RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 LINC00336Q6ZUF6 198 aa15.02□□□□□ -0.01
CBWD3-213ENST00000618217 IFI27L1Q96BM0 104 aa15.02□□□□□ -0.01
CBWD3-213ENST00000618217 SPATA12Q7Z6I5 190 aa15□□□□□ -0.01
CBWD3-213ENST00000618217 BAALCQ8WXS3 180 aa15□□□□□ -0.01
CBWD3-213ENST00000618217 GAGE12HA6NDE8 117 aa14.99□□□□□ -0.01
CBWD3-213ENST00000618217 PRSS29PA6NIE9 313 aa14.99□□□□□ -0.01
CBWD3-213ENST00000618217 ATP5LO75964 103 aa14.99□□□□□ -0.01
CBWD3-213ENST00000618217 XCL1P47992 114 aa14.99□□□□□ -0.01
CBWD3-213ENST00000618217 UBE2D1P51668 147 aa14.99□□□□□ -0.01
CBWD3-213ENST00000618217 FOXI1Q12951 378 aa14.99□□□□□ -0.01
CBWD3-213ENST00000618217 PET117Q6UWS5 81 aa14.99□□□□□ -0.01
CBWD3-213ENST00000618217 CST9LQ9H4G1 147 aa14.99□□□□□ -0.01
CBWD3-213ENST00000618217 FAT2Q9NYQ8 4349 aa14.98□□□□□ -0.01
CBWD3-213ENST00000618217 C20orf202A1L168 122 aa14.98□□□□□ -0.01
CBWD3-213ENST00000618217 WFDC2Q14508 124 aa14.98□□□□□ -0.01
CBWD3-213ENST00000618217 CD164L2Q6UWJ8 174 aa14.98□□□□□ -0.01
CBWD3-213ENST00000618217 C2orf88Q9BSF0 95 aa14.98□□□□□ -0.01
CBWD3-213ENST00000618217 LINC00242Q5T6M2 205 aa14.97□□□□□ -0.01
CBWD3-213ENST00000618217 A0A087WTM6 91 aa14.96□□□□□ -0.01
CBWD3-213ENST00000618217 PMVKQ15126 192 aa14.96□□□□□ -0.01
CBWD3-213ENST00000618217 FAM19A3Q7Z5A8 133 aa14.96□□□□□ -0.01
CBWD3-213ENST00000618217 S100A12P80511 92 aa14.95□□□□□ -0.02
CBWD3-213ENST00000618217 IGHV3OR16-9A0A0B4J2B5 98 aa14.94□□□□□ -0.02
CBWD3-213ENST00000618217 COX6A2Q02221 97 aa14.94□□□□□ -0.02
CBWD3-213ENST00000618217 ATOH7Q8N100 152 aa14.93□□□□□ -0.02
CBWD3-213ENST00000618217 LECT2O14960 151 aa14.92□□□□□ -0.02
CBWD3-213ENST00000618217 PRSS1P07477 247 aa14.92□□□□□ -0.02
CBWD3-213ENST00000618217 LINC01545Q5VT33 79 aa14.92□□□□□ -0.02
CBWD3-213ENST00000618217 PMCHL2Q9BQD1 86 aa14.92□□□□□ -0.02
CBWD3-213ENST00000618217 A0A1B0GVY2 172 aa14.92□□□□□ -0.02
CBWD3-213ENST00000618217 A0A0J9YXV3 536 aa14.91□□□□□ -0.02
CBWD3-213ENST00000618217 USP17L23D6RBM5 183 aa14.91□□□□□ -0.02
CBWD3-213ENST00000618217 VAMP8Q9BV40 100 aa14.89□□□□□ -0.03
CBWD3-213ENST00000618217 TRAV12-1A0A0B4J245 112 aa14.88□□□□□ -0.03
CBWD3-213ENST00000618217 COX7A2LO14548 114 aa14.88□□□□□ -0.03
CBWD3-213ENST00000618217 C5orf38Q86SI9 138 aa14.88□□□□□ -0.03
CBWD3-213ENST00000618217 C15orf56Q8N910 161 aa14.88□□□□□ -0.03
CBWD3-213ENST00000618217 PKD1P98161 4303 aa14.88□□□□□ -0.03
CBWD3-213ENST00000618217 TINCRA0A1B0GVN0 87 aa14.88□□□□□ -0.03
CBWD3-213ENST00000618217 SEC11AP67812 179 aa14.88□□□□□ -0.03
CBWD3-213ENST00000618217 ODF1Q14990 250 aa14.87□□□□□ -0.03
CBWD3-213ENST00000618217 Q8N814 137 aa14.87□□□□□ -0.03
CBWD3-213ENST00000618217 PAM16Q9Y3D7 125 aa14.87□□□□□ -0.03
CBWD3-213ENST00000618217 IGLV4-69A0A075B6H9 119 aa14.86□□□□□ -0.03
CBWD3-213ENST00000618217 A0A087WZ39 114 aa14.86□□□□□ -0.03
CBWD3-213ENST00000618217 IGLV5-45A0A087WSX0 123 aa14.85□□□□□ -0.03
CBWD3-213ENST00000618217 IGLC3P0DOY3 106 aa14.85□□□□□ -0.03
CBWD3-213ENST00000618217 HERVK_113P63121 156 aa14.85□□□□□ -0.03
CBWD3-213ENST00000618217 EREGO14944 169 aa14.84□□□□□ -0.03
CBWD3-213ENST00000618217 CFAP161Q6P656 301 aa14.84□□□□□ -0.03
CBWD3-213ENST00000618217 GEMIN7Q9H840 131 aaKnown RBP14.84□□□□□ -0.03
CBWD3-213ENST00000618217 KRTAP10-2P60368 255 aa14.84□□□□□ -0.03
CBWD3-213ENST00000618217 MAJINQ3KP22 176 aa14.84□□□□□ -0.03
CBWD3-213ENST00000618217 PRO1933Q9H354 126 aa14.84□□□□□ -0.03
CBWD3-213ENST00000618217 CDKN2A-AS1Q9UH64 79 aa14.84□□□□□ -0.03
CBWD3-213ENST00000618217 DNAH11Q96DT5 4516 aa14.83□□□□□ -0.04
CBWD3-213ENST00000618217 IGHV1-58A0A0C4DH39 117 aa14.83□□□□□ -0.04
CBWD3-213ENST00000618217 PCP4L1A6NKN8 68 aa14.83□□□□□ -0.04
CBWD3-213ENST00000618217 C14orf177Q52M58 125 aa14.83□□□□□ -0.04
CBWD3-213ENST00000618217 CHTOPQ9Y3Y2 248 aaKnown RBP14.83□□□□□ -0.04
CBWD3-213ENST00000618217 GVQW2A0A096LPI5 108 aaPredicted RBP14.82□□□□□ -0.04
CBWD3-213ENST00000618217 MALP21145 153 aa14.82□□□□□ -0.04
CBWD3-213ENST00000618217 SPATA45Q537H7 98 aa14.81□□□□□ -0.04
CBWD3-213ENST00000618217 LINC01561Q8N1V8 128 aa14.81□□□□□ -0.04
CBWD3-213ENST00000618217 MRPL35Q9NZE8 188 aaKnown RBP14.81□□□□□ -0.04
CBWD3-213ENST00000618217 hDV102S1A0JD36 115 aa14.81□□□□□ -0.04
CBWD3-213ENST00000618217 C11orf86A6NJI1 115 aa14.81□□□□□ -0.04
CBWD3-213ENST00000618217 CHAC1Q9BUX1 264 aa14.81□□□□□ -0.04
CBWD3-213ENST00000618217 HECTD4Q9Y4D8 3996 aa14.8□□□□□ -0.04
CBWD3-213ENST00000618217 IGHV3-64A0A075B6Q5 118 aa14.8□□□□□ -0.04
CBWD3-213ENST00000618217 F8VRH5 84 aa14.8□□□□□ -0.04
CBWD3-213ENST00000618217 DPM2O94777 84 aa14.8□□□□□ -0.04
CBWD3-213ENST00000618217 LINC00469Q8N7U9 141 aa14.8□□□□□ -0.04
CBWD3-213ENST00000618217 HSBP1L1C9JCN9 74 aa14.79□□□□□ -0.04
CBWD3-213ENST00000618217 TSTD3H0UI37 97 aa14.79□□□□□ -0.04
CBWD3-213ENST00000618217 IGKCP01834 107 aa14.79□□□□□ -0.04
CBWD3-213ENST00000618217 HIGD2BQ4VC39 106 aa14.79□□□□□ -0.04
CBWD3-213ENST00000618217 FUSP35637 526 aaKnown RBP eCLIP14.78□□□□□ -0.04
CBWD3-213ENST00000618217 NTN5Q8WTR8 489 aaPredicted RBP14.78□□□□□ -0.04
CBWD3-213ENST00000618217 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.77□□□□□ -0.04
CBWD3-213ENST00000618217 APOMO95445 188 aa14.77□□□□□ -0.04
CBWD3-213ENST00000618217 SLPIP03973 132 aa14.77□□□□□ -0.04
CBWD3-213ENST00000618217 ZNF22P17026 224 aaPredicted RBP14.77□□□□□ -0.04
CBWD3-213ENST00000618217 PGPEP1Q9NXJ5 209 aa14.77□□□□□ -0.04
CBWD3-213ENST00000618217 PLNP26678 52 aa14.76□□□□□ -0.05
CBWD3-213ENST00000618217 LINC00526Q96FQ7 95 aa14.76□□□□□ -0.05
CBWD3-213ENST00000618217 SMIM1B2RUZ4 78 aa14.75□□□□□ -0.05
CBWD3-213ENST00000618217 ORAOV1Q8WV07 137 aa14.75□□□□□ -0.05
CBWD3-213ENST00000618217 CNBPP62633 177 aaKnown RBP14.74□□□□□ -0.05
CBWD3-213ENST00000618217 KIAA0087Q14695 138 aa14.74□□□□□ -0.05
CBWD3-213ENST00000618217 PKHD1P08F94 4074 aa14.73□□□□□ -0.05
CBWD3-213ENST00000618217 STPG4Q8N801 248 aa14.73□□□□□ -0.05
CBWD3-213ENST00000618217 H3BRM9 83 aa14.72□□□□□ -0.05
CBWD3-213ENST00000618217 ZNF561-AS1K7EIQ3 104 aa14.72□□□□□ -0.05
CBWD3-213ENST00000618217 SPAG11BQ08648 103 aa14.72□□□□□ -0.05
CBWD3-213ENST00000618217 IGLV5-52A0A0A0MRZ9 124 aa14.71□□□□□ -0.05
CBWD3-213ENST00000618217 SPINK8P0C7L1 97 aa14.71□□□□□ -0.05
CBWD3-213ENST00000618217 ANKRD39Q53RE8 183 aa14.71□□□□□ -0.05
CBWD3-213ENST00000618217 TMEM170BQ5T4T1 132 aa14.71□□□□□ -0.05
CBWD3-213ENST00000618217 C2orf48Q96LS8 159 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms