RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 RNASEKQ6P5S7 137 aaKnown RBP9.24□□□□□ -0.93
SSBP4-214ENST00000607020 MAP1LC3AQ9H492 121 aa9.24□□□□□ -0.93
SSBP4-214ENST00000607020 PKIGQ9Y2B9 76 aa9.24□□□□□ -0.93
SSBP4-214ENST00000607020 HIGD2BQ4VC39 106 aa9.23□□□□□ -0.93
SSBP4-214ENST00000607020 MRPL52Q86TS9 123 aaKnown RBP9.23□□□□□ -0.93
SSBP4-214ENST00000607020 TMEM101Q96IK0 257 aa9.23□□□□□ -0.93
SSBP4-214ENST00000607020 LOC389332A0A1B0GUA5 103 aa9.22□□□□□ -0.93
SSBP4-214ENST00000607020 KIAA1644Q3SXP7 199 aa9.22□□□□□ -0.93
SSBP4-214ENST00000607020 OR5A1Q8NGJ0 315 aa9.22□□□□□ -0.93
SSBP4-214ENST00000607020 RAB5AP20339 215 aa9.21□□□□□ -0.94
SSBP4-214ENST00000607020 SMAGPQ0VAQ4 97 aa9.21□□□□□ -0.94
SSBP4-214ENST00000607020 TMEM18Q96B42 140 aa9.21□□□□□ -0.94
SSBP4-214ENST00000607020 MRPL18Q9H0U6 180 aaKnown RBP9.21□□□□□ -0.94
SSBP4-214ENST00000607020 Q8N8P6 123 aa9.2□□□□□ -0.94
SSBP4-214ENST00000607020 CHCHD10Q8WYQ3 142 aaPredicted RBP9.2□□□□□ -0.94
SSBP4-214ENST00000607020 YPEL4Q96NS1 127 aa9.2□□□□□ -0.94
SSBP4-214ENST00000607020 UBE2D4Q9Y2X8 147 aa9.2□□□□□ -0.94
SSBP4-214ENST00000607020 IGKV3OR2-268A0A0C4DH90 116 aa9.19□□□□□ -0.94
SSBP4-214ENST00000607020 FABP9Q0Z7S8 132 aa9.19□□□□□ -0.94
SSBP4-214ENST00000607020 CBLN2Q8IUK8 224 aa9.19□□□□□ -0.94
SSBP4-214ENST00000607020 ZNF664Q8N3J9 261 aa9.19□□□□□ -0.94
SSBP4-214ENST00000607020 ALKBH7Q9BT30 221 aaPredicted RBP9.19□□□□□ -0.94
SSBP4-214ENST00000607020 NXT2Q9NPJ8 142 aaKnown RBP9.19□□□□□ -0.94
SSBP4-214ENST00000607020 SMCO4Q9NRQ5 59 aa9.19□□□□□ -0.94
SSBP4-214ENST00000607020 CDC42SE2Q9NRR3 84 aa9.19□□□□□ -0.94
SSBP4-214ENST00000607020 PSORS1C2Q9UIG4 136 aa9.19□□□□□ -0.94
SSBP4-214ENST00000607020 CSDC2Q9Y534 153 aaKnown RBP9.19□□□□□ -0.94
SSBP4-214ENST00000607020 RPL39P62891 51 aaKnown RBP9.18□□□□□ -0.94
SSBP4-214ENST00000607020 TIMM21Q9BVV7 248 aa9.18□□□□□ -0.94
SSBP4-214ENST00000607020 K7EMI3 77 aa9.17□□□□□ -0.94
SSBP4-214ENST00000607020 IFI27P40305 119 aaPredicted RBP9.17□□□□□ -0.94
SSBP4-214ENST00000607020 FOXI1Q12951 378 aa9.17□□□□□ -0.94
SSBP4-214ENST00000607020 SPANXA1Q9NS26 97 aa9.17□□□□□ -0.94
SSBP4-214ENST00000607020 TRAPPC1Q9Y5R8 145 aa9.17□□□□□ -0.94
SSBP4-214ENST00000607020 A0A0U1RQV1 116 aa9.16□□□□□ -0.94
SSBP4-214ENST00000607020 ORMDL2Q53FV1 153 aa9.16□□□□□ -0.94
SSBP4-214ENST00000607020 Q6ZUT4 128 aa9.16□□□□□ -0.94
SSBP4-214ENST00000607020 LINC00959A0A1B0GUT2 108 aa9.14□□□□□ -0.95
SSBP4-214ENST00000607020 PTTG1IPP53801 180 aa9.14□□□□□ -0.95
SSBP4-214ENST00000607020 RNASE13Q5GAN3 156 aaKnown RBP9.14□□□□□ -0.95
SSBP4-214ENST00000607020 CARD19Q96LW7 228 aa9.14□□□□□ -0.95
SSBP4-214ENST00000607020 CYSLTR1Q9Y271 337 aa9.14□□□□□ -0.95
SSBP4-214ENST00000607020 FAT4Q6V0I7 4981 aa9.14□□□□□ -0.95
SSBP4-214ENST00000607020 IGHV1-58A0A0C4DH39 117 aa9.13□□□□□ -0.95
SSBP4-214ENST00000607020 MRPS36P82909 103 aaKnown RBP9.13□□□□□ -0.95
SSBP4-214ENST00000607020 C2orf66Q6UXQ4 117 aa9.13□□□□□ -0.95
SSBP4-214ENST00000607020 FAM104AQ969W3 186 aa9.13□□□□□ -0.95
SSBP4-214ENST00000607020 PYGO1Q9Y3Y4 419 aa9.13□□□□□ -0.95
SSBP4-214ENST00000607020 KRTAP9-6A0A140TA67 174 aa9.12□□□□□ -0.95
SSBP4-214ENST00000607020 LINC01546A6NGU7 62 aa9.12□□□□□ -0.95
SSBP4-214ENST00000607020 CCL25O15444 150 aa9.12□□□□□ -0.95
SSBP4-214ENST00000607020 XCL1P47992 114 aa9.12□□□□□ -0.95
SSBP4-214ENST00000607020 SS18Q15532 418 aa9.12□□□□□ -0.95
SSBP4-214ENST00000607020 OPRPNQ99935 248 aaPredicted RBP9.12□□□□□ -0.95
SSBP4-214ENST00000607020 A0A1W2PNN7 141 aa9.11□□□□□ -0.95
SSBP4-214ENST00000607020 G0S2P27469 103 aa9.11□□□□□ -0.95
SSBP4-214ENST00000607020 SYCNQ0VAF6 134 aa9.11□□□□□ -0.95
SSBP4-214ENST00000607020 PRR26Q8N8Z3 221 aa9.11□□□□□ -0.95
SSBP4-214ENST00000607020 IGLV4-3A0A075B6K6 122 aa9.1□□□□□ -0.95
SSBP4-214ENST00000607020 TRAV13-1A0A0B4J241 112 aa9.1□□□□□ -0.95
SSBP4-214ENST00000607020 C1orf196B1AJZ1 125 aa9.1□□□□□ -0.95
SSBP4-214ENST00000607020 LCE2AQ5TA79 106 aaPredicted RBP9.1□□□□□ -0.95
SSBP4-214ENST00000607020 CD164L2Q6UWJ8 174 aa9.1□□□□□ -0.95
SSBP4-214ENST00000607020 FA2HQ7L5A8 372 aa9.1□□□□□ -0.95
SSBP4-214ENST00000607020 C18orf32Q8TCD1 76 aa9.1□□□□□ -0.95
SSBP4-214ENST00000607020 LINC00526Q96FQ7 95 aa9.1□□□□□ -0.95
SSBP4-214ENST00000607020 LOC107984640A0A0U1RRK4 108 aa9.09□□□□□ -0.95
SSBP4-214ENST00000607020 IFITM10A6NMD0 228 aa9.09□□□□□ -0.95
SSBP4-214ENST00000607020 NPSP0C0P6 89 aa9.09□□□□□ -0.95
SSBP4-214ENST00000607020 TOMM6Q96B49 74 aa9.09□□□□□ -0.95
SSBP4-214ENST00000607020 IGIPA6NJ69 53 aa9.08□□□□□ -0.96
SSBP4-214ENST00000607020 ZNF561-AS1K7EIQ3 104 aa9.08□□□□□ -0.96
SSBP4-214ENST00000607020 DIRC1Q969H9 104 aa9.08□□□□□ -0.96
SSBP4-214ENST00000607020 TMEM141Q96I45 108 aa9.08□□□□□ -0.96
SSBP4-214ENST00000607020 IGLV1-50A0A075B6I6 118 aa9.07□□□□□ -0.96
SSBP4-214ENST00000607020 COLCA2A8K830 154 aa9.07□□□□□ -0.96
SSBP4-214ENST00000607020 GAGE2BQ13066 116 aa9.07□□□□□ -0.96
SSBP4-214ENST00000607020 Q6ZN92 141 aa9.07□□□□□ -0.96
SSBP4-214ENST00000607020 URB1-AS1Q96HZ7 61 aa9.07□□□□□ -0.96
SSBP4-214ENST00000607020 TIMM17AQ99595 171 aa9.07□□□□□ -0.96
SSBP4-214ENST00000607020 LINC01549A6NIU2 74 aa9.06□□□□□ -0.96
SSBP4-214ENST00000607020 SCO1O75880 301 aa9.06□□□□□ -0.96
SSBP4-214ENST00000607020 C9orf116Q5BN46 136 aaPredicted RBP9.06□□□□□ -0.96
SSBP4-214ENST00000607020 C1orf137Q5JT78 98 aa9.06□□□□□ -0.96
SSBP4-214ENST00000607020 TEX43Q6ZNM6 134 aa9.06□□□□□ -0.96
SSBP4-214ENST00000607020 COX7A2LO14548 114 aa9.05□□□□□ -0.96
SSBP4-214ENST00000607020 TRGC2P03986 189 aa9.05□□□□□ -0.96
SSBP4-214ENST00000607020 IGLV7-43P04211 117 aa9.05□□□□□ -0.96
SSBP4-214ENST00000607020 LINC00614P0C842 121 aa9.05□□□□□ -0.96
SSBP4-214ENST00000607020 RAB5BP61020 215 aa9.05□□□□□ -0.96
SSBP4-214ENST00000607020 PAPPA-AS1Q5QFB9 102 aa9.05□□□□□ -0.96
SSBP4-214ENST00000607020 LINC00173Q6ZV60 143 aa9.05□□□□□ -0.96
SSBP4-214ENST00000607020 ERASQ7Z444 233 aa9.05□□□□□ -0.96
SSBP4-214ENST00000607020 SCGB3A1Q96QR1 104 aa9.05□□□□□ -0.96
SSBP4-214ENST00000607020 AMELXQ99217 191 aa9.05□□□□□ -0.96
SSBP4-214ENST00000607020 C2orf88Q9BSF0 95 aa9.05□□□□□ -0.96
SSBP4-214ENST00000607020 VCX2Q9H322 139 aa9.05□□□□□ -0.96
SSBP4-214ENST00000607020 IGLV4-69A0A075B6H9 119 aa9.04□□□□□ -0.96
SSBP4-214ENST00000607020 A0A096LNJ9 63 aa9.03□□□□□ -0.96
SSBP4-214ENST00000607020 H0Y9J4 135 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms