RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 IGHV3-64DA0A0J9YX35 117 aa3.35□□□□□ -1.87
HDDC2-208ENST00000609021 HCP5Q6MZN7 132 aa3.35□□□□□ -1.87
HDDC2-208ENST00000609021 DMXL2Q8TDJ6 3036 aa3.35□□□□□ -1.87
HDDC2-208ENST00000609021 ZNF292O60281 2723 aa3.35□□□□□ -1.87
HDDC2-208ENST00000609021 FSHBP01225 129 aa3.35□□□□□ -1.87
HDDC2-208ENST00000609021 IGHV1-69P01742 117 aa3.35□□□□□ -1.87
HDDC2-208ENST00000609021 SLPIP03973 132 aa3.35□□□□□ -1.87
HDDC2-208ENST00000609021 PRR3P79522 188 aaKnown RBP3.35□□□□□ -1.87
HDDC2-208ENST00000609021 GGNQ86UU5 652 aa3.35□□□□□ -1.87
HDDC2-208ENST00000609021 SPTBN4Q9H254 2564 aa3.34□□□□□ -1.87
HDDC2-208ENST00000609021 IGLV3-12A0A075B6K2 115 aa3.34□□□□□ -1.87
HDDC2-208ENST00000609021 K7EQD1 137 aa3.34□□□□□ -1.87
HDDC2-208ENST00000609021 SAA2P0DJI9 122 aaPredicted RBP3.34□□□□□ -1.87
HDDC2-208ENST00000609021 PDE6GP18545 87 aa3.34□□□□□ -1.87
HDDC2-208ENST00000609021 ACACAQ13085 2346 aa3.34□□□□□ -1.87
HDDC2-208ENST00000609021 MOBPQ13875 183 aa3.34□□□□□ -1.87
HDDC2-208ENST00000609021 DEFB110Q30KQ9 67 aa3.34□□□□□ -1.87
HDDC2-208ENST00000609021 IGKV3-11P04433 115 aa3.33□□□□□ -1.88
HDDC2-208ENST00000609021 RPL27AP46776 148 aaKnown RBP3.33□□□□□ -1.88
HDDC2-208ENST00000609021 LITAFQ99732 161 aa3.33□□□□□ -1.88
HDDC2-208ENST00000609021 LINC00574Q9H8X3 128 aa3.33□□□□□ -1.88
HDDC2-208ENST00000609021 ZNF469Q96JG9 3925 aaPredicted RBP3.33□□□□□ -1.88
HDDC2-208ENST00000609021 IGHV3OR16-13A0A075B7E8 117 aa3.33□□□□□ -1.88
HDDC2-208ENST00000609021 A0A087WYN8 130 aa3.33□□□□□ -1.88
HDDC2-208ENST00000609021 LOC101927531A0A1B0GV80 90 aa3.33□□□□□ -1.88
HDDC2-208ENST00000609021 OBSCN-AS1Q96MR7 158 aa3.33□□□□□ -1.88
HDDC2-208ENST00000609021 ITPR1Q14643 2758 aa3.33□□□□□ -1.88
HDDC2-208ENST00000609021 IGKV1D-37A0A075B6S9 117 aa3.33□□□□□ -1.88
HDDC2-208ENST00000609021 IGKV3D-20A0A0C4DH25 116 aa3.33□□□□□ -1.88
HDDC2-208ENST00000609021 TSHBP01222 138 aa3.33□□□□□ -1.88
HDDC2-208ENST00000609021 MRPS21P82921 87 aaKnown RBP3.33□□□□□ -1.88
HDDC2-208ENST00000609021 HIGD2BQ4VC39 106 aa3.33□□□□□ -1.88
HDDC2-208ENST00000609021 C22orf34Q6ZV56 151 aa3.33□□□□□ -1.88
HDDC2-208ENST00000609021 Q75L30 129 aa3.33□□□□□ -1.88
HDDC2-208ENST00000609021 ZNRF1Q8ND25 227 aa3.33□□□□□ -1.88
HDDC2-208ENST00000609021 CUBNO60494 3623 aa3.33□□□□□ -1.88
HDDC2-208ENST00000609021 IGHV1-3A0A0C4DH29 117 aa3.32□□□□□ -1.88
HDDC2-208ENST00000609021 FBXL19-AS1Q494R0 122 aa3.32□□□□□ -1.88
HDDC2-208ENST00000609021 C9orf129Q5T035 196 aaKnown RBP3.32□□□□□ -1.88
HDDC2-208ENST00000609021 C1orf134Q5TEV5 83 aa3.32□□□□□ -1.88
HDDC2-208ENST00000609021 Q6ZTI0 123 aa3.32□□□□□ -1.88
HDDC2-208ENST00000609021 CCL4L1Q8NHW4 92 aa3.32□□□□□ -1.88
HDDC2-208ENST00000609021 LINC01560Q8TB33 94 aa3.32□□□□□ -1.88
HDDC2-208ENST00000609021 EPG5Q9HCE0 2579 aa3.32□□□□□ -1.88
HDDC2-208ENST00000609021 ANKRD11Q6UB99 2663 aaPredicted RBP3.32□□□□□ -1.88
HDDC2-208ENST00000609021 IGHV3-15A0A0B4J1V0 119 aa3.32□□□□□ -1.88
HDDC2-208ENST00000609021 LINC00208Q96KT6 92 aa3.32□□□□□ -1.88
HDDC2-208ENST00000609021 B9D2Q9BPU9 175 aa3.32□□□□□ -1.88
HDDC2-208ENST00000609021 KRTAP17-1Q9BYP8 105 aa3.32□□□□□ -1.88
HDDC2-208ENST00000609021 SND1-IT1Q9HBX3 110 aa3.32□□□□□ -1.88
HDDC2-208ENST00000609021 NDUFA4L2Q9NRX3 87 aa3.32□□□□□ -1.88
HDDC2-208ENST00000609021 WNK2Q9Y3S1 2297 aa3.32□□□□□ -1.88
HDDC2-208ENST00000609021 C22orf24Q9Y442 160 aa3.32□□□□□ -1.88
HDDC2-208ENST00000609021 LINC00476Q8WZB0 136 aa3.32□□□□□ -1.88
HDDC2-208ENST00000609021 GAFA1Q96PS6 74 aa3.32□□□□□ -1.88
HDDC2-208ENST00000609021 ZNF580Q9UK33 172 aa3.32□□□□□ -1.88
HDDC2-208ENST00000609021 CSMD1Q96PZ7 3565 aa3.31□□□□□ -1.88
HDDC2-208ENST00000609021 IGHV3-72A0A0B4J1Y9 119 aa3.31□□□□□ -1.88
HDDC2-208ENST00000609021 PKD1L2Q7Z442 2459 aa3.31□□□□□ -1.88
HDDC2-208ENST00000609021 LORP23490 312 aaPredicted RBP3.31□□□□□ -1.88
HDDC2-208ENST00000609021 C18orf65Q6ZTR6 163 aa3.31□□□□□ -1.88
HDDC2-208ENST00000609021 Q8N9P0 234 aaPredicted RBP3.31□□□□□ -1.88
HDDC2-208ENST00000609021 DEC1Q9P2X7 70 aa3.31□□□□□ -1.88
HDDC2-208ENST00000609021 CACNA1EQ15878 2313 aa3.31□□□□□ -1.88
HDDC2-208ENST00000609021 MGAQ8IWI9 3026 aa3.31□□□□□ -1.88
HDDC2-208ENST00000609021 NDUFA1O15239 70 aa3.31□□□□□ -1.88
HDDC2-208ENST00000609021 SMIM11BQ8TCY0 68 aa3.31□□□□□ -1.88
HDDC2-208ENST00000609021 CDC42SE2Q9NRR3 84 aa3.31□□□□□ -1.88
HDDC2-208ENST00000609021 CSMD2Q7Z408 3487 aa3.3□□□□□ -1.88
HDDC2-208ENST00000609021 IGLV3-9A0A075B6K5 115 aa3.3□□□□□ -1.88
HDDC2-208ENST00000609021 TRBV6-5A0A0K0K1A5 114 aa3.3□□□□□ -1.88
HDDC2-208ENST00000609021 SPTY2D1-AS1A0A0U1RR47 76 aa3.3□□□□□ -1.88
HDDC2-208ENST00000609021 A0A1W2PNU3 283 aaPredicted RBP3.3□□□□□ -1.88
HDDC2-208ENST00000609021 B4DSR2 109 aa3.3□□□□□ -1.88
HDDC2-208ENST00000609021 APELAP0DMC3 54 aa3.3□□□□□ -1.88
HDDC2-208ENST00000609021 WT1-ASQ06250 92 aa3.3□□□□□ -1.88
HDDC2-208ENST00000609021 CHCHD10Q8WYQ3 142 aaPredicted RBP3.3□□□□□ -1.88
HDDC2-208ENST00000609021 WFDC10AQ9H1F0 79 aa3.3□□□□□ -1.88
HDDC2-208ENST00000609021 IGHV4-4A0A075B6R2 117 aa3.3□□□□□ -1.88
HDDC2-208ENST00000609021 CTSGP08311 255 aa3.3□□□□□ -1.88
HDDC2-208ENST00000609021 Q8N814 137 aa3.3□□□□□ -1.88
HDDC2-208ENST00000609021 PINLYPA6NC86 204 aa3.3□□□□□ -1.88
HDDC2-208ENST00000609021 IGHV4-31P0DP07 118 aa3.3□□□□□ -1.88
HDDC2-208ENST00000609021 LINC00158P58513 81 aa3.3□□□□□ -1.88
HDDC2-208ENST00000609021 SPAG11BQ08648 103 aa3.3□□□□□ -1.88
HDDC2-208ENST00000609021 C10orf55Q5SWW7 151 aa3.3□□□□□ -1.88
HDDC2-208ENST00000609021 SPAG11AQ6PDA7 123 aa3.3□□□□□ -1.88
HDDC2-208ENST00000609021 FGF23Q9GZV9 251 aaPredicted RBP3.3□□□□□ -1.88
HDDC2-208ENST00000609021 IGKV3D-11A0A0A0MRZ8 115 aa3.29□□□□□ -1.88
HDDC2-208ENST00000609021 IGKV2-29A2NJV5 120 aaPredicted RBP3.29□□□□□ -1.88
HDDC2-208ENST00000609021 H3BRN7 92 aa3.29□□□□□ -1.88
HDDC2-208ENST00000609021 LPAL2Q16609 132 aa3.29□□□□□ -1.88
HDDC2-208ENST00000609021 C20orf203Q8NBC4 194 aa3.29□□□□□ -1.88
HDDC2-208ENST00000609021 IGHV1-18A0A0C4DH31 117 aa3.29□□□□□ -1.88
HDDC2-208ENST00000609021 INAFM1C9JVW0 142 aa3.29□□□□□ -1.88
HDDC2-208ENST00000609021 PLA2G1BP04054 148 aaKnown RBP3.29□□□□□ -1.88
HDDC2-208ENST00000609021 NTM-AS1Q6ZSK4 140 aa3.29□□□□□ -1.88
HDDC2-208ENST00000609021 C9orf106Q8NAJ2 232 aa3.29□□□□□ -1.88
HDDC2-208ENST00000609021 SVEP1Q4LDE5 3571 aa3.29□□□□□ -1.88
HDDC2-208ENST00000609021 ZFYVE26Q68DK2 2539 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms