RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 DNAH8Q96JB1 4490 aa3.52□□□□□ -1.85
VRK3-226ENST00000602029 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.52□□□□□ -1.85
VRK3-226ENST00000602029 TRBV25-1A0A075B6N4 114 aa3.52□□□□□ -1.85
VRK3-226ENST00000602029 TRAV8-6A0A0B4J262 113 aa3.52□□□□□ -1.85
VRK3-226ENST00000602029 IGHV3-16A0A0C4DH30 117 aa3.52□□□□□ -1.85
VRK3-226ENST00000602029 A0A1B0GWB2 263 aa3.52□□□□□ -1.85
VRK3-226ENST00000602029 GAGE10A6NGK3 116 aa3.52□□□□□ -1.85
VRK3-226ENST00000602029 SMKR1H3BMG3 65 aa3.52□□□□□ -1.85
VRK3-226ENST00000602029 K7EP34 96 aa3.52□□□□□ -1.85
VRK3-226ENST00000602029 GHRHP01286 108 aa3.52□□□□□ -1.85
VRK3-226ENST00000602029 IGHV3-30P01768 117 aa3.52□□□□□ -1.85
VRK3-226ENST00000602029 IGHV3-33P01772 117 aa3.52□□□□□ -1.85
VRK3-226ENST00000602029 IGHV3-30-3P0DP02 117 aa3.52□□□□□ -1.85
VRK3-226ENST00000602029 IGHV3-30-5P0DP03 117 aa3.52□□□□□ -1.85
VRK3-226ENST00000602029 FABP2P12104 132 aa3.52□□□□□ -1.85
VRK3-226ENST00000602029 NMUP48645 174 aa3.52□□□□□ -1.85
VRK3-226ENST00000602029 POLR2KP53803 58 aaKnown RBP3.52□□□□□ -1.85
VRK3-226ENST00000602029 ANXA2RQ3ZCQ2 193 aa3.52□□□□□ -1.85
VRK3-226ENST00000602029 PRR9Q5T870 116 aa3.52□□□□□ -1.85
VRK3-226ENST00000602029 UFSP1Q6NVU6 142 aa3.52□□□□□ -1.85
VRK3-226ENST00000602029 CEND1Q8N111 149 aa3.52□□□□□ -1.85
VRK3-226ENST00000602029 NEXN-AS1Q8NBZ9 246 aa3.52□□□□□ -1.85
VRK3-226ENST00000602029 RASL10AQ92737 203 aa3.52□□□□□ -1.85
VRK3-226ENST00000602029 SCGB3A1Q96QR1 104 aa3.52□□□□□ -1.85
VRK3-226ENST00000602029 CHAC1Q9BUX1 264 aa3.52□□□□□ -1.85
VRK3-226ENST00000602029 MRPL35Q9NZE8 188 aaKnown RBP3.52□□□□□ -1.85
VRK3-226ENST00000602029 CHTOPQ9Y3Y2 248 aaKnown RBP3.52□□□□□ -1.85
VRK3-226ENST00000602029 KIF25-AS1Q9Y6Z4 181 aa3.52□□□□□ -1.85
VRK3-226ENST00000602029 IGHV3-38A0A0C4DH36 116 aa3.51□□□□□ -1.85
VRK3-226ENST00000602029 A0A1W2PPM0 123 aa3.51□□□□□ -1.85
VRK3-226ENST00000602029 C11orf86A6NJI1 115 aa3.51□□□□□ -1.85
VRK3-226ENST00000602029 K7EQD1 137 aa3.51□□□□□ -1.85
VRK3-226ENST00000602029 LECT2O14960 151 aa3.51□□□□□ -1.85
VRK3-226ENST00000602029 FHL2Q14192 279 aa3.51□□□□□ -1.85
VRK3-226ENST00000602029 PMVKQ15126 192 aa3.51□□□□□ -1.85
VRK3-226ENST00000602029 AMMECR1LQ6DCA0 310 aa3.51□□□□□ -1.85
VRK3-226ENST00000602029 C2orf66Q6UXQ4 117 aa3.51□□□□□ -1.85
VRK3-226ENST00000602029 C11orf72Q8NBR9 251 aa3.51□□□□□ -1.85
VRK3-226ENST00000602029 NTN5Q8WTR8 489 aaPredicted RBP3.51□□□□□ -1.85
VRK3-226ENST00000602029 ZNF479Q96JC4 524 aa3.51□□□□□ -1.85
VRK3-226ENST00000602029 CST9LQ9H4G1 147 aa3.51□□□□□ -1.85
VRK3-226ENST00000602029 SPANXB1Q9NS25 103 aaPredicted RBP3.51□□□□□ -1.85
VRK3-226ENST00000602029 TP73-AS1Q9UF72 201 aa3.51□□□□□ -1.85
VRK3-226ENST00000602029 PYGO1Q9Y3Y4 419 aa3.51□□□□□ -1.85
VRK3-226ENST00000602029 TNXBP22105 4242 aa3.51□□□□□ -1.85
VRK3-226ENST00000602029 IGHV3-73A0A0B4J1V6 119 aa3.5□□□□□ -1.85
VRK3-226ENST00000602029 LOC100131303A0A0U1RQF7 123 aa3.5□□□□□ -1.85
VRK3-226ENST00000602029 KRTAP9-6A0A140TA67 174 aa3.5□□□□□ -1.85
VRK3-226ENST00000602029 MYMXA0A1B0GTQ4 84 aa3.5□□□□□ -1.85
VRK3-226ENST00000602029 IGIPA6NJ69 53 aa3.5□□□□□ -1.85
VRK3-226ENST00000602029 A8MWV9 139 aa3.5□□□□□ -1.85
VRK3-226ENST00000602029 F8W1H4 67 aa3.5□□□□□ -1.85
VRK3-226ENST00000602029 J3QR89 54 aa3.5□□□□□ -1.85
VRK3-226ENST00000602029 RHODO00212 210 aa3.5□□□□□ -1.85
VRK3-226ENST00000602029 SMAGPQ0VAQ4 97 aa3.5□□□□□ -1.85
VRK3-226ENST00000602029 OCIAD2Q56VL3 154 aa3.5□□□□□ -1.85
VRK3-226ENST00000602029 SH2D6Q7Z4S9 175 aa3.5□□□□□ -1.85
VRK3-226ENST00000602029 PCP2Q8IVA1 136 aa3.5□□□□□ -1.85
VRK3-226ENST00000602029 BAALCQ8WXS3 180 aa3.5□□□□□ -1.85
VRK3-226ENST00000602029 DNAJC30Q96LL9 226 aa3.5□□□□□ -1.85
VRK3-226ENST00000602029 PRADC1Q9BSG0 188 aa3.5□□□□□ -1.85
VRK3-226ENST00000602029 KRTAP9-2Q9BYQ4 174 aa3.5□□□□□ -1.85
VRK3-226ENST00000602029 FAT4Q6V0I7 4981 aa3.5□□□□□ -1.85
VRK3-226ENST00000602029 SDHAF1A6NFY7 115 aa3.49□□□□□ -1.85
VRK3-226ENST00000602029 I3L3M4 83 aa3.49□□□□□ -1.85
VRK3-226ENST00000602029 EIF4EBP3O60516 100 aaPredicted RBP3.49□□□□□ -1.85
VRK3-226ENST00000602029 CIDEAO60543 219 aa3.49□□□□□ -1.85
VRK3-226ENST00000602029 MGPP08493 103 aa3.49□□□□□ -1.85
VRK3-226ENST00000602029 GATA1P15976 413 aaPredicted RBP3.49□□□□□ -1.85
VRK3-226ENST00000602029 RBX1P62877 108 aa3.49□□□□□ -1.85
VRK3-226ENST00000602029 ZNF876PQ49A33 203 aa3.49□□□□□ -1.85
VRK3-226ENST00000602029 SUMO4Q6EEV6 95 aa3.49□□□□□ -1.85
VRK3-226ENST00000602029 ZFP2Q6ZN57 461 aa3.49□□□□□ -1.85
VRK3-226ENST00000602029 Q6ZQT7 251 aa3.49□□□□□ -1.85
VRK3-226ENST00000602029 Q6ZVH6 145 aa3.49□□□□□ -1.85
VRK3-226ENST00000602029 C14orf178Q8N769 122 aaPredicted RBP3.49□□□□□ -1.85
VRK3-226ENST00000602029 Q8N814 137 aa3.49□□□□□ -1.85
VRK3-226ENST00000602029 DEFB104AQ8WTQ1 72 aa3.49□□□□□ -1.85
VRK3-226ENST00000602029 HIST1H4GQ99525 98 aa3.49□□□□□ -1.85
VRK3-226ENST00000602029 SPXQ9BT56 116 aa3.49□□□□□ -1.85
VRK3-226ENST00000602029 VCX2Q9H322 139 aa3.49□□□□□ -1.85
VRK3-226ENST00000602029 PLA2G2DQ9UNK4 145 aa3.49□□□□□ -1.85
VRK3-226ENST00000602029 SPCS1Q9Y6A9 102 aa3.49□□□□□ -1.85
VRK3-226ENST00000602029 TRBV7-3A0A075B6L6 115 aa3.48□□□□□ -1.85
VRK3-226ENST00000602029 TRBV20-1A0A075B6N2 111 aa3.48□□□□□ -1.85
VRK3-226ENST00000602029 IGKV2D-26A0A0A0MRZ7 120 aa3.48□□□□□ -1.85
VRK3-226ENST00000602029 TRAV26-2A0A0B4J265 109 aa3.48□□□□□ -1.85
VRK3-226ENST00000602029 TRAV4A0A0B4J268 109 aa3.48□□□□□ -1.85
VRK3-226ENST00000602029 H3BUT2 72 aa3.48□□□□□ -1.85
VRK3-226ENST00000602029 M0QXV9 152 aa3.48□□□□□ -1.85
VRK3-226ENST00000602029 M0R2P5 195 aa3.48□□□□□ -1.85
VRK3-226ENST00000602029 GAS8-AS1O95177 125 aa3.48□□□□□ -1.85
VRK3-226ENST00000602029 LINC01620Q4KN68 170 aa3.48□□□□□ -1.85
VRK3-226ENST00000602029 SERTAD4-AS1Q5TG53 156 aa3.48□□□□□ -1.85
VRK3-226ENST00000602029 C20orf203Q8NBC4 194 aa3.48□□□□□ -1.85
VRK3-226ENST00000602029 ATP6V0E2Q8NHE4 81 aa3.48□□□□□ -1.85
VRK3-226ENST00000602029 PPDPFQ9H3Y8 114 aa3.48□□□□□ -1.85
VRK3-226ENST00000602029 SPANXA1Q9NS26 97 aa3.48□□□□□ -1.85
VRK3-226ENST00000602029 FAM30AQ9NZY2 134 aa3.48□□□□□ -1.85
VRK3-226ENST00000602029 IGLV4-69A0A075B6H9 119 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms