RNA–Protein interactions for RNA: ENST00000616289.1

PDLIM2-219, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-219ENST00000616289 FAM74A3Q4VXF1 159 aa6.5□□□□□ -1.37
PDLIM2-219ENST00000616289 KRTAP11-1Q8IUC1 163 aa6.5□□□□□ -1.37
PDLIM2-219ENST00000616289 C20orf78Q9BR46 151 aa6.5□□□□□ -1.37
PDLIM2-219ENST00000616289 SMIM27A0A1W2PRY6 76 aa6.49□□□□□ -1.37
PDLIM2-219ENST00000616289 LINC00862A6NCI5 91 aa6.49□□□□□ -1.37
PDLIM2-219ENST00000616289 TNFRSF6BO95407 300 aa6.49□□□□□ -1.37
PDLIM2-219ENST00000616289 IGLV7-43P04211 117 aa6.49□□□□□ -1.37
PDLIM2-219ENST00000616289 CKS2P33552 79 aa6.49□□□□□ -1.37
PDLIM2-219ENST00000616289 RPL32P62910 135 aaKnown RBP6.49□□□□□ -1.37
PDLIM2-219ENST00000616289 ADIRFQ15847 76 aa6.49□□□□□ -1.37
PDLIM2-219ENST00000616289 TMEM241Q24JQ0 296 aa6.49□□□□□ -1.37
PDLIM2-219ENST00000616289 C10orf25Q5T742 122 aa6.49□□□□□ -1.37
PDLIM2-219ENST00000616289 SMIM2Q9BVW6 85 aa6.49□□□□□ -1.37
PDLIM2-219ENST00000616289 SPANXA1Q9NS26 97 aa6.49□□□□□ -1.37
PDLIM2-219ENST00000616289 IFITM10A6NMD0 228 aa6.48□□□□□ -1.37
PDLIM2-219ENST00000616289 C9JQL5 133 aa6.48□□□□□ -1.37
PDLIM2-219ENST00000616289 D6R8Y8 96 aa6.48□□□□□ -1.37
PDLIM2-219ENST00000616289 NDUFA1O15239 70 aa6.48□□□□□ -1.37
PDLIM2-219ENST00000616289 TCAPO15273 167 aa6.48□□□□□ -1.37
PDLIM2-219ENST00000616289 MRPS36P82909 103 aaKnown RBP6.48□□□□□ -1.37
PDLIM2-219ENST00000616289 FAM19A5Q7Z5A7 132 aaPredicted RBP6.48□□□□□ -1.37
PDLIM2-219ENST00000616289 PRR26Q8N8Z3 221 aa6.48□□□□□ -1.37
PDLIM2-219ENST00000616289 IMMP2LQ96T52 175 aa6.48□□□□□ -1.37
PDLIM2-219ENST00000616289 C6orf48Q9UBA6 75 aa6.48□□□□□ -1.37
PDLIM2-219ENST00000616289 F8WDY8 70 aa6.47□□□□□ -1.37
PDLIM2-219ENST00000616289 H0Y9J4 135 aa6.47□□□□□ -1.37
PDLIM2-219ENST00000616289 NPYP01303 97 aa6.47□□□□□ -1.37
PDLIM2-219ENST00000616289 TLX1NBP0CAT3 122 aa6.47□□□□□ -1.37
PDLIM2-219ENST00000616289 HBBP68871 147 aa6.47□□□□□ -1.37
PDLIM2-219ENST00000616289 MRPL54Q6P161 138 aaKnown RBP6.47□□□□□ -1.37
PDLIM2-219ENST00000616289 UNQ6190/PRO20217Q6UXQ8 127 aa6.47□□□□□ -1.37
PDLIM2-219ENST00000616289 KRTAP7-1Q8IUC3 87 aa6.47□□□□□ -1.37
PDLIM2-219ENST00000616289 DIRC1Q969H9 104 aa6.47□□□□□ -1.37
PDLIM2-219ENST00000616289 NAT8Q9UHE5 227 aa6.47□□□□□ -1.37
PDLIM2-219ENST00000616289 A0A087WZ39 114 aa6.46□□□□□ -1.38
PDLIM2-219ENST00000616289 A0A1B0GW15 77 aa6.46□□□□□ -1.38
PDLIM2-219ENST00000616289 SMDT1Q9H4I9 107 aa6.46□□□□□ -1.38
PDLIM2-219ENST00000616289 A0A1B0GXF2 115 aa6.45□□□□□ -1.38
PDLIM2-219ENST00000616289 SRSF3P84103 164 aaKnown RBP6.45□□□□□ -1.38
PDLIM2-219ENST00000616289 KIAA0087Q14695 138 aa6.45□□□□□ -1.38
PDLIM2-219ENST00000616289 GAGE2EQ4V326 116 aa6.45□□□□□ -1.38
PDLIM2-219ENST00000616289 GAGE2DQ9UEU5 116 aa6.45□□□□□ -1.38
PDLIM2-219ENST00000616289 MUC2Q02817 5179 aa6.44□□□□□ -1.38
PDLIM2-219ENST00000616289 TGIF2-C20orf24A0A0A6YYL0 155 aa6.44□□□□□ -1.38
PDLIM2-219ENST00000616289 F8W036 122 aa6.44□□□□□ -1.38
PDLIM2-219ENST00000616289 M0QXV9 152 aa6.44□□□□□ -1.38
PDLIM2-219ENST00000616289 KRTAP1-4P0C5Y4 121 aa6.44□□□□□ -1.38
PDLIM2-219ENST00000616289 IFI27P40305 119 aaPredicted RBP6.44□□□□□ -1.38
PDLIM2-219ENST00000616289 IFITM2Q01629 132 aa6.44□□□□□ -1.38
PDLIM2-219ENST00000616289 IGLV4-3A0A075B6K6 122 aa6.43□□□□□ -1.38
PDLIM2-219ENST00000616289 S100A8P05109 93 aa6.43□□□□□ -1.38
PDLIM2-219ENST00000616289 LINC00242Q5T6M2 205 aa6.43□□□□□ -1.38
PDLIM2-219ENST00000616289 C2orf82Q6UX34 121 aa6.43□□□□□ -1.38
PDLIM2-219ENST00000616289 NDUFC2-KCTD14E9PQ53 114 aa6.42□□□□□ -1.38
PDLIM2-219ENST00000616289 PPBPP02775 128 aa6.42□□□□□ -1.38
PDLIM2-219ENST00000616289 UBE2BP63146 152 aa6.42□□□□□ -1.38
PDLIM2-219ENST00000616289 C9orf129Q5T035 196 aaKnown RBP6.42□□□□□ -1.38
PDLIM2-219ENST00000616289 SLC7A5P1Q8MH63 180 aa6.42□□□□□ -1.38
PDLIM2-219ENST00000616289 ORMDL3Q8N138 153 aa6.42□□□□□ -1.38
PDLIM2-219ENST00000616289 PYGO1Q9Y3Y4 419 aa6.42□□□□□ -1.38
PDLIM2-219ENST00000616289 IGLV1-50A0A075B6I6 118 aa6.41□□□□□ -1.38
PDLIM2-219ENST00000616289 TRBV30A0A0K0K1B3 111 aa6.41□□□□□ -1.38
PDLIM2-219ENST00000616289 RAB5AP20339 215 aa6.41□□□□□ -1.38
PDLIM2-219ENST00000616289 PEA15Q15121 130 aa6.41□□□□□ -1.38
PDLIM2-219ENST00000616289 TMEM141Q96I45 108 aa6.41□□□□□ -1.38
PDLIM2-219ENST00000616289 PRELID3AQ96N28 172 aa6.41□□□□□ -1.38
PDLIM2-219ENST00000616289 UBE2D1P51668 147 aa6.4□□□□□ -1.38
PDLIM2-219ENST00000616289 ZC2HC1BQ5TFG8 222 aa6.4□□□□□ -1.38
PDLIM2-219ENST00000616289 TEX43Q6ZNM6 134 aa6.4□□□□□ -1.38
PDLIM2-219ENST00000616289 TMEM136Q6ZRR5 245 aa6.4□□□□□ -1.38
PDLIM2-219ENST00000616289 LOC389332A0A1B0GUA5 103 aa6.39□□□□□ -1.39
PDLIM2-219ENST00000616289 LINC00173Q6ZV60 143 aa6.39□□□□□ -1.39
PDLIM2-219ENST00000616289 ATP5L2Q7Z4Y8 100 aa6.39□□□□□ -1.39
PDLIM2-219ENST00000616289 PACRGQ96M98 296 aaPredicted RBP6.39□□□□□ -1.39
PDLIM2-219ENST00000616289 LINC01561Q8N1V8 128 aa6.38□□□□□ -1.39
PDLIM2-219ENST00000616289 C2orf88Q9BSF0 95 aa6.38□□□□□ -1.39
PDLIM2-219ENST00000616289 PRSS47A8MTI9 375 aa6.37□□□□□ -1.39
PDLIM2-219ENST00000616289 RPL13AP40429 203 aaKnown RBP6.37□□□□□ -1.39
PDLIM2-219ENST00000616289 PRR4Q16378 134 aa6.37□□□□□ -1.39
PDLIM2-219ENST00000616289 C2orf66Q6UXQ4 117 aa6.37□□□□□ -1.39
PDLIM2-219ENST00000616289 Q6ZN92 141 aa6.37□□□□□ -1.39
PDLIM2-219ENST00000616289 LINC00469Q8N7U9 141 aa6.37□□□□□ -1.39
PDLIM2-219ENST00000616289 AMELXQ99217 191 aa6.37□□□□□ -1.39
PDLIM2-219ENST00000616289 MAP1LC3AQ9H492 121 aa6.37□□□□□ -1.39
PDLIM2-219ENST00000616289 TOMM7Q9P0U1 55 aa6.37□□□□□ -1.39
PDLIM2-219ENST00000616289 CYSLTR1Q9Y271 337 aa6.37□□□□□ -1.39
PDLIM2-219ENST00000616289 LOC105371267A0A1B0GV96 52 aa6.36□□□□□ -1.39
PDLIM2-219ENST00000616289 PRSS2P07478 247 aa6.36□□□□□ -1.39
PDLIM2-219ENST00000616289 Q8IZM0 81 aa6.36□□□□□ -1.39
PDLIM2-219ENST00000616289 LAMTOR2Q9Y2Q5 125 aa6.36□□□□□ -1.39
PDLIM2-219ENST00000616289 ZNF861PO60384 105 aa6.35□□□□□ -1.39
PDLIM2-219ENST00000616289 CKS1BP61024 79 aa6.35□□□□□ -1.39
PDLIM2-219ENST00000616289 FAM19A3Q7Z5A8 133 aa6.35□□□□□ -1.39
PDLIM2-219ENST00000616289 Q8N8P6 123 aa6.35□□□□□ -1.39
PDLIM2-219ENST00000616289 VCX2Q9H322 139 aa6.35□□□□□ -1.39
PDLIM2-219ENST00000616289 XAGE1AQ9HD64 81 aa6.35□□□□□ -1.39
PDLIM2-219ENST00000616289 TMA7Q9Y2S6 64 aaKnown RBP6.35□□□□□ -1.39
PDLIM2-219ENST00000616289 C22orf24Q9Y442 160 aa6.35□□□□□ -1.39
PDLIM2-219ENST00000616289 IGIPA6NJ69 53 aa6.34□□□□□ -1.39
PDLIM2-219ENST00000616289 NUPR1O60356 82 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms