RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 C2orf66Q6UXQ4 117 aa11.07□□□□□ -0.64
IRF3-230ENST00000601809 CARD19Q96LW7 228 aa11.07□□□□□ -0.64
IRF3-230ENST00000601809 NXT2Q9NPJ8 142 aaKnown RBP11.07□□□□□ -0.64
IRF3-230ENST00000601809 IGLV4-69A0A075B6H9 119 aa11.06□□□□□ -0.64
IRF3-230ENST00000601809 A0A096LNI7 61 aa11.06□□□□□ -0.64
IRF3-230ENST00000601809 IGIPA6NJ69 53 aa11.06□□□□□ -0.64
IRF3-230ENST00000601809 IFITM10A6NMD0 228 aa11.06□□□□□ -0.64
IRF3-230ENST00000601809 ORMDL2Q53FV1 153 aa11.06□□□□□ -0.64
IRF3-230ENST00000601809 AMELXQ99217 191 aa11.06□□□□□ -0.64
IRF3-230ENST00000601809 CYSLTR1Q9Y271 337 aa11.06□□□□□ -0.64
IRF3-230ENST00000601809 LINC01546A6NGU7 62 aa11.05□□□□□ -0.64
IRF3-230ENST00000601809 ZNF561-AS1K7EIQ3 104 aa11.05□□□□□ -0.64
IRF3-230ENST00000601809 S100PP25815 95 aa11.05□□□□□ -0.64
IRF3-230ENST00000601809 SYCNQ0VAF6 134 aa11.05□□□□□ -0.64
IRF3-230ENST00000601809 LINC00242Q5T6M2 205 aa11.05□□□□□ -0.64
IRF3-230ENST00000601809 Q6ZRU5 148 aa11.05□□□□□ -0.64
IRF3-230ENST00000601809 TMEM141Q96I45 108 aa11.05□□□□□ -0.64
IRF3-230ENST00000601809 C2orf48Q96LS8 159 aa11.05□□□□□ -0.64
IRF3-230ENST00000601809 ALKBH7Q9BT30 221 aaPredicted RBP11.05□□□□□ -0.64
IRF3-230ENST00000601809 DMBT1Q9UGM3 2413 aaPredicted RBP11.05□□□□□ -0.64
IRF3-230ENST00000601809 NPSP0C0P6 89 aa11.04□□□□□ -0.64
IRF3-230ENST00000601809 MALP21145 153 aa11.04□□□□□ -0.64
IRF3-230ENST00000601809 RPS10P5Q9NQ39 176 aa11.04□□□□□ -0.64
IRF3-230ENST00000601809 UBE2D1P51668 147 aa11.03□□□□□ -0.64
IRF3-230ENST00000601809 HNRNPA3P51991 378 aaKnown RBP11.03□□□□□ -0.64
IRF3-230ENST00000601809 COX19Q49B96 90 aa11.03□□□□□ -0.64
IRF3-230ENST00000601809 ZC2HC1BQ5TFG8 222 aa11.03□□□□□ -0.64
IRF3-230ENST00000601809 FAM19A3Q7Z5A8 133 aa11.03□□□□□ -0.64
IRF3-230ENST00000601809 OR10D4PQ8NGN7 298 aa11.03□□□□□ -0.64
IRF3-230ENST00000601809 RPL37AP61513 92 aaKnown RBP11.02□□□□□ -0.65
IRF3-230ENST00000601809 A0A087WZ39 114 aa11.01□□□□□ -0.65
IRF3-230ENST00000601809 IGKV2-24A0A0C4DH68 120 aa11.01□□□□□ -0.65
IRF3-230ENST00000601809 APOMO95445 188 aa11.01□□□□□ -0.65
IRF3-230ENST00000601809 MT-ND6P03923 174 aa11.01□□□□□ -0.65
IRF3-230ENST00000601809 SPAG11BQ08648 103 aa11.01□□□□□ -0.65
IRF3-230ENST00000601809 LCE2DQ5TA82 110 aaPredicted RBP11.01□□□□□ -0.65
IRF3-230ENST00000601809 TOMM6Q96B49 74 aa11.01□□□□□ -0.65
IRF3-230ENST00000601809 KIAA0087Q14695 138 aa11□□□□□ -0.65
IRF3-230ENST00000601809 MAJINQ3KP22 176 aa11□□□□□ -0.65
IRF3-230ENST00000601809 TEX43Q6ZNM6 134 aa11□□□□□ -0.65
IRF3-230ENST00000601809 TIMM17AQ99595 171 aa11□□□□□ -0.65
IRF3-230ENST00000601809 MRPL18Q9H0U6 180 aaKnown RBP11□□□□□ -0.65
IRF3-230ENST00000601809 TGIF2-C20orf24A0A0A6YYL0 155 aa10.99□□□□□ -0.65
IRF3-230ENST00000601809 KRTAP29-1A8MX34 341 aaPredicted RBP10.99□□□□□ -0.65
IRF3-230ENST00000601809 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.99□□□□□ -0.65
IRF3-230ENST00000601809 APOC3P02656 99 aa10.99□□□□□ -0.65
IRF3-230ENST00000601809 ORAOV1Q8WV07 137 aa10.99□□□□□ -0.65
IRF3-230ENST00000601809 YPEL4Q96NS1 127 aa10.99□□□□□ -0.65
IRF3-230ENST00000601809 CAMK2N2Q96S95 79 aa10.99□□□□□ -0.65
IRF3-230ENST00000601809 PTTG1IPP53801 180 aa10.98□□□□□ -0.65
IRF3-230ENST00000601809 RNF151Q2KHN1 245 aa10.98□□□□□ -0.65
IRF3-230ENST00000601809 LINC01561Q8N1V8 128 aa10.98□□□□□ -0.65
IRF3-230ENST00000601809 STPG4Q8N801 248 aa10.98□□□□□ -0.65
IRF3-230ENST00000601809 PKIGQ9Y2B9 76 aa10.98□□□□□ -0.65
IRF3-230ENST00000601809 F8WDY8 70 aa10.97□□□□□ -0.65
IRF3-230ENST00000601809 C10orf25Q5T742 122 aa10.97□□□□□ -0.65
IRF3-230ENST00000601809 MRPL35Q9NZE8 188 aaKnown RBP10.97□□□□□ -0.65
IRF3-230ENST00000601809 LINC00474Q9P2X8 69 aa10.97□□□□□ -0.65
IRF3-230ENST00000601809 LOC107984640A0A0U1RRK4 108 aa10.96□□□□□ -0.65
IRF3-230ENST00000601809 FABP9Q0Z7S8 132 aa10.96□□□□□ -0.65
IRF3-230ENST00000601809 SVBPQ8N300 66 aa10.96□□□□□ -0.65
IRF3-230ENST00000601809 URB1-AS1Q96HZ7 61 aa10.96□□□□□ -0.65
IRF3-230ENST00000601809 VCX2Q9H322 139 aa10.96□□□□□ -0.65
IRF3-230ENST00000601809 A0A0J9YXV3 536 aa10.95□□□□□ -0.66
IRF3-230ENST00000601809 SNAPINO95295 136 aa10.95□□□□□ -0.66
IRF3-230ENST00000601809 G0S2P27469 103 aa10.95□□□□□ -0.66
IRF3-230ENST00000601809 Q6ZN92 141 aa10.95□□□□□ -0.66
IRF3-230ENST00000601809 ERASQ7Z444 233 aa10.95□□□□□ -0.66
IRF3-230ENST00000601809 DPH3Q96FX2 82 aa10.95□□□□□ -0.66
IRF3-230ENST00000601809 C2orf88Q9BSF0 95 aa10.95□□□□□ -0.66
IRF3-230ENST00000601809 UNQ6190/PRO20217Q6UXQ8 127 aa10.94□□□□□ -0.66
IRF3-230ENST00000601809 A0A096LNJ9 63 aa10.93□□□□□ -0.66
IRF3-230ENST00000601809 C6orf48Q9UBA6 75 aa10.93□□□□□ -0.66
IRF3-230ENST00000601809 A0A1W2PNN7 141 aa10.92□□□□□ -0.66
IRF3-230ENST00000601809 TLX1NBP0CAT3 122 aa10.92□□□□□ -0.66
IRF3-230ENST00000601809 GAGE2BQ13066 116 aa10.92□□□□□ -0.66
IRF3-230ENST00000601809 C18orf32Q8TCD1 76 aa10.92□□□□□ -0.66
IRF3-230ENST00000601809 LINC01549A6NIU2 74 aa10.91□□□□□ -0.66
IRF3-230ENST00000601809 NDUFA1O15239 70 aa10.91□□□□□ -0.66
IRF3-230ENST00000601809 NDUFA5Q16718 116 aa10.91□□□□□ -0.66
IRF3-230ENST00000601809 PAPPA-AS1Q5QFB9 102 aa10.91□□□□□ -0.66
IRF3-230ENST00000601809 SCGB3A1Q96QR1 104 aa10.91□□□□□ -0.66
IRF3-230ENST00000601809 TRAPPC1Q9Y5R8 145 aa10.91□□□□□ -0.66
IRF3-230ENST00000601809 CDKN2A-AS1Q9UH64 79 aa10.9□□□□□ -0.66
IRF3-230ENST00000601809 OXTP01178 125 aa10.89□□□□□ -0.67
IRF3-230ENST00000601809 HERVK_113P63121 156 aa10.89□□□□□ -0.67
IRF3-230ENST00000601809 PRR3P79522 188 aaKnown RBP10.89□□□□□ -0.67
IRF3-230ENST00000601809 Q6ZRP5 223 aa10.89□□□□□ -0.67
IRF3-230ENST00000601809 FA2HQ7L5A8 372 aa10.89□□□□□ -0.67
IRF3-230ENST00000601809 C7orf33Q8WU49 177 aa10.89□□□□□ -0.67
IRF3-230ENST00000601809 IGLV5-45A0A087WSX0 123 aa10.88□□□□□ -0.67
IRF3-230ENST00000601809 SEC11AP67812 179 aa10.88□□□□□ -0.67
IRF3-230ENST00000601809 C2orf82Q6UX34 121 aa10.88□□□□□ -0.67
IRF3-230ENST00000601809 TNXBP22105 4242 aa10.88□□□□□ -0.67
IRF3-230ENST00000601809 TRBV30A0A0K0K1B3 111 aa10.87□□□□□ -0.67
IRF3-230ENST00000601809 RPL18AQ02543 176 aaKnown RBP10.87□□□□□ -0.67
IRF3-230ENST00000601809 C9orf116Q5BN46 136 aaPredicted RBP10.87□□□□□ -0.67
IRF3-230ENST00000601809 CST9LQ9H4G1 147 aa10.87□□□□□ -0.67
IRF3-230ENST00000601809 TINCRA0A1B0GVN0 87 aa10.86□□□□□ -0.67
IRF3-230ENST00000601809 KRTAP7-1Q8IUC3 87 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms