RNA–Protein interactions for RNA: ENST00000607320.5

RFTN1-212, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 3

Gene RFTN1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-212ENST00000607320 MRPL51Q4U2R6 128 aaKnown RBP6.68□□□□□ -1.34
RFTN1-212ENST00000607320 FAM104BQ5XKR9 115 aa6.68□□□□□ -1.34
RFTN1-212ENST00000607320 NAT8Q9UHE5 227 aa6.68□□□□□ -1.34
RFTN1-212ENST00000607320 UBE2D4Q9Y2X8 147 aa6.68□□□□□ -1.34
RFTN1-212ENST00000607320 TRAV13-1A0A0B4J241 112 aa6.67□□□□□ -1.34
RFTN1-212ENST00000607320 APOMO95445 188 aa6.67□□□□□ -1.34
RFTN1-212ENST00000607320 Q6ZRP5 223 aa6.67□□□□□ -1.34
RFTN1-212ENST00000607320 CAMK2N2Q96S95 79 aa6.67□□□□□ -1.34
RFTN1-212ENST00000607320 C20orf78Q9BR46 151 aa6.67□□□□□ -1.34
RFTN1-212ENST00000607320 TIMM21Q9BVV7 248 aa6.67□□□□□ -1.34
RFTN1-212ENST00000607320 TRBV24-1A0A075B6N3 115 aa6.66□□□□□ -1.34
RFTN1-212ENST00000607320 SMIM27A0A1W2PRY6 76 aa6.66□□□□□ -1.34
RFTN1-212ENST00000607320 S100A8P05109 93 aa6.66□□□□□ -1.34
RFTN1-212ENST00000607320 CKS2P33552 79 aa6.66□□□□□ -1.34
RFTN1-212ENST00000607320 RPL32P62910 135 aaKnown RBP6.66□□□□□ -1.34
RFTN1-212ENST00000607320 GAGE2BQ13066 116 aa6.66□□□□□ -1.34
RFTN1-212ENST00000607320 PEA15Q15121 130 aa6.66□□□□□ -1.34
RFTN1-212ENST00000607320 RNASE13Q5GAN3 156 aaKnown RBP6.66□□□□□ -1.34
RFTN1-212ENST00000607320 REG3GQ6UW15 175 aa6.66□□□□□ -1.34
RFTN1-212ENST00000607320 SPINK6Q6UWN8 80 aa6.66□□□□□ -1.34
RFTN1-212ENST00000607320 C2orf48Q96LS8 159 aa6.66□□□□□ -1.34
RFTN1-212ENST00000607320 LINC01600Q96MT4 127 aa6.66□□□□□ -1.34
RFTN1-212ENST00000607320 SMDT1Q9H4I9 107 aa6.66□□□□□ -1.34
RFTN1-212ENST00000607320 F8W036 122 aa6.65□□□□□ -1.34
RFTN1-212ENST00000607320 Q6ZUT4 128 aa6.65□□□□□ -1.34
RFTN1-212ENST00000607320 UBR4Q5T4S7 5183 aa6.64□□□□□ -1.35
RFTN1-212ENST00000607320 HBBP68871 147 aa6.64□□□□□ -1.35
RFTN1-212ENST00000607320 C5orf38Q86SI9 138 aa6.64□□□□□ -1.35
RFTN1-212ENST00000607320 SMIM2Q9BVW6 85 aa6.64□□□□□ -1.35
RFTN1-212ENST00000607320 SPANXA1Q9NS26 97 aa6.64□□□□□ -1.35
RFTN1-212ENST00000607320 TNXBP22105 4242 aa6.64□□□□□ -1.35
RFTN1-212ENST00000607320 C9JQL5 133 aa6.63□□□□□ -1.35
RFTN1-212ENST00000607320 PPBPP02775 128 aa6.63□□□□□ -1.35
RFTN1-212ENST00000607320 SPAG11BQ08648 103 aa6.63□□□□□ -1.35
RFTN1-212ENST00000607320 XP32Q5T750 250 aa6.63□□□□□ -1.35
RFTN1-212ENST00000607320 OR10D4PQ8NGN7 298 aa6.63□□□□□ -1.35
RFTN1-212ENST00000607320 A0A0J9YXV3 536 aa6.62□□□□□ -1.35
RFTN1-212ENST00000607320 D6R8Y8 96 aa6.62□□□□□ -1.35
RFTN1-212ENST00000607320 F8WDY8 70 aa6.62□□□□□ -1.35
RFTN1-212ENST00000607320 RPL39P62891 51 aaKnown RBP6.62□□□□□ -1.35
RFTN1-212ENST00000607320 RPL18AQ02543 176 aaKnown RBP6.62□□□□□ -1.35
RFTN1-212ENST00000607320 MRPL54Q6P161 138 aaKnown RBP6.62□□□□□ -1.35
RFTN1-212ENST00000607320 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.61□□□□□ -1.35
RFTN1-212ENST00000607320 MRPS36P82909 103 aaKnown RBP6.61□□□□□ -1.35
RFTN1-212ENST00000607320 SRSF9Q13242 221 aaKnown RBP eCLIP6.61□□□□□ -1.35
RFTN1-212ENST00000607320 C9orf116Q5BN46 136 aaPredicted RBP6.61□□□□□ -1.35
RFTN1-212ENST00000607320 ORAOV1Q8WV07 137 aa6.61□□□□□ -1.35
RFTN1-212ENST00000607320 MRPL35Q9NZE8 188 aaKnown RBP6.61□□□□□ -1.35
RFTN1-212ENST00000607320 IGHV3OR16-9A0A0B4J2B5 98 aa6.6□□□□□ -1.35
RFTN1-212ENST00000607320 A0A1B0GXF2 115 aa6.6□□□□□ -1.35
RFTN1-212ENST00000607320 A0A1W2PNN7 141 aa6.6□□□□□ -1.35
RFTN1-212ENST00000607320 IFITM10A6NMD0 228 aa6.6□□□□□ -1.35
RFTN1-212ENST00000607320 NDUFA1O15239 70 aa6.6□□□□□ -1.35
RFTN1-212ENST00000607320 NPYP01303 97 aa6.6□□□□□ -1.35
RFTN1-212ENST00000607320 RAB5AP20339 215 aa6.6□□□□□ -1.35
RFTN1-212ENST00000607320 ATP5L2Q7Z4Y8 100 aa6.6□□□□□ -1.35
RFTN1-212ENST00000607320 ORMDL3Q8N138 153 aa6.6□□□□□ -1.35
RFTN1-212ENST00000607320 IMMP2LQ96T52 175 aa6.6□□□□□ -1.35
RFTN1-212ENST00000607320 TGIF2-C20orf24A0A0A6YYL0 155 aa6.59□□□□□ -1.35
RFTN1-212ENST00000607320 A0A1B0GVG6 124 aa6.59□□□□□ -1.35
RFTN1-212ENST00000607320 MT-ND6P03923 174 aa6.59□□□□□ -1.35
RFTN1-212ENST00000607320 IFI27P40305 119 aaPredicted RBP6.59□□□□□ -1.35
RFTN1-212ENST00000607320 OPRPNQ99935 248 aaPredicted RBP6.59□□□□□ -1.35
RFTN1-212ENST00000607320 A4D1N5 150 aa6.58□□□□□ -1.36
RFTN1-212ENST00000607320 KRTAP10-8P60410 259 aa6.58□□□□□ -1.36
RFTN1-212ENST00000607320 TMEM136Q6ZRR5 245 aa6.58□□□□□ -1.36
RFTN1-212ENST00000607320 FAM104AQ969W3 186 aa6.58□□□□□ -1.36
RFTN1-212ENST00000607320 PRELID3AQ96N28 172 aa6.58□□□□□ -1.36
RFTN1-212ENST00000607320 PSORS1C2Q9UIG4 136 aa6.58□□□□□ -1.36
RFTN1-212ENST00000607320 PYGO1Q9Y3Y4 419 aa6.58□□□□□ -1.36
RFTN1-212ENST00000607320 TLX1NBP0CAT3 122 aa6.57□□□□□ -1.36
RFTN1-212ENST00000607320 C1orf137Q5JT78 98 aa6.57□□□□□ -1.36
RFTN1-212ENST00000607320 PHF5AQ7RTV0 110 aaKnown RBP6.57□□□□□ -1.36
RFTN1-212ENST00000607320 LAMTOR2Q9Y2Q5 125 aa6.57□□□□□ -1.36
RFTN1-212ENST00000607320 A0A087WZ39 114 aa6.56□□□□□ -1.36
RFTN1-212ENST00000607320 TMEM141Q96I45 108 aa6.56□□□□□ -1.36
RFTN1-212ENST00000607320 MAP1LC3AQ9H492 121 aa6.56□□□□□ -1.36
RFTN1-212ENST00000607320 IGLV4-3A0A075B6K6 122 aa6.55□□□□□ -1.36
RFTN1-212ENST00000607320 PNRC1Q12796 327 aaPredicted RBP6.55□□□□□ -1.36
RFTN1-212ENST00000607320 UNQ6190/PRO20217Q6UXQ8 127 aa6.55□□□□□ -1.36
RFTN1-212ENST00000607320 TEX43Q6ZNM6 134 aa6.55□□□□□ -1.36
RFTN1-212ENST00000607320 C2orf88Q9BSF0 95 aa6.55□□□□□ -1.36
RFTN1-212ENST00000607320 PAM16Q9Y3D7 125 aa6.55□□□□□ -1.36
RFTN1-212ENST00000607320 TRBV30A0A0K0K1B3 111 aa6.54□□□□□ -1.36
RFTN1-212ENST00000607320 LINC00242Q5T6M2 205 aa6.54□□□□□ -1.36
RFTN1-212ENST00000607320 C10orf25Q5T742 122 aa6.54□□□□□ -1.36
RFTN1-212ENST00000607320 Q6ZN92 141 aa6.54□□□□□ -1.36
RFTN1-212ENST00000607320 C6orf48Q9UBA6 75 aa6.54□□□□□ -1.36
RFTN1-212ENST00000607320 CYSLTR1Q9Y271 337 aa6.54□□□□□ -1.36
RFTN1-212ENST00000607320 LRP2P98164 4655 aa6.53□□□□□ -1.36
RFTN1-212ENST00000607320 LOC389332A0A1B0GUA5 103 aa6.53□□□□□ -1.36
RFTN1-212ENST00000607320 MT-ND4LP03901 98 aa6.53□□□□□ -1.36
RFTN1-212ENST00000607320 IGLV7-43P04211 117 aa6.53□□□□□ -1.36
RFTN1-212ENST00000607320 SNRPEP62304 92 aaKnown RBP6.53□□□□□ -1.36
RFTN1-212ENST00000607320 GAGE2EQ4V326 116 aa6.53□□□□□ -1.36
RFTN1-212ENST00000607320 FAM19A5Q7Z5A7 132 aaPredicted RBP6.53□□□□□ -1.36
RFTN1-212ENST00000607320 LINC01561Q8N1V8 128 aa6.53□□□□□ -1.36
RFTN1-212ENST00000607320 DIRC1Q969H9 104 aa6.53□□□□□ -1.36
RFTN1-212ENST00000607320 PACRGQ96M98 296 aaPredicted RBP6.53□□□□□ -1.36
RFTN1-212ENST00000607320 GAGE2DQ9UEU5 116 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms