RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 SPACA4Q8TDM5 124 aa7.07□□□□□ -1.28
TARDBP-221ENST00000619555 OPRPNQ99935 248 aaPredicted RBP7.07□□□□□ -1.28
TARDBP-221ENST00000619555 ALKBH7Q9BT30 221 aaPredicted RBP7.07□□□□□ -1.28
TARDBP-221ENST00000619555 CSDC2Q9Y534 153 aaKnown RBP7.07□□□□□ -1.28
TARDBP-221ENST00000619555 LRP2P98164 4655 aa7.06□□□□□ -1.28
TARDBP-221ENST00000619555 LINC00959A0A1B0GUT2 108 aa7.06□□□□□ -1.28
TARDBP-221ENST00000619555 COX19Q49B96 90 aa7.06□□□□□ -1.28
TARDBP-221ENST00000619555 HIGD2BQ4VC39 106 aa7.06□□□□□ -1.28
TARDBP-221ENST00000619555 CFAP161Q6P656 301 aa7.06□□□□□ -1.28
TARDBP-221ENST00000619555 Q6ZRU5 148 aa7.06□□□□□ -1.28
TARDBP-221ENST00000619555 CHCHD10Q8WYQ3 142 aaPredicted RBP7.06□□□□□ -1.28
TARDBP-221ENST00000619555 TMEM101Q96IK0 257 aa7.06□□□□□ -1.28
TARDBP-221ENST00000619555 TIMM21Q9BVV7 248 aa7.06□□□□□ -1.28
TARDBP-221ENST00000619555 MT-ND6P03923 174 aa7.05□□□□□ -1.28
TARDBP-221ENST00000619555 RAB5AP20339 215 aa7.05□□□□□ -1.28
TARDBP-221ENST00000619555 COX6A2Q02221 97 aa7.05□□□□□ -1.28
TARDBP-221ENST00000619555 FABP9Q0Z7S8 132 aa7.05□□□□□ -1.28
TARDBP-221ENST00000619555 PRSS3P2Q8NHM4 247 aa7.05□□□□□ -1.28
TARDBP-221ENST00000619555 PLAC8Q9NZF1 115 aa7.05□□□□□ -1.28
TARDBP-221ENST00000619555 CCL25O15444 150 aa7.04□□□□□ -1.28
TARDBP-221ENST00000619555 FOXI1Q12951 378 aa7.04□□□□□ -1.28
TARDBP-221ENST00000619555 TMEM18Q96B42 140 aa7.04□□□□□ -1.28
TARDBP-221ENST00000619555 NXT2Q9NPJ8 142 aaKnown RBP7.04□□□□□ -1.28
TARDBP-221ENST00000619555 TRAPPC1Q9Y5R8 145 aa7.04□□□□□ -1.28
TARDBP-221ENST00000619555 IGKV2-24A0A0C4DH68 120 aa7.03□□□□□ -1.28
TARDBP-221ENST00000619555 XCL1P47992 114 aa7.03□□□□□ -1.28
TARDBP-221ENST00000619555 MAJINQ3KP22 176 aa7.03□□□□□ -1.28
TARDBP-221ENST00000619555 SPANXA1Q9NS26 97 aa7.03□□□□□ -1.28
TARDBP-221ENST00000619555 IGLV4-3A0A075B6K6 122 aa7.02□□□□□ -1.29
TARDBP-221ENST00000619555 LINC01546A6NGU7 62 aa7.02□□□□□ -1.29
TARDBP-221ENST00000619555 MRPS36P82909 103 aaKnown RBP7.02□□□□□ -1.29
TARDBP-221ENST00000619555 ZC2HC1BQ5TFG8 222 aa7.02□□□□□ -1.29
TARDBP-221ENST00000619555 C2orf66Q6UXQ4 117 aa7.02□□□□□ -1.29
TARDBP-221ENST00000619555 URB1-AS1Q96HZ7 61 aa7.02□□□□□ -1.29
TARDBP-221ENST00000619555 SMCO4Q9NRQ5 59 aa7.02□□□□□ -1.29
TARDBP-221ENST00000619555 PYGO1Q9Y3Y4 419 aa7.02□□□□□ -1.29
TARDBP-221ENST00000619555 GVQW2A0A096LPI5 108 aaPredicted RBP7.01□□□□□ -1.29
TARDBP-221ENST00000619555 TRAV13-1A0A0B4J241 112 aa7.01□□□□□ -1.29
TARDBP-221ENST00000619555 IGIPA6NJ69 53 aa7.01□□□□□ -1.29
TARDBP-221ENST00000619555 K7EMI3 77 aa7.01□□□□□ -1.29
TARDBP-221ENST00000619555 SMAGPQ0VAQ4 97 aa7.01□□□□□ -1.29
TARDBP-221ENST00000619555 SS18Q15532 418 aa7.01□□□□□ -1.29
TARDBP-221ENST00000619555 ORMDL2Q53FV1 153 aa7.01□□□□□ -1.29
TARDBP-221ENST00000619555 LINC00173Q6ZV60 143 aa7.01□□□□□ -1.29
TARDBP-221ENST00000619555 C18orf32Q8TCD1 76 aa7.01□□□□□ -1.29
TARDBP-221ENST00000619555 C7orf33Q8WU49 177 aa7.01□□□□□ -1.29
TARDBP-221ENST00000619555 CYSLTR1Q9Y271 337 aa7.01□□□□□ -1.29
TARDBP-221ENST00000619555 CD164L2Q6UWJ8 174 aa7□□□□□ -1.29
TARDBP-221ENST00000619555 STPG4Q8N801 248 aa7□□□□□ -1.29
TARDBP-221ENST00000619555 LINC00526Q96FQ7 95 aa7□□□□□ -1.29
TARDBP-221ENST00000619555 A0A096LNI7 61 aa6.99□□□□□ -1.29
TARDBP-221ENST00000619555 C1orf196B1AJZ1 125 aa6.99□□□□□ -1.29
TARDBP-221ENST00000619555 SCO1O75880 301 aa6.99□□□□□ -1.29
TARDBP-221ENST00000619555 TOMM6Q96B49 74 aa6.99□□□□□ -1.29
TARDBP-221ENST00000619555 TMEM141Q96I45 108 aa6.99□□□□□ -1.29
TARDBP-221ENST00000619555 A0A096LNJ9 63 aa6.98□□□□□ -1.29
TARDBP-221ENST00000619555 IFITM10A6NMD0 228 aa6.98□□□□□ -1.29
TARDBP-221ENST00000619555 PRR3P79522 188 aaKnown RBP6.98□□□□□ -1.29
TARDBP-221ENST00000619555 AMELXQ99217 191 aa6.98□□□□□ -1.29
TARDBP-221ENST00000619555 IGHV1-58A0A0C4DH39 117 aa6.97□□□□□ -1.29
TARDBP-221ENST00000619555 COLCA2A8K830 154 aa6.97□□□□□ -1.29
TARDBP-221ENST00000619555 ODF1Q14990 250 aa6.97□□□□□ -1.29
TARDBP-221ENST00000619555 FA2HQ7L5A8 372 aa6.97□□□□□ -1.29
TARDBP-221ENST00000619555 C5orf38Q86SI9 138 aa6.97□□□□□ -1.29
TARDBP-221ENST00000619555 RNF213Q63HN8 5207 aa6.96□□□□□ -1.29
TARDBP-221ENST00000619555 IGHV3OR16-9A0A0B4J2B5 98 aa6.96□□□□□ -1.3
TARDBP-221ENST00000619555 TRGC2P03986 189 aa6.96□□□□□ -1.3
TARDBP-221ENST00000619555 UBE2D1P51668 147 aa6.96□□□□□ -1.3
TARDBP-221ENST00000619555 PMCHL1Q16048 86 aa6.96□□□□□ -1.3
TARDBP-221ENST00000619555 LINC00242Q5T6M2 205 aa6.96□□□□□ -1.3
TARDBP-221ENST00000619555 TEX43Q6ZNM6 134 aa6.96□□□□□ -1.3
TARDBP-221ENST00000619555 LINC01600Q96MT4 127 aa6.96□□□□□ -1.3
TARDBP-221ENST00000619555 TIMM17AQ99595 171 aa6.96□□□□□ -1.3
TARDBP-221ENST00000619555 COX7A2LO14548 114 aa6.95□□□□□ -1.3
TARDBP-221ENST00000619555 NPSP0C0P6 89 aa6.95□□□□□ -1.3
TARDBP-221ENST00000619555 LINC00614P0C842 121 aa6.95□□□□□ -1.3
TARDBP-221ENST00000619555 ERASQ7Z444 233 aa6.95□□□□□ -1.3
TARDBP-221ENST00000619555 CARD19Q96LW7 228 aa6.95□□□□□ -1.3
TARDBP-221ENST00000619555 SCGB3A1Q96QR1 104 aa6.95□□□□□ -1.3
TARDBP-221ENST00000619555 SYCNQ0VAF6 134 aa6.94□□□□□ -1.3
TARDBP-221ENST00000619555 Q6ZN92 141 aa6.94□□□□□ -1.3
TARDBP-221ENST00000619555 VCX2Q9H322 139 aa6.94□□□□□ -1.3
TARDBP-221ENST00000619555 LINC00474Q9P2X8 69 aa6.94□□□□□ -1.3
TARDBP-221ENST00000619555 ZNF561-AS1K7EIQ3 104 aa6.93□□□□□ -1.3
TARDBP-221ENST00000619555 G0S2P27469 103 aa6.93□□□□□ -1.3
TARDBP-221ENST00000619555 LINC00310P59036 64 aa6.93□□□□□ -1.3
TARDBP-221ENST00000619555 FAM19A3Q7Z5A8 133 aa6.93□□□□□ -1.3
TARDBP-221ENST00000619555 C2orf88Q9BSF0 95 aa6.93□□□□□ -1.3
TARDBP-221ENST00000619555 IGLV4-69A0A075B6H9 119 aa6.92□□□□□ -1.3
TARDBP-221ENST00000619555 A0A0J9YXV3 536 aa6.92□□□□□ -1.3
TARDBP-221ENST00000619555 MALP21145 153 aa6.92□□□□□ -1.3
TARDBP-221ENST00000619555 KRTAP10-8P60410 259 aa6.92□□□□□ -1.3
TARDBP-221ENST00000619555 GAGE2BQ13066 116 aa6.92□□□□□ -1.3
TARDBP-221ENST00000619555 SRSF9Q13242 221 aaKnown RBP eCLIP6.92□□□□□ -1.3
TARDBP-221ENST00000619555 PDZD11Q5EBL8 140 aa6.92□□□□□ -1.3
TARDBP-221ENST00000619555 SPINK6Q6UWN8 80 aa6.92□□□□□ -1.3
TARDBP-221ENST00000619555 PKIGQ9Y2B9 76 aa6.92□□□□□ -1.3
TARDBP-221ENST00000619555 A0A087WZ39 114 aa6.91□□□□□ -1.3
TARDBP-221ENST00000619555 HBDP02042 147 aa6.91□□□□□ -1.3
TARDBP-221ENST00000619555 PTTG1IPP53801 180 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms