RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 TENM2Q9NT68 2774 aa5.41□□□□□ -1.54
NEK3-207ENST00000617054 J3QQQ9 107 aa5.41□□□□□ -1.54
NEK3-207ENST00000617054 K7ERJ3 54 aa5.41□□□□□ -1.54
NEK3-207ENST00000617054 PAPPA-AS1Q5QFB9 102 aa5.41□□□□□ -1.54
NEK3-207ENST00000617054 GEMIN7Q9H840 131 aaKnown RBP5.41□□□□□ -1.54
NEK3-207ENST00000617054 NANOS2P60321 138 aaKnown RBP5.41□□□□□ -1.54
NEK3-207ENST00000617054 LINC00242Q5T6M2 205 aa5.41□□□□□ -1.54
NEK3-207ENST00000617054 HIST1H4GQ99525 98 aa5.41□□□□□ -1.54
NEK3-207ENST00000617054 GTSF1LQ9H1H1 148 aa5.41□□□□□ -1.54
NEK3-207ENST00000617054 K7EIL1 84 aa5.4□□□□□ -1.54
NEK3-207ENST00000617054 IGHV3-30-3P0DP02 117 aa5.4□□□□□ -1.54
NEK3-207ENST00000617054 HERVK_113P61574 105 aa5.4□□□□□ -1.54
NEK3-207ENST00000617054 MRPL52Q86TS9 123 aaKnown RBP5.4□□□□□ -1.55
NEK3-207ENST00000617054 CIDEAO60543 219 aa5.4□□□□□ -1.55
NEK3-207ENST00000617054 LGALS3P17931 250 aaKnown RBP5.4□□□□□ -1.55
NEK3-207ENST00000617054 UBE2V1Q13404 147 aa5.4□□□□□ -1.55
NEK3-207ENST00000617054 ZNF625Q96I27 306 aaPredicted RBP5.4□□□□□ -1.55
NEK3-207ENST00000617054 TMEM101Q96IK0 257 aa5.4□□□□□ -1.55
NEK3-207ENST00000617054 TIMM21Q9BVV7 248 aa5.4□□□□□ -1.55
NEK3-207ENST00000617054 A0A0U1RRA0 63 aa5.39□□□□□ -1.55
NEK3-207ENST00000617054 TINCRA0A1B0GVN0 87 aa5.39□□□□□ -1.55
NEK3-207ENST00000617054 SIVA1O15304 175 aa5.39□□□□□ -1.55
NEK3-207ENST00000617054 ORAOV1Q8WV07 137 aa5.39□□□□□ -1.55
NEK3-207ENST00000617054 COX11Q9Y6N1 276 aa5.39□□□□□ -1.55
NEK3-207ENST00000617054 TAX1BP3O14907 124 aa5.39□□□□□ -1.55
NEK3-207ENST00000617054 EIF4EBP3O60516 100 aaPredicted RBP5.39□□□□□ -1.55
NEK3-207ENST00000617054 NPC2P61916 151 aa5.39□□□□□ -1.55
NEK3-207ENST00000617054 HSD52Q0P140 79 aa5.39□□□□□ -1.55
NEK3-207ENST00000617054 IGLV10-54A0A075B6I4 117 aa5.38□□□□□ -1.55
NEK3-207ENST00000617054 SRSF9Q13242 221 aaKnown RBP eCLIP5.38□□□□□ -1.55
NEK3-207ENST00000617054 SERTAD4-AS1Q5TG53 156 aa5.38□□□□□ -1.55
NEK3-207ENST00000617054 NHP2Q9NX24 153 aaKnown RBP5.38□□□□□ -1.55
NEK3-207ENST00000617054 C10orf126Q8N4M7 172 aa5.38□□□□□ -1.55
NEK3-207ENST00000617054 LEPROTO15243 131 aa5.38□□□□□ -1.55
NEK3-207ENST00000617054 RBX1P62877 108 aa5.38□□□□□ -1.55
NEK3-207ENST00000617054 CEND1Q8N111 149 aa5.38□□□□□ -1.55
NEK3-207ENST00000617054 DAND5Q8N907 189 aa5.38□□□□□ -1.55
NEK3-207ENST00000617054 C5orf38Q86SI9 138 aa5.37□□□□□ -1.55
NEK3-207ENST00000617054 CSDC2Q9Y534 153 aaKnown RBP5.37□□□□□ -1.55
NEK3-207ENST00000617054 IGHV1-58A0A0C4DH39 117 aa5.37□□□□□ -1.55
NEK3-207ENST00000617054 XCL1P47992 114 aa5.37□□□□□ -1.55
NEK3-207ENST00000617054 LINC00269Q8N2A0 174 aa5.37□□□□□ -1.55
NEK3-207ENST00000617054 HIGD1BQ9P298 99 aa5.37□□□□□ -1.55
NEK3-207ENST00000617054 PLA2G1BP04054 148 aaKnown RBP5.36□□□□□ -1.55
NEK3-207ENST00000617054 TOMM7Q9P0U1 55 aa5.36□□□□□ -1.55
NEK3-207ENST00000617054 SFTA2Q6UW10 78 aa5.36□□□□□ -1.55
NEK3-207ENST00000617054 C11orf68Q9H3H3 251 aaKnown RBP5.36□□□□□ -1.55
NEK3-207ENST00000617054 NDUFA12Q9UI09 145 aa5.36□□□□□ -1.55
NEK3-207ENST00000617054 PRKDCP78527 4128 aaKnown RBP5.36□□□□□ -1.55
NEK3-207ENST00000617054 ANGP03950 147 aaKnown RBP5.36□□□□□ -1.55
NEK3-207ENST00000617054 MRPL23Q16540 153 aaKnown RBP5.36□□□□□ -1.55
NEK3-207ENST00000617054 ADAMTSL4-AS1Q5T5F5 129 aa5.36□□□□□ -1.55
NEK3-207ENST00000617054 KPRPQ5T749 579 aaPredicted RBP5.36□□□□□ -1.55
NEK3-207ENST00000617054 C11orf45Q8TAV5 145 aa5.36□□□□□ -1.55
NEK3-207ENST00000617054 DNAH9Q9NYC9 4486 aa5.36□□□□□ -1.55
NEK3-207ENST00000617054 SMIM1B2RUZ4 78 aa5.35□□□□□ -1.55
NEK3-207ENST00000617054 H3BUT2 72 aa5.35□□□□□ -1.55
NEK3-207ENST00000617054 HERVK_113P63121 156 aa5.35□□□□□ -1.55
NEK3-207ENST00000617054 DNAH7Q8WXX0 4024 aa5.35□□□□□ -1.55
NEK3-207ENST00000617054 MEGF8Q7Z7M0 2845 aa5.35□□□□□ -1.55
NEK3-207ENST00000617054 A0A0J9YXY3 114 aa5.35□□□□□ -1.55
NEK3-207ENST00000617054 PRYO14603 147 aa5.35□□□□□ -1.55
NEK3-207ENST00000617054 IGHV3-30P01768 117 aa5.35□□□□□ -1.55
NEK3-207ENST00000617054 IGHV3-33P01772 117 aa5.35□□□□□ -1.55
NEK3-207ENST00000617054 PRSS2P07478 247 aa5.35□□□□□ -1.55
NEK3-207ENST00000617054 IGHV3-30-5P0DP03 117 aa5.35□□□□□ -1.55
NEK3-207ENST00000617054 VAMP3Q15836 100 aa5.35□□□□□ -1.55
NEK3-207ENST00000617054 ICOSQ9Y6W8 199 aa5.35□□□□□ -1.55
NEK3-207ENST00000617054 LINC00959A0A1B0GUT2 108 aa5.35□□□□□ -1.55
NEK3-207ENST00000617054 APOMO95445 188 aa5.35□□□□□ -1.55
NEK3-207ENST00000617054 SEC11AP67812 179 aa5.35□□□□□ -1.55
NEK3-207ENST00000617054 DEFB131BA0A096LNP1 70 aa5.34□□□□□ -1.55
NEK3-207ENST00000617054 A6NDN8 102 aa5.34□□□□□ -1.55
NEK3-207ENST00000617054 LYPD5Q6UWN5 251 aa5.34□□□□□ -1.55
NEK3-207ENST00000617054 TM2D2Q9BX73 214 aa5.34□□□□□ -1.55
NEK3-207ENST00000617054 Q9H8V8 135 aa5.34□□□□□ -1.55
NEK3-207ENST00000617054 GAGE10A6NGK3 116 aa5.34□□□□□ -1.55
NEK3-207ENST00000617054 H3BRM9 83 aa5.34□□□□□ -1.55
NEK3-207ENST00000617054 IGLV5-45A0A087WSX0 123 aa5.33□□□□□ -1.56
NEK3-207ENST00000617054 H7C423 109 aa5.33□□□□□ -1.56
NEK3-207ENST00000617054 SMIM13P0DJ93 91 aa5.33□□□□□ -1.56
NEK3-207ENST00000617054 WFDC10BQ8IUB3 73 aa5.33□□□□□ -1.56
NEK3-207ENST00000617054 MUSTN1Q8IVN3 82 aa5.33□□□□□ -1.56
NEK3-207ENST00000617054 KLK12Q9UKR0 248 aa5.33□□□□□ -1.56
NEK3-207ENST00000617054 IGHV3OR16-9A0A0B4J2B5 98 aa5.33□□□□□ -1.56
NEK3-207ENST00000617054 PCP4P48539 62 aa5.33□□□□□ -1.56
NEK3-207ENST00000617054 ESRGQ1W209 222 aa5.33□□□□□ -1.56
NEK3-207ENST00000617054 LINC00526Q96FQ7 95 aa5.32□□□□□ -1.56
NEK3-207ENST00000617054 LITAFQ99732 161 aa5.32□□□□□ -1.56
NEK3-207ENST00000617054 A0A1B0GUV1 79 aa5.32□□□□□ -1.56
NEK3-207ENST00000617054 REG3AQ06141 175 aa5.32□□□□□ -1.56
NEK3-207ENST00000617054 SMAGPQ0VAQ4 97 aa5.32□□□□□ -1.56
NEK3-207ENST00000617054 ZFAND6Q6FIF0 208 aa5.32□□□□□ -1.56
NEK3-207ENST00000617054 TM2D3Q9BRN9 247 aa5.32□□□□□ -1.56
NEK3-207ENST00000617054 IGLV5-39A0A0G2JS06 123 aa5.31□□□□□ -1.56
NEK3-207ENST00000617054 H7C2G1 150 aa5.31□□□□□ -1.56
NEK3-207ENST00000617054 LELP1Q5T871 98 aa5.31□□□□□ -1.56
NEK3-207ENST00000617054 C9orf118A6NHY6 69 aa5.31□□□□□ -1.56
NEK3-207ENST00000617054 C2orf82Q6UX34 121 aa5.31□□□□□ -1.56
NEK3-207ENST00000617054 FAM19A3Q7Z5A8 133 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms