RNA–Protein interactions for RNA: ENST00000607427.1

CTSS-206, Transcript of cathepsin S, humanhuman

TSL 2

Gene CTSS, Length 390 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-206ENST00000607427 C10orf113Q5VZT2 155 aa-1.71□□□□□ -2.68
CTSS-206ENST00000607427 TMEM191AQ9H0A3 160 aa-1.71□□□□□ -2.68
CTSS-206ENST00000607427 ITPR3Q14573 2671 aa-1.72□□□□□ -2.68
CTSS-206ENST00000607427 DEFB112Q30KQ8 113 aa-1.72□□□□□ -2.68
CTSS-206ENST00000607427 TMEM263Q8WUH6 116 aaKnown RBP-1.72□□□□□ -2.68
CTSS-206ENST00000607427 TCEAL4Q96EI5 215 aa-1.72□□□□□ -2.68
CTSS-206ENST00000607427 PDCD10Q9BUL8 212 aa-1.72□□□□□ -2.68
CTSS-206ENST00000607427 FMN2Q9NZ56 1722 aa-1.72□□□□□ -2.69
CTSS-206ENST00000607427 PRRC2CQ9Y520 2896 aaKnown RBP-1.73□□□□□ -2.69
CTSS-206ENST00000607427 LZICQ8WZA0 190 aa-1.73□□□□□ -2.69
CTSS-206ENST00000607427 MYOM3Q5VTT5 1437 aa-1.74□□□□□ -2.69
CTSS-206ENST00000607427 HECTD1Q9ULT8 2610 aa-1.74□□□□□ -2.69
CTSS-206ENST00000607427 CPSF4LA6NMK7 179 aaKnown RBP-1.74□□□□□ -2.69
CTSS-206ENST00000607427 MGPP08493 103 aa-1.74□□□□□ -2.69
CTSS-206ENST00000607427 C12orf73Q69YU5 71 aa-1.74□□□□□ -2.69
CTSS-206ENST00000607427 CCDC167Q9P0B6 97 aa-1.74□□□□□ -2.69
CTSS-206ENST00000607427 COPZ2Q9P299 210 aa-1.74□□□□□ -2.69
CTSS-206ENST00000607427 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.75□□□□□ -2.69
CTSS-206ENST00000607427 IFNGP01579 166 aa-1.75□□□□□ -2.69
CTSS-206ENST00000607427 MRPL54Q6P161 138 aaKnown RBP-1.75□□□□□ -2.69
CTSS-206ENST00000607427 FDCSPQ8NFU4 85 aa-1.75□□□□□ -2.69
CTSS-206ENST00000607427 USMG5Q96IX5 58 aa-1.75□□□□□ -2.69
CTSS-206ENST00000607427 SPRR4Q96PI1 79 aa-1.75□□□□□ -2.69
CTSS-206ENST00000607427 AKAP9Q99996 3911 aa-1.75□□□□□ -2.69
CTSS-206ENST00000607427 DOPEY1Q5JWR5 2465 aa-1.76□□□□□ -2.69
CTSS-206ENST00000607427 SETBP1Q9Y6X0 1596 aa-1.76□□□□□ -2.69
CTSS-206ENST00000607427 B2MP61769 119 aa-1.76□□□□□ -2.69
CTSS-206ENST00000607427 PYDC1Q8WXC3 89 aa-1.76□□□□□ -2.69
CTSS-206ENST00000607427 LINC01600Q96MT4 127 aa-1.76□□□□□ -2.69
CTSS-206ENST00000607427 NAA60Q9H7X0 242 aa-1.76□□□□□ -2.69
CTSS-206ENST00000607427 CFTRP13569 1480 aa-1.76□□□□□ -2.69
CTSS-206ENST00000607427 MAGI1Q96QZ7 1491 aaPredicted RBP-1.76□□□□□ -2.69
CTSS-206ENST00000607427 KNL1Q8NG31 2342 aa-1.77□□□□□ -2.69
CTSS-206ENST00000607427 LOC285095A0A1B0GVY8 99 aa-1.77□□□□□ -2.69
CTSS-206ENST00000607427 IGLC1P0CG04 106 aa-1.77□□□□□ -2.69
CTSS-206ENST00000607427 UBA52P62987 128 aaKnown RBP-1.77□□□□□ -2.69
CTSS-206ENST00000607427 ANP32BQ92688 251 aaKnown RBP-1.77□□□□□ -2.69
CTSS-206ENST00000607427 FAT3Q8TDW7 4589 aa-1.78□□□□□ -2.69
CTSS-206ENST00000607427 SMIM21Q3B7S5 101 aa-1.78□□□□□ -2.69
CTSS-206ENST00000607427 FAIMQ9NVQ4 179 aa-1.78□□□□□ -2.69
CTSS-206ENST00000607427 SERP1Q9Y6X1 66 aa-1.78□□□□□ -2.69
CTSS-206ENST00000607427 DNAH3Q8TD57 4116 aa-1.78□□□□□ -2.69
CTSS-206ENST00000607427 LCN9Q8WX39 176 aa-1.79□□□□□ -2.7
CTSS-206ENST00000607427 COPS9Q8WXC6 57 aa-1.79□□□□□ -2.7
CTSS-206ENST00000607427 NXT2Q9NPJ8 142 aaKnown RBP-1.79□□□□□ -2.7
CTSS-206ENST00000607427 REV3LO60673 3130 aa-1.79□□□□□ -2.7
CTSS-206ENST00000607427 AKAP13Q12802 2813 aa-1.79□□□□□ -2.7
CTSS-206ENST00000607427 PAPPA2Q9BXP8 1791 aa-1.8□□□□□ -2.7
CTSS-206ENST00000607427 MYOM1P52179 1685 aa-1.8□□□□□ -2.7
CTSS-206ENST00000607427 ARHGEF5Q12774 1597 aa-1.8□□□□□ -2.7
CTSS-206ENST00000607427 MYO18BQ8IUG5 2567 aa-1.8□□□□□ -2.7
CTSS-206ENST00000607427 FASNP49327 2511 aaKnown RBP-1.8□□□□□ -2.7
CTSS-206ENST00000607427 GRIN2AQ12879 1464 aa-1.8□□□□□ -2.7
CTSS-206ENST00000607427 VPS13DQ5THJ4 4388 aa-1.8□□□□□ -2.7
CTSS-206ENST00000607427 H1FX-AS1Q4G0G2 97 aa-1.8□□□□□ -2.7
CTSS-206ENST00000607427 RERGLQ9H628 205 aa-1.8□□□□□ -2.7
CTSS-206ENST00000607427 MUC17Q685J3 4493 aa-1.8□□□□□ -2.7
CTSS-206ENST00000607427 PKHD1L1Q86WI1 4243 aa-1.8□□□□□ -2.7
CTSS-206ENST00000607427 CHKB-CPT1BH3BT56 60 aa-1.81□□□□□ -2.7
CTSS-206ENST00000607427 AKAP14Q86UN6 197 aa-1.81□□□□□ -2.7
CTSS-206ENST00000607427 FAM223AQ8IWN6 122 aa-1.81□□□□□ -2.7
CTSS-206ENST00000607427 C9orf62Q8N4C0 152 aa-1.81□□□□□ -2.7
CTSS-206ENST00000607427 SPRR2FQ96RM1 72 aa-1.81□□□□□ -2.7
CTSS-206ENST00000607427 SPANXDQ9BXN6 97 aa-1.81□□□□□ -2.7
CTSS-206ENST00000607427 CEP152O94986 1710 aa-1.81□□□□□ -2.7
CTSS-206ENST00000607427 EPPK1P58107 5090 aaKnown RBP-1.81□□□□□ -2.7
CTSS-206ENST00000607427 CPSF1Q10570 1443 aaKnown RBP-1.82□□□□□ -2.7
CTSS-206ENST00000607427 MYOZ3Q8TDC0 251 aa-1.82□□□□□ -2.7
CTSS-206ENST00000607427 CRIPTQ9P021 101 aa-1.82□□□□□ -2.7
CTSS-206ENST00000607427 LINC00474Q9P2X8 69 aa-1.82□□□□□ -2.7
CTSS-206ENST00000607427 ARL2-SNX15V9GYD0 113 aa-1.82□□□□□ -2.7
CTSS-206ENST00000607427 LAMA1P25391 3075 aa-1.82□□□□□ -2.7
CTSS-206ENST00000607427 MYH7P12883 1935 aa-1.82□□□□□ -2.7
CTSS-206ENST00000607427 TNRC18O15417 2968 aaPredicted RBP-1.83□□□□□ -2.7
CTSS-206ENST00000607427 TET3O43151 1660 aa-1.83□□□□□ -2.7
CTSS-206ENST00000607427 ARPC4P59998 168 aa-1.83□□□□□ -2.7
CTSS-206ENST00000607427 PPP3R2Q96LZ3 170 aa-1.83□□□□□ -2.7
CTSS-206ENST00000607427 LYSTQ99698 3801 aa-1.83□□□□□ -2.7
CTSS-206ENST00000607427 MIF4GDA9UHW6 222 aaKnown RBP-1.84□□□□□ -2.7
CTSS-206ENST00000607427 DR1Q01658 176 aa-1.84□□□□□ -2.7
CTSS-206ENST00000607427 FAM167A-AS1Q96KT0 104 aa-1.84□□□□□ -2.7
CTSS-206ENST00000607427 RYR3Q15413 4870 aa-1.84□□□□□ -2.7
CTSS-206ENST00000607427 TCHHQ07283 1943 aa-1.85□□□□□ -2.71
CTSS-206ENST00000607427 DNAH9Q9NYC9 4486 aa-1.85□□□□□ -2.71
CTSS-206ENST00000607427 C1orf167Q5SNV9 1468 aa-1.85□□□□□ -2.71
CTSS-206ENST00000607427 WHAMMP3Q1A5X7 153 aa-1.85□□□□□ -2.71
CTSS-206ENST00000607427 SNRNP25Q9BV90 132 aaKnown RBP-1.85□□□□□ -2.71
CTSS-206ENST00000607427 CDC42SE2Q9NRR3 84 aa-1.85□□□□□ -2.71
CTSS-206ENST00000607427 TEP1Q99973 2627 aaKnown RBP-1.85□□□□□ -2.71
CTSS-206ENST00000607427 ZZEF1O43149 2961 aa-1.85□□□□□ -2.71
CTSS-206ENST00000607427 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.85□□□□□ -2.71
CTSS-206ENST00000607427 MEIG1Q5JSS6 88 aa-1.86□□□□□ -2.71
CTSS-206ENST00000607427 COMMD6Q7Z4G1 85 aa-1.86□□□□□ -2.71
CTSS-206ENST00000607427 PRO1933Q9H354 126 aa-1.86□□□□□ -2.71
CTSS-206ENST00000607427 TRANK1O15050 2925 aa-1.86□□□□□ -2.71
CTSS-206ENST00000607427 LOC100130705A0A1B0GUX0 176 aa-1.87□□□□□ -2.71
CTSS-206ENST00000607427 PFDN5Q99471 154 aa-1.87□□□□□ -2.71
CTSS-206ENST00000607427 UQCR10Q9UDW1 63 aa-1.87□□□□□ -2.71
CTSS-206ENST00000607427 SHROOM2Q13796 1616 aa-1.88□□□□□ -2.71
CTSS-206ENST00000607427 DMXL1Q9Y485 3027 aa-1.88□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms