RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 A0A1W2PPM0 123 aa5.24□□□□□ -1.57
CLK1-215ENST00000621181 GAGE10A6NGK3 116 aa5.24□□□□□ -1.57
CLK1-215ENST00000621181 KRTAP29-1A8MX34 341 aaPredicted RBP5.24□□□□□ -1.57
CLK1-215ENST00000621181 F8VRH5 84 aa5.24□□□□□ -1.57
CLK1-215ENST00000621181 H3BUT2 72 aa5.24□□□□□ -1.57
CLK1-215ENST00000621181 H7C1H1 209 aa5.24□□□□□ -1.57
CLK1-215ENST00000621181 PLNP26678 52 aa5.24□□□□□ -1.57
CLK1-215ENST00000621181 ORMDL2Q53FV1 153 aa5.24□□□□□ -1.57
CLK1-215ENST00000621181 C14orf178Q8N769 122 aaPredicted RBP5.24□□□□□ -1.57
CLK1-215ENST00000621181 Q8N814 137 aa5.24□□□□□ -1.57
CLK1-215ENST00000621181 DEFB104AQ8WTQ1 72 aa5.24□□□□□ -1.57
CLK1-215ENST00000621181 Q9HAA7 133 aa5.24□□□□□ -1.57
CLK1-215ENST00000621181 FAM30AQ9NZY2 134 aa5.24□□□□□ -1.57
CLK1-215ENST00000621181 TRBV7-3A0A075B6L6 115 aa5.23□□□□□ -1.57
CLK1-215ENST00000621181 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.23□□□□□ -1.57
CLK1-215ENST00000621181 POLR2KP53803 58 aaKnown RBP5.23□□□□□ -1.57
CLK1-215ENST00000621181 TAL2Q16559 108 aa5.23□□□□□ -1.57
CLK1-215ENST00000621181 SERTAD4-AS1Q5TG53 156 aa5.23□□□□□ -1.57
CLK1-215ENST00000621181 CEND1Q8N111 149 aa5.23□□□□□ -1.57
CLK1-215ENST00000621181 SYT8Q8NBV8 401 aa5.23□□□□□ -1.57
CLK1-215ENST00000621181 PHLDA3Q9Y5J5 127 aa5.23□□□□□ -1.57
CLK1-215ENST00000621181 A0A1B0GWB2 263 aa5.23□□□□□ -1.57
CLK1-215ENST00000621181 TSHBP01222 138 aa5.23□□□□□ -1.57
CLK1-215ENST00000621181 SMIM13P0DJ93 91 aa5.23□□□□□ -1.57
CLK1-215ENST00000621181 GTF2H5Q6ZYL4 71 aa5.23□□□□□ -1.57
CLK1-215ENST00000621181 SH2D6Q7Z4S9 175 aa5.23□□□□□ -1.57
CLK1-215ENST00000621181 BAALCQ8WXS3 180 aa5.23□□□□□ -1.57
CLK1-215ENST00000621181 NAA38Q9BRA0 125 aaKnown RBP5.23□□□□□ -1.57
CLK1-215ENST00000621181 VPS13BQ7Z7G8 4022 aa5.23□□□□□ -1.57
CLK1-215ENST00000621181 IGIPA6NJ69 53 aa5.22□□□□□ -1.57
CLK1-215ENST00000621181 E9PLD3 99 aa5.22□□□□□ -1.57
CLK1-215ENST00000621181 PPP1R17O96001 155 aa5.22□□□□□ -1.57
CLK1-215ENST00000621181 S100A4P26447 101 aaKnown RBP5.22□□□□□ -1.57
CLK1-215ENST00000621181 LINC01556Q5JQF7 62 aa5.22□□□□□ -1.57
CLK1-215ENST00000621181 C2orf66Q6UXQ4 117 aa5.22□□□□□ -1.57
CLK1-215ENST00000621181 C9orf85Q96MD7 179 aa5.22□□□□□ -1.57
CLK1-215ENST00000621181 AP1S3Q96PC3 154 aa5.22□□□□□ -1.57
CLK1-215ENST00000621181 SCGB3A1Q96QR1 104 aa5.22□□□□□ -1.57
CLK1-215ENST00000621181 CHTOPQ9Y3Y2 248 aaKnown RBP5.22□□□□□ -1.57
CLK1-215ENST00000621181 IGHV3-16A0A0C4DH30 117 aa5.21□□□□□ -1.58
CLK1-215ENST00000621181 TRBV6-5A0A0K0K1A5 114 aa5.21□□□□□ -1.58
CLK1-215ENST00000621181 LOC100131303A0A0U1RQF7 123 aa5.21□□□□□ -1.58
CLK1-215ENST00000621181 IBA57-AS1B1ANH7 110 aa5.21□□□□□ -1.58
CLK1-215ENST00000621181 K7ERJ3 54 aa5.21□□□□□ -1.58
CLK1-215ENST00000621181 PCP4P48539 62 aa5.21□□□□□ -1.58
CLK1-215ENST00000621181 FAM159AQ6UWV7 190 aa5.21□□□□□ -1.58
CLK1-215ENST00000621181 OR5A1Q8NGJ0 315 aa5.21□□□□□ -1.58
CLK1-215ENST00000621181 RAB37Q96AX2 223 aa5.21□□□□□ -1.58
CLK1-215ENST00000621181 SPXQ9BT56 116 aa5.21□□□□□ -1.58
CLK1-215ENST00000621181 IGLV4-69A0A075B6H9 119 aa5.2□□□□□ -1.58
CLK1-215ENST00000621181 TRGV11A0A075B6L2 103 aa5.2□□□□□ -1.58
CLK1-215ENST00000621181 TRAV4A0A0B4J268 109 aa5.2□□□□□ -1.58
CLK1-215ENST00000621181 IGHV3-30P01768 117 aa5.2□□□□□ -1.58
CLK1-215ENST00000621181 IGHV3-33P01772 117 aa5.2□□□□□ -1.58
CLK1-215ENST00000621181 IGHV3-30-3P0DP02 117 aa5.2□□□□□ -1.58
CLK1-215ENST00000621181 IGHV3-30-5P0DP03 117 aa5.2□□□□□ -1.58
CLK1-215ENST00000621181 SUMO4Q6EEV6 95 aa5.2□□□□□ -1.58
CLK1-215ENST00000621181 JPT2Q9H910 190 aa5.2□□□□□ -1.58
CLK1-215ENST00000621181 SPCS1Q9Y6A9 102 aa5.2□□□□□ -1.58
CLK1-215ENST00000621181 MYMXA0A1B0GTQ4 84 aa5.2□□□□□ -1.58
CLK1-215ENST00000621181 MGPP08493 103 aa5.2□□□□□ -1.58
CLK1-215ENST00000621181 FABP2P12104 132 aa5.2□□□□□ -1.58
CLK1-215ENST00000621181 TIRAPP58753 221 aa5.2□□□□□ -1.58
CLK1-215ENST00000621181 Q6ZSA8 131 aa5.2□□□□□ -1.58
CLK1-215ENST00000621181 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.19□□□□□ -1.58
CLK1-215ENST00000621181 TRBV27A0A0K0K1C4 114 aa5.19□□□□□ -1.58
CLK1-215ENST00000621181 M0R2P5 195 aa5.19□□□□□ -1.58
CLK1-215ENST00000621181 ZFP2Q6ZN57 461 aa5.19□□□□□ -1.58
CLK1-215ENST00000621181 LINC01549A6NIU2 74 aa5.18□□□□□ -1.58
CLK1-215ENST00000621181 C11orf86A6NJI1 115 aa5.18□□□□□ -1.58
CLK1-215ENST00000621181 K7ERU9 68 aa5.18□□□□□ -1.58
CLK1-215ENST00000621181 M0QY20 66 aa5.18□□□□□ -1.58
CLK1-215ENST00000621181 VCYO14598 125 aa5.18□□□□□ -1.58
CLK1-215ENST00000621181 LECT2O14960 151 aa5.18□□□□□ -1.58
CLK1-215ENST00000621181 RNF151Q2KHN1 245 aa5.18□□□□□ -1.58
CLK1-215ENST00000621181 TIMM17AQ99595 171 aa5.18□□□□□ -1.58
CLK1-215ENST00000621181 PRADC1Q9BSG0 188 aa5.18□□□□□ -1.58
CLK1-215ENST00000621181 NHP2Q9NX24 153 aaKnown RBP5.18□□□□□ -1.58
CLK1-215ENST00000621181 PLA2G2DQ9UNK4 145 aa5.18□□□□□ -1.58
CLK1-215ENST00000621181 CYSLTR1Q9Y271 337 aa5.18□□□□□ -1.58
CLK1-215ENST00000621181 WFDC2Q14508 124 aa5.18□□□□□ -1.58
CLK1-215ENST00000621181 LELP1Q5T871 98 aa5.18□□□□□ -1.58
CLK1-215ENST00000621181 SCXQ7RTU7 201 aa5.18□□□□□ -1.58
CLK1-215ENST00000621181 TMEM141Q96I45 108 aa5.18□□□□□ -1.58
CLK1-215ENST00000621181 AMELXQ99217 191 aa5.18□□□□□ -1.58
CLK1-215ENST00000621181 A0A087WWL8 130 aa5.17□□□□□ -1.58
CLK1-215ENST00000621181 SDHAF1A6NFY7 115 aa5.17□□□□□ -1.58
CLK1-215ENST00000621181 UBE2D1P51668 147 aa5.17□□□□□ -1.58
CLK1-215ENST00000621181 PMVKQ15126 192 aa5.17□□□□□ -1.58
CLK1-215ENST00000621181 RHOHQ15669 191 aa5.17□□□□□ -1.58
CLK1-215ENST00000621181 C21orf62-AS1Q17RA5 79 aa5.17□□□□□ -1.58
CLK1-215ENST00000621181 ZNF876PQ49A33 203 aa5.17□□□□□ -1.58
CLK1-215ENST00000621181 LINC01620Q4KN68 170 aa5.17□□□□□ -1.58
CLK1-215ENST00000621181 SLC25A29Q8N8R3 303 aa5.17□□□□□ -1.58
CLK1-215ENST00000621181 PLEKHB2Q96CS7 222 aa5.17□□□□□ -1.58
CLK1-215ENST00000621181 PRO0461Q9UI25 63 aa5.17□□□□□ -1.58
CLK1-215ENST00000621181 TRAV8-3A0A0A6YYJ7 113 aa5.16□□□□□ -1.58
CLK1-215ENST00000621181 OXTP01178 125 aa5.16□□□□□ -1.58
CLK1-215ENST00000621181 RPL39P62891 51 aaKnown RBP5.16□□□□□ -1.58
CLK1-215ENST00000621181 HIST1H4GQ99525 98 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms