RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 EIF5A2Q9GZV4 153 aaKnown RBP2.93□□□□□ -1.94
CUL3-216ENST00000617432 PRR34Q9NV39 138 aa2.93□□□□□ -1.94
CUL3-216ENST00000617432 ZNF727A8MUV8 499 aa2.93□□□□□ -1.94
CUL3-216ENST00000617432 F2Z2F3 143 aa2.93□□□□□ -1.94
CUL3-216ENST00000617432 TMEM250H0YL14 139 aa2.93□□□□□ -1.94
CUL3-216ENST00000617432 TRGC1P0CF51 173 aa2.93□□□□□ -1.94
CUL3-216ENST00000617432 CHTF8P0CG12 524 aa2.93□□□□□ -1.94
CUL3-216ENST00000617432 HNRNPA3P51991 378 aaKnown RBP2.93□□□□□ -1.94
CUL3-216ENST00000617432 RPL23P62829 140 aaKnown RBP2.93□□□□□ -1.94
CUL3-216ENST00000617432 REG3AQ06141 175 aa2.93□□□□□ -1.94
CUL3-216ENST00000617432 FAM231DQ6ZW35 169 aa2.93□□□□□ -1.94
CUL3-216ENST00000617432 SMIM15Q7Z3B0 74 aa2.93□□□□□ -1.94
CUL3-216ENST00000617432 AMN1Q8IY45 258 aa2.93□□□□□ -1.94
CUL3-216ENST00000617432 CIRBP-AS1Q8TBR5 109 aa2.93□□□□□ -1.94
CUL3-216ENST00000617432 FRZBQ92765 325 aa2.93□□□□□ -1.94
CUL3-216ENST00000617432 TMEM243Q9BU79 118 aa2.93□□□□□ -1.94
CUL3-216ENST00000617432 CHCHD7Q9BUK0 85 aa2.93□□□□□ -1.94
CUL3-216ENST00000617432 NIT2Q9NQR4 276 aa2.93□□□□□ -1.94
CUL3-216ENST00000617432 TMEM242Q9NWH2 141 aa2.93□□□□□ -1.94
CUL3-216ENST00000617432 V9GYV3 84 aa2.93□□□□□ -1.94
CUL3-216ENST00000617432 FAM231BA6NCW3 169 aa2.92□□□□□ -1.94
CUL3-216ENST00000617432 HIGD1CA8MV81 97 aa2.92□□□□□ -1.94
CUL3-216ENST00000617432 TSHBP01222 138 aa2.92□□□□□ -1.94
CUL3-216ENST00000617432 SEC61BP60468 96 aaKnown RBP2.92□□□□□ -1.94
CUL3-216ENST00000617432 Q0VG73 95 aa2.92□□□□□ -1.94
CUL3-216ENST00000617432 ELOBQ15370 118 aa2.92□□□□□ -1.94
CUL3-216ENST00000617432 HIGD2BQ4VC39 106 aa2.92□□□□□ -1.94
CUL3-216ENST00000617432 RNASE13Q5GAN3 156 aaKnown RBP2.92□□□□□ -1.94
CUL3-216ENST00000617432 ZC2HC1BQ5TFG8 222 aa2.92□□□□□ -1.94
CUL3-216ENST00000617432 C15orf56Q8N910 161 aa2.92□□□□□ -1.94
CUL3-216ENST00000617432 RMI2Q96E14 147 aa2.92□□□□□ -1.94
CUL3-216ENST00000617432 LINC00526Q96FQ7 95 aa2.92□□□□□ -1.94
CUL3-216ENST00000617432 HERC1Q15751 4861 aa2.92□□□□□ -1.94
CUL3-216ENST00000617432 SDHAF1A6NFY7 115 aa2.91□□□□□ -1.94
CUL3-216ENST00000617432 H7C1H1 209 aa2.91□□□□□ -1.94
CUL3-216ENST00000617432 ADIRFQ15847 76 aa2.91□□□□□ -1.94
CUL3-216ENST00000617432 MIAQ16674 131 aa2.91□□□□□ -1.94
CUL3-216ENST00000617432 TEX261Q6UWH6 196 aa2.91□□□□□ -1.94
CUL3-216ENST00000617432 NUP35Q8NFH5 326 aa2.91□□□□□ -1.94
CUL3-216ENST00000617432 TSKUQ8WUA8 353 aa2.91□□□□□ -1.94
CUL3-216ENST00000617432 PACRGQ96M98 296 aaPredicted RBP2.91□□□□□ -1.94
CUL3-216ENST00000617432 CHAC1Q9BUX1 264 aa2.91□□□□□ -1.94
CUL3-216ENST00000617432 BIN3Q9NQY0 253 aa2.91□□□□□ -1.94
CUL3-216ENST00000617432 OSTCQ9NRP0 149 aa2.91□□□□□ -1.94
CUL3-216ENST00000617432 FLG2Q5D862 2391 aaPredicted RBP2.91□□□□□ -1.94
CUL3-216ENST00000617432 SRRM2Q9UQ35 2752 aaKnown RBP2.9□□□□□ -1.94
CUL3-216ENST00000617432 A0A1B0GUT8 65 aa2.9□□□□□ -1.95
CUL3-216ENST00000617432 A8MWL6 223 aa2.9□□□□□ -1.95
CUL3-216ENST00000617432 UBE2L6O14933 153 aa2.9□□□□□ -1.95
CUL3-216ENST00000617432 TSPAN13O95857 204 aa2.9□□□□□ -1.95
CUL3-216ENST00000617432 APCSP02743 223 aa2.9□□□□□ -1.95
CUL3-216ENST00000617432 FGF6P10767 208 aa2.9□□□□□ -1.95
CUL3-216ENST00000617432 ESDP10768 282 aa2.9□□□□□ -1.95
CUL3-216ENST00000617432 MRPL51Q4U2R6 128 aaKnown RBP2.9□□□□□ -1.95
CUL3-216ENST00000617432 TMEM97Q5BJF2 176 aa2.9□□□□□ -1.95
CUL3-216ENST00000617432 MRPL54Q6P161 138 aaKnown RBP2.9□□□□□ -1.95
CUL3-216ENST00000617432 LRP1Q07954 4544 aaKnown RBP2.9□□□□□ -1.95
CUL3-216ENST00000617432 TRBV6-5A0A0K0K1A5 114 aa2.89□□□□□ -1.95
CUL3-216ENST00000617432 TMEM238C9JI98 176 aa2.89□□□□□ -1.95
CUL3-216ENST00000617432 I3L3M4 83 aa2.89□□□□□ -1.95
CUL3-216ENST00000617432 PPP1R2P9O14990 202 aa2.89□□□□□ -1.95
CUL3-216ENST00000617432 XCL1P47992 114 aa2.89□□□□□ -1.95
CUL3-216ENST00000617432 POLR2KP53803 58 aaKnown RBP2.89□□□□□ -1.95
CUL3-216ENST00000617432 TMEM241Q24JQ0 296 aa2.89□□□□□ -1.95
CUL3-216ENST00000617432 PDZD11Q5EBL8 140 aa2.89□□□□□ -1.95
CUL3-216ENST00000617432 PAPPA-AS1Q5QFB9 102 aa2.89□□□□□ -1.95
CUL3-216ENST00000617432 AMMECR1LQ6DCA0 310 aa2.89□□□□□ -1.95
CUL3-216ENST00000617432 SDIM1Q6ZPB5 146 aa2.89□□□□□ -1.95
CUL3-216ENST00000617432 Q6ZUT4 128 aa2.89□□□□□ -1.95
CUL3-216ENST00000617432 MTURNQ8N3F0 131 aa2.89□□□□□ -1.95
CUL3-216ENST00000617432 C9orf163Q8N9P6 203 aa2.89□□□□□ -1.95
CUL3-216ENST00000617432 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.89□□□□□ -1.95
CUL3-216ENST00000617432 CHCHD10Q8WYQ3 142 aaPredicted RBP2.89□□□□□ -1.95
CUL3-216ENST00000617432 TMEM191AQ9H0A3 160 aa2.89□□□□□ -1.95
CUL3-216ENST00000617432 PKHD1L1Q86WI1 4243 aa2.89□□□□□ -1.95
CUL3-216ENST00000617432 LINC00959A0A1B0GUT2 108 aa2.88□□□□□ -1.95
CUL3-216ENST00000617432 A0A1B0GXF2 115 aa2.88□□□□□ -1.95
CUL3-216ENST00000617432 SMIM27A0A1W2PRY6 76 aa2.88□□□□□ -1.95
CUL3-216ENST00000617432 CCL25O15444 150 aa2.88□□□□□ -1.95
CUL3-216ENST00000617432 NPYP01303 97 aa2.88□□□□□ -1.95
CUL3-216ENST00000617432 PKIAP61925 76 aa2.88□□□□□ -1.95
CUL3-216ENST00000617432 RPL39P62891 51 aaKnown RBP2.88□□□□□ -1.95
CUL3-216ENST00000617432 FAM104AQ969W3 186 aa2.88□□□□□ -1.95
CUL3-216ENST00000617432 BORCS7Q96B45 105 aa2.88□□□□□ -1.95
CUL3-216ENST00000617432 OPRPNQ99935 248 aaPredicted RBP2.88□□□□□ -1.95
CUL3-216ENST00000617432 ST20Q9HBF5 79 aa2.88□□□□□ -1.95
CUL3-216ENST00000617432 NAT8Q9UHE5 227 aa2.88□□□□□ -1.95
CUL3-216ENST00000617432 FAT3Q8TDW7 4589 aa2.88□□□□□ -1.95
CUL3-216ENST00000617432 A0A096LNI7 61 aa2.87□□□□□ -1.95
CUL3-216ENST00000617432 TRAV8-4A0A0B4J246 113 aa2.87□□□□□ -1.95
CUL3-216ENST00000617432 IGKV2-24A0A0C4DH68 120 aa2.87□□□□□ -1.95
CUL3-216ENST00000617432 TRBV27A0A0K0K1C4 114 aa2.87□□□□□ -1.95
CUL3-216ENST00000617432 D6R8Y8 96 aa2.87□□□□□ -1.95
CUL3-216ENST00000617432 TCAPO15273 167 aa2.87□□□□□ -1.95
CUL3-216ENST00000617432 ADCYAP1P18509 176 aa2.87□□□□□ -1.95
CUL3-216ENST00000617432 DSCR10P59022 87 aa2.87□□□□□ -1.95
CUL3-216ENST00000617432 RPL37AP61513 92 aaKnown RBP2.87□□□□□ -1.95
CUL3-216ENST00000617432 CNBPP62633 177 aaKnown RBP2.87□□□□□ -1.95
CUL3-216ENST00000617432 IFITM2Q01629 132 aa2.87□□□□□ -1.95
CUL3-216ENST00000617432 COX6A2Q02221 97 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms