621399 GEMIN7Q9H840 131 aaKnown RBP12.05□□□□□ -0.48
CIRBP-245ENST00000621399 HIST1H2BKO60814 126 aa12.04□□□□□ -0.48
CIRBP-245ENST00000621399 HIST1H2BJP06899 126 aa12.04□□□□□ -0.48
CIRBP-245ENST00000621399 HIST1H2BOP23527 126 aa12.04□□□□□ -0.48
CIRBP-245ENST00000621399 HIST1H2BBP33778 126 aa12.04□□□□□ -0.48
CIRBP-245ENST00000621399 HIST1H2BDP58876 126 aa12.04□□□□□ -0.48
CIRBP-245ENST00000621399 LINC00310P59036 64 aa12.04□□□□□ -0.48
CIRBP-245ENST00000621399 HIST1H2BCP62807 126 aa12.04□□□□□ -0.48
CIRBP-245ENST00000621399 HIST2H2BEQ16778 126 aa12.04□□□□□ -0.48
CIRBP-245ENST00000621399 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.04□□□□□ -0.48
CIRBP-245ENST00000621399 C9orf163Q8N9P6 203 aa12.04□□□□□ -0.48
CIRBP-245ENST00000621399 HIST1H2BHQ93079 126 aa12.04□□□□□ -0.48
CIRBP-245ENST00000621399 HIST1H2BNQ99877 126 aa12.04□□□□□ -0.48
CIRBP-245ENST00000621399 HIST1H2BMQ99879 126 aa12.04□□□□□ -0.48
CIRBP-245ENST00000621399 IGHV3-64A0A075B6Q5 118 aa12.03□□□□□ -0.48
CIRBP-245ENST00000621399 ORAOV1Q8WV07 137 aa12.03□□□□□ -0.48
CIRBP-245ENST00000621399 IGLV4-69A0A075B6H9 119 aa12.02□□□□□ -0.49
CIRBP-245ENST00000621399 NUPR1O60356 82 aa12.02□□□□□ -0.49
CIRBP-245ENST00000621399 CDK2AP2O75956 126 aa12.02□□□□□ -0.49
CIRBP-245ENST00000621399 SPAG11BQ08648 103 aa12.02□□□□□ -0.49
CIRBP-245ENST00000621399 OR10D4PQ8NGN7 298 aa12.02□□□□□ -0.49
CIRBP-245ENST00000621399 APOBP04114 4563 aaKnown RBP12.02□□□□□ -0.49
CIRBP-245ENST00000621399 TINCRA0A1B0GVN0 87 aa12.01□□□□□ -0.49
CIRBP-245ENST00000621399 LINC01561Q8N1V8 128 aa12.01□□□□□ -0.49
CIRBP-245ENST00000621399 LINC00469Q8N7U9 141 aa12□□□□□ -0.49
CIRBP-245ENST00000621399 IFI27L1Q96BM0 104 aa12□□□□□ -0.49
CIRBP-245ENST00000621399 CDKN2A-AS1Q9UH64 79 aa12□□□□□ -0.49
CIRBP-245ENST00000621399 SYCNQ0VAF6 134 aa11.99□□□□□ -0.49
CIRBP-245ENST00000621399 CAMK2N2Q96S95 79 aa11.99□□□□□ -0.49
CIRBP-245ENST00000621399 DNAH8Q96JB1 4490 aa11.99□□□□□ -0.49
CIRBP-245ENST00000621399 LEPROTL1O95214 131 aa11.98□□□□□ -0.49
CIRBP-245ENST00000621399 SDIM1Q6ZPB5 146 aa11.98□□□□□ -0.49
CIRBP-245ENST00000621399 C2orf48Q96LS8 159 aa11.98□□□□□ -0.49
CIRBP-245ENST00000621399 CARD19Q96LW7 228 aa11.98□□□□□ -0.49
CIRBP-245ENST00000621399 PACRGQ96M98 296 aaPredicted RBP11.98□□□□□ -0.49
CIRBP-245ENST00000621399 FAM30AQ9NZY2 134 aa11.98□□□□□ -0.49
CIRBP-245ENST00000621399 IGLV5-45A0A087WSX0 123 aa11.96□□□□□ -0.49
CIRBP-245ENST00000621399 IGLC3P0DOY3 106 aa11.96□□□□□ -0.49
CIRBP-245ENST00000621399 FABP4P15090 132 aa11.96□□□□□ -0.49
CIRBP-245ENST00000621399 CHAC1Q9BUX1 264 aa11.96□□□□□ -0.49
CIRBP-245ENST00000621399 XGP55808 180 aa11.95□□□□□ -0.5
CIRBP-245ENST00000621399 Q6ZRU5 148 aa11.95□□□□□ -0.5
CIRBP-245ENST00000621399 Q6ZSA8 131 aa11.95□□□□□ -0.5
CIRBP-245ENST00000621399 HSPB8Q9UJY1 196 aa11.95□□□□□ -0.5
CIRBP-245ENST00000621399 CHTOPQ9Y3Y2 248 aaKnown RBP11.95□□□□□ -0.5
CIRBP-245ENST00000621399 TRAV12-1A0A0B4J245 112 aa11.94□□□□□ -0.5
CIRBP-245ENST00000621399 F8WDY8 70 aa11.94□□□□□ -0.5
CIRBP-245ENST00000621399 H3BRM9 83 aa11.94□□□□□ -0.5
CIRBP-245ENST00000621399 PRSS2P07478 247 aa11.94□□□□□ -0.5
CIRBP-245ENST00000621399 TOMM7Q9P0U1 55 aa11.94□□□□□ -0.5
CIRBP-245ENST00000621399 NDUFA1O15239 70 aa11.93□□□□□ -0.5
CIRBP-245ENST00000621399 HAMPP81172 84 aa11.93□□□□□ -0.5
CIRBP-245ENST00000621399 KIAA0087Q14695 138 aa11.93□□□□□ -0.5
CIRBP-245ENST00000621399 HSPG2P98160 4391 aa11.92□□□□□ -0.5
CIRBP-245ENST00000621399 SMIM1B2RUZ4 78 aa11.92□□□□□ -0.5
CIRBP-245ENST00000621399 H0Y8G0 127 aa11.92□□□□□ -0.5
CIRBP-245ENST00000621399 SPINK8P0C7L1 97 aa11.92□□□□□ -0.5
CIRBP-245ENST00000621399 C6orf226Q5I0X4 101 aa11.92□□□□□ -0.5
CIRBP-245ENST00000621399 UNQ6190/PRO20217Q6UXQ8 127 aa11.91□□□□□ -0.5
CIRBP-245ENST00000621399 Q8IZM0 81 aa11.91□□□□□ -0.5
CIRBP-245ENST00000621399 PKIGQ9Y2B9 76 aa11.91□□□□□ -0.5
CIRBP-245ENST00000621399 C11orf86A6NJI1 115 aa11.9□□□□□ -0.5
CIRBP-245ENST00000621399 ZNF22P17026 224 aaPredicted RBP11.9□□□□□ -0.5
CIRBP-245ENST00000621399 CKS1BP61024 79 aa11.9□□□□□ -0.5
CIRBP-245ENST00000621399 COA6Q5JTJ3 125 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms