RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 NDUFC2-KCTD14E9PQ53 114 aa8.94□□□□□ -0.98
NEDD8-MDP1-204ENST00000605847 TEX46H3BTG2 121 aa8.94□□□□□ -0.98
NEDD8-MDP1-204ENST00000605847 C9orf129Q5T035 196 aaKnown RBP8.94□□□□□ -0.98
NEDD8-MDP1-204ENST00000605847 PACRGQ96M98 296 aaPredicted RBP8.94□□□□□ -0.98
NEDD8-MDP1-204ENST00000605847 IGHV3OR16-9A0A0B4J2B5 98 aa8.93□□□□□ -0.98
NEDD8-MDP1-204ENST00000605847 TRBV30A0A0K0K1B3 111 aa8.93□□□□□ -0.98
NEDD8-MDP1-204ENST00000605847 LBHQ53QV2 105 aaPredicted RBP8.93□□□□□ -0.98
NEDD8-MDP1-204ENST00000605847 TIMM21Q9BVV7 248 aa8.92□□□□□ -0.98
NEDD8-MDP1-204ENST00000605847 PPDPFQ9H3Y8 114 aa8.92□□□□□ -0.98
NEDD8-MDP1-204ENST00000605847 ANAPC11Q9NYG5 84 aa8.92□□□□□ -0.98
NEDD8-MDP1-204ENST00000605847 A8MWL6 223 aa8.91□□□□□ -0.98
NEDD8-MDP1-204ENST00000605847 GATCO43716 136 aaKnown RBP8.91□□□□□ -0.98
NEDD8-MDP1-204ENST00000605847 TMEM191AQ9H0A3 160 aa8.91□□□□□ -0.98
NEDD8-MDP1-204ENST00000605847 C22orf24Q9Y442 160 aa8.91□□□□□ -0.98
NEDD8-MDP1-204ENST00000605847 TGIF2-C20orf24A0A0A6YYL0 155 aa8.9□□□□□ -0.98
NEDD8-MDP1-204ENST00000605847 KANTRA0A1W2PQU2 76 aa8.9□□□□□ -0.98
NEDD8-MDP1-204ENST00000605847 K7EN84 100 aa8.9□□□□□ -0.98
NEDD8-MDP1-204ENST00000605847 RAB4AP20338 218 aa8.9□□□□□ -0.98
NEDD8-MDP1-204ENST00000605847 ZNF345Q14585 488 aa8.9□□□□□ -0.98
NEDD8-MDP1-204ENST00000605847 BCE1O60756 84 aa8.89□□□□□ -0.99
NEDD8-MDP1-204ENST00000605847 PPP1R17O96001 155 aa8.89□□□□□ -0.99
NEDD8-MDP1-204ENST00000605847 SUMO2P61956 95 aaKnown RBP8.89□□□□□ -0.99
NEDD8-MDP1-204ENST00000605847 KRTAP13-2Q52LG2 175 aa8.89□□□□□ -0.99
NEDD8-MDP1-204ENST00000605847 C2orf82Q6UX34 121 aa8.89□□□□□ -0.99
NEDD8-MDP1-204ENST00000605847 OCC1Q8TAD7 63 aa8.89□□□□□ -0.99
NEDD8-MDP1-204ENST00000605847 IFITM10A6NMD0 228 aa8.88□□□□□ -0.99
NEDD8-MDP1-204ENST00000605847 SMKR1H3BMG3 65 aa8.88□□□□□ -0.99
NEDD8-MDP1-204ENST00000605847 KIAA0087Q14695 138 aa8.88□□□□□ -0.99
NEDD8-MDP1-204ENST00000605847 AMN1Q8IY45 258 aa8.88□□□□□ -0.99
NEDD8-MDP1-204ENST00000605847 LINC00337Q8N6G1 96 aa8.88□□□□□ -0.99
NEDD8-MDP1-204ENST00000605847 IGKV2D-26A0A0A0MRZ7 120 aa8.87□□□□□ -0.99
NEDD8-MDP1-204ENST00000605847 A0A1B0GUT8 65 aa8.87□□□□□ -0.99
NEDD8-MDP1-204ENST00000605847 HBBP68871 147 aa8.87□□□□□ -0.99
NEDD8-MDP1-204ENST00000605847 SMLR1H3BR10 107 aa8.86□□□□□ -0.99
NEDD8-MDP1-204ENST00000605847 PPP1R2P9O14990 202 aa8.86□□□□□ -0.99
NEDD8-MDP1-204ENST00000605847 CTAG1AP78358 180 aa8.86□□□□□ -0.99
NEDD8-MDP1-204ENST00000605847 LINC00242Q5T6M2 205 aa8.86□□□□□ -0.99
NEDD8-MDP1-204ENST00000605847 LINC00469Q8N7U9 141 aa8.86□□□□□ -0.99
NEDD8-MDP1-204ENST00000605847 ZNF727A8MUV8 499 aa8.85□□□□□ -0.99
NEDD8-MDP1-204ENST00000605847 RPL39P62891 51 aaKnown RBP8.85□□□□□ -0.99
NEDD8-MDP1-204ENST00000605847 FAM229BQ4G0N7 80 aa8.85□□□□□ -0.99
NEDD8-MDP1-204ENST00000605847 MRPL55Q7Z7F7 128 aaKnown RBP8.85□□□□□ -0.99
NEDD8-MDP1-204ENST00000605847 SPANXA1Q9NS26 97 aa8.85□□□□□ -0.99
NEDD8-MDP1-204ENST00000605847 ASB16-AS1Q495Z4 193 aa8.84□□□□□ -0.99
NEDD8-MDP1-204ENST00000605847 XAGE1AQ9HD64 81 aa8.84□□□□□ -0.99
NEDD8-MDP1-204ENST00000605847 HIGD1CA8MV81 97 aa8.83□□□□□ -1
NEDD8-MDP1-204ENST00000605847 TCAPO15273 167 aa8.83□□□□□ -1
NEDD8-MDP1-204ENST00000605847 UBE2AP49459 152 aa8.83□□□□□ -1
NEDD8-MDP1-204ENST00000605847 MRPS36P82909 103 aaKnown RBP8.83□□□□□ -1
NEDD8-MDP1-204ENST00000605847 CT83Q5H943 113 aa8.83□□□□□ -1
NEDD8-MDP1-204ENST00000605847 FAM231DQ6ZW35 169 aa8.83□□□□□ -1
NEDD8-MDP1-204ENST00000605847 NRACQ8N912 160 aa8.83□□□□□ -1
NEDD8-MDP1-204ENST00000605847 TP73-AS1Q9UF72 201 aa8.83□□□□□ -1
NEDD8-MDP1-204ENST00000605847 PRSS2P07478 247 aa8.82□□□□□ -1
NEDD8-MDP1-204ENST00000605847 TAGLN2P37802 199 aaKnown RBP8.81□□□□□ -1
NEDD8-MDP1-204ENST00000605847 CKS1BP61024 79 aa8.81□□□□□ -1
NEDD8-MDP1-204ENST00000605847 FAM104AQ969W3 186 aa8.81□□□□□ -1
NEDD8-MDP1-204ENST00000605847 RPL37AP8A6NKH3 93 aa8.8□□□□□ -1
NEDD8-MDP1-204ENST00000605847 HMSDA8MTL9 139 aa8.8□□□□□ -1
NEDD8-MDP1-204ENST00000605847 SEC61BP60468 96 aaKnown RBP8.8□□□□□ -1
NEDD8-MDP1-204ENST00000605847 RIGQ13278 110 aa8.79□□□□□ -1
NEDD8-MDP1-204ENST00000605847 FP248Q71RG6 208 aaPredicted RBP8.79□□□□□ -1
NEDD8-MDP1-204ENST00000605847 C20orf78Q9BR46 151 aa8.79□□□□□ -1
NEDD8-MDP1-204ENST00000605847 TOMM7Q9P0U1 55 aa8.79□□□□□ -1
NEDD8-MDP1-204ENST00000605847 IFI27P40305 119 aaPredicted RBP8.78□□□□□ -1
NEDD8-MDP1-204ENST00000605847 C6orf226Q5I0X4 101 aa8.78□□□□□ -1
NEDD8-MDP1-204ENST00000605847 LINC00167Q96N53 147 aa8.77□□□□□ -1.01
NEDD8-MDP1-204ENST00000605847 KRTAP4-1Q9BYQ7 146 aa8.77□□□□□ -1.01
NEDD8-MDP1-204ENST00000605847 MRPL51Q4U2R6 128 aaKnown RBP8.76□□□□□ -1.01
NEDD8-MDP1-204ENST00000605847 LINC01561Q8N1V8 128 aa8.76□□□□□ -1.01
NEDD8-MDP1-204ENST00000605847 LINC00862A6NCI5 91 aa8.75□□□□□ -1.01
NEDD8-MDP1-204ENST00000605847 GAGE10A6NGK3 116 aa8.75□□□□□ -1.01
NEDD8-MDP1-204ENST00000605847 RPL32P62910 135 aaKnown RBP8.75□□□□□ -1.01
NEDD8-MDP1-204ENST00000605847 SPAG11AQ6PDA7 123 aa8.75□□□□□ -1.01
NEDD8-MDP1-204ENST00000605847 Q6ZN92 141 aa8.75□□□□□ -1.01
NEDD8-MDP1-204ENST00000605847 CKS2P33552 79 aa8.74□□□□□ -1.01
NEDD8-MDP1-204ENST00000605847 CEBPGP53567 150 aa8.74□□□□□ -1.01
NEDD8-MDP1-204ENST00000605847 KRTAP13-3Q3SY46 172 aa8.74□□□□□ -1.01
NEDD8-MDP1-204ENST00000605847 FAM104BQ5XKR9 115 aa8.74□□□□□ -1.01
NEDD8-MDP1-204ENST00000605847 KRTAP13-1Q8IUC0 172 aa8.74□□□□□ -1.01
NEDD8-MDP1-204ENST00000605847 SMIM2Q9BVW6 85 aa8.74□□□□□ -1.01
NEDD8-MDP1-204ENST00000605847 TRBV24-1A0A075B6N3 115 aa8.73□□□□□ -1.01
NEDD8-MDP1-204ENST00000605847 TNFRSF6BO95407 300 aa8.73□□□□□ -1.01
NEDD8-MDP1-204ENST00000605847 TEX43Q6ZNM6 134 aa8.73□□□□□ -1.01
NEDD8-MDP1-204ENST00000605847 Q8IZM0 81 aa8.73□□□□□ -1.01
NEDD8-MDP1-204ENST00000605847 ALKBH7Q9BT30 221 aaPredicted RBP8.73□□□□□ -1.01
NEDD8-MDP1-204ENST00000605847 TMEM250H0YL14 139 aa8.72□□□□□ -1.01
NEDD8-MDP1-204ENST00000605847 PNRC1Q12796 327 aaPredicted RBP8.72□□□□□ -1.01
NEDD8-MDP1-204ENST00000605847 C4orf48Q5BLP8 95 aa8.72□□□□□ -1.01
NEDD8-MDP1-204ENST00000605847 TMEM141Q96I45 108 aa8.72□□□□□ -1.01
NEDD8-MDP1-204ENST00000605847 IGLV4-3A0A075B6K6 122 aa8.71□□□□□ -1.02
NEDD8-MDP1-204ENST00000605847 F8VRH5 84 aa8.71□□□□□ -1.02
NEDD8-MDP1-204ENST00000605847 CFC1BP0CG36 223 aa8.71□□□□□ -1.02
NEDD8-MDP1-204ENST00000605847 C3orf22Q8N5N4 141 aa8.71□□□□□ -1.02
NEDD8-MDP1-204ENST00000605847 NKAPP1Q8N9T2 125 aa8.71□□□□□ -1.02
NEDD8-MDP1-204ENST00000605847 C2orf88Q9BSF0 95 aa8.71□□□□□ -1.02
NEDD8-MDP1-204ENST00000605847 RAB5AP20339 215 aa8.7□□□□□ -1.02
NEDD8-MDP1-204ENST00000605847 OSTCQ9NRP0 149 aa8.7□□□□□ -1.02
NEDD8-MDP1-204ENST00000605847 PYGO1Q9Y3Y4 419 aa8.7□□□□□ -1.02
NEDD8-MDP1-204ENST00000605847 A0A1B0GVG6 124 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms