RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 BPY2O14599 106 aa2.28□□□□□ -2.04
VRK3-222ENST00000601324 TCRAP04437 139 aa2.28□□□□□ -2.04
VRK3-222ENST00000601324 FGF6P10767 208 aa2.28□□□□□ -2.04
VRK3-222ENST00000601324 TMBIM6P55061 237 aa2.28□□□□□ -2.04
VRK3-222ENST00000601324 RAB14P61106 215 aa2.28□□□□□ -2.04
VRK3-222ENST00000601324 UBE2L3P68036 154 aaKnown RBP2.28□□□□□ -2.04
VRK3-222ENST00000601324 IAH1Q2TAA2 248 aaPredicted RBP2.28□□□□□ -2.04
VRK3-222ENST00000601324 TSKUQ8WUA8 353 aa2.28□□□□□ -2.04
VRK3-222ENST00000601324 HYLS1Q96M11 299 aa2.28□□□□□ -2.04
VRK3-222ENST00000601324 SLC25A21Q9BQT8 299 aaPredicted RBP2.28□□□□□ -2.04
VRK3-222ENST00000601324 CBY1Q9Y3M2 126 aa2.28□□□□□ -2.04
VRK3-222ENST00000601324 PHLDA3Q9Y5J5 127 aa2.28□□□□□ -2.04
VRK3-222ENST00000601324 IGHV1-58A0A0C4DH39 117 aa2.27□□□□□ -2.05
VRK3-222ENST00000601324 SERTM2A0A1B0GWG4 89 aa2.27□□□□□ -2.05
VRK3-222ENST00000601324 F8W036 122 aa2.27□□□□□ -2.05
VRK3-222ENST00000601324 SMKR1H3BMG3 65 aa2.27□□□□□ -2.05
VRK3-222ENST00000601324 M0QY20 66 aa2.27□□□□□ -2.05
VRK3-222ENST00000601324 M0R381 172 aa2.27□□□□□ -2.05
VRK3-222ENST00000601324 OR7C2O60412 319 aa2.27□□□□□ -2.05
VRK3-222ENST00000601324 APOMO95445 188 aa2.27□□□□□ -2.05
VRK3-222ENST00000601324 APCSP02743 223 aa2.27□□□□□ -2.05
VRK3-222ENST00000601324 KRTAP5-9P26371 169 aa2.27□□□□□ -2.05
VRK3-222ENST00000601324 S100A4P26447 101 aaKnown RBP2.27□□□□□ -2.05
VRK3-222ENST00000601324 S100A11P31949 105 aa2.27□□□□□ -2.05
VRK3-222ENST00000601324 SULT1A1P50225 295 aa2.27□□□□□ -2.05
VRK3-222ENST00000601324 KRTAP10-10P60014 251 aa2.27□□□□□ -2.05
VRK3-222ENST00000601324 EIF5AP63241 154 aaKnown RBP2.27□□□□□ -2.05
VRK3-222ENST00000601324 BAXQ07812 192 aa2.27□□□□□ -2.05
VRK3-222ENST00000601324 FP248Q71RG6 208 aaPredicted RBP2.27□□□□□ -2.05
VRK3-222ENST00000601324 LINC00304Q8N9R0 145 aa2.27□□□□□ -2.05
VRK3-222ENST00000601324 TIMM17AQ99595 171 aa2.27□□□□□ -2.05
VRK3-222ENST00000601324 TMEM243Q9BU79 118 aa2.27□□□□□ -2.05
VRK3-222ENST00000601324 NMES1Q9C002 83 aa2.27□□□□□ -2.05
VRK3-222ENST00000601324 NAA50Q9GZZ1 169 aaKnown RBP2.27□□□□□ -2.05
VRK3-222ENST00000601324 MCUBQ9NWR8 336 aa2.27□□□□□ -2.05
VRK3-222ENST00000601324 GRIFINA4D1Z8 144 aa2.26□□□□□ -2.05
VRK3-222ENST00000601324 LINC00862A6NCI5 91 aa2.26□□□□□ -2.05
VRK3-222ENST00000601324 FABP5P3A8MUU1 101 aa2.26□□□□□ -2.05
VRK3-222ENST00000601324 B4DEV8 164 aa2.26□□□□□ -2.05
VRK3-222ENST00000601324 L7N2F9 121 aa2.26□□□□□ -2.05
VRK3-222ENST00000601324 NKX2-5P52952 324 aaPredicted RBP2.26□□□□□ -2.05
VRK3-222ENST00000601324 FLI1Q01543 452 aaPredicted RBP2.26□□□□□ -2.05
VRK3-222ENST00000601324 ATP6V1FQ16864 119 aa2.26□□□□□ -2.05
VRK3-222ENST00000601324 PRNTQ86SH4 94 aa2.26□□□□□ -2.05
VRK3-222ENST00000601324 ZFP82Q8N141 532 aa2.26□□□□□ -2.05
VRK3-222ENST00000601324 C5orf17Q8NAS9 161 aa2.26□□□□□ -2.05
VRK3-222ENST00000601324 CMTM2Q8TAZ6 248 aa2.26□□□□□ -2.05
VRK3-222ENST00000601324 WDR61Q9GZS3 305 aaKnown RBP2.26□□□□□ -2.05
VRK3-222ENST00000601324 GSKIPQ9P0R6 139 aa2.26□□□□□ -2.05
VRK3-222ENST00000601324 ESDP10768 282 aa2.25□□□□□ -2.05
VRK3-222ENST00000601324 RPL12P30050 165 aaKnown RBP2.25□□□□□ -2.05
VRK3-222ENST00000601324 SULT1A2P50226 295 aa2.25□□□□□ -2.05
VRK3-222ENST00000601324 SS18Q15532 418 aa2.25□□□□□ -2.05
VRK3-222ENST00000601324 KRTAP20-1Q3LI63 56 aa2.25□□□□□ -2.05
VRK3-222ENST00000601324 KRTAP19-6Q3LI70 58 aa2.25□□□□□ -2.05
VRK3-222ENST00000601324 KHDC3LQ587J8 217 aa2.25□□□□□ -2.05
VRK3-222ENST00000601324 SAPCD1Q5SSQ6 148 aa2.25□□□□□ -2.05
VRK3-222ENST00000601324 PP632Q6XCG6 107 aa2.25□□□□□ -2.05
VRK3-222ENST00000601324 KRTAP13-1Q8IUC0 172 aa2.25□□□□□ -2.05
VRK3-222ENST00000601324 OR10AG1Q8NH19 301 aa2.25□□□□□ -2.05
VRK3-222ENST00000601324 AP3S1Q92572 193 aa2.25□□□□□ -2.05
VRK3-222ENST00000601324 C12orf57Q99622 126 aa2.25□□□□□ -2.05
VRK3-222ENST00000601324 EPDR1Q9UM22 224 aa2.25□□□□□ -2.05
VRK3-222ENST00000601324 FLVCR2Q9UPI3 526 aa2.25□□□□□ -2.05
VRK3-222ENST00000601324 ARL2-SNX15V9GYD0 113 aa2.25□□□□□ -2.05
VRK3-222ENST00000601324 KMT2DO14686 5537 aa2.24□□□□□ -2.05
VRK3-222ENST00000601324 LINC00959A0A1B0GUT2 108 aa2.24□□□□□ -2.05
VRK3-222ENST00000601324 M0R036 132 aa2.24□□□□□ -2.05
VRK3-222ENST00000601324 CCL25O15444 150 aa2.24□□□□□ -2.05
VRK3-222ENST00000601324 SH2D1AO60880 128 aa2.24□□□□□ -2.05
VRK3-222ENST00000601324 UPK1BO75841 260 aa2.24□□□□□ -2.05
VRK3-222ENST00000601324 NDUFB6O95139 128 aa2.24□□□□□ -2.05
VRK3-222ENST00000601324 IL7P13232 177 aa2.24□□□□□ -2.05
VRK3-222ENST00000601324 TPT1P13693 172 aaKnown RBP2.24□□□□□ -2.05
VRK3-222ENST00000601324 S100PP25815 95 aa2.24□□□□□ -2.05
VRK3-222ENST00000601324 DEFA1P59665 94 aa2.24□□□□□ -2.05
VRK3-222ENST00000601324 DEFA3P59666 94 aa2.24□□□□□ -2.05
VRK3-222ENST00000601324 HBG1P69891 147 aa2.24□□□□□ -2.05
VRK3-222ENST00000601324 HBG2P69892 147 aa2.24□□□□□ -2.05
VRK3-222ENST00000601324 IFITM3Q01628 133 aa2.24□□□□□ -2.05
VRK3-222ENST00000601324 ZNF56Q15929 161 aa2.24□□□□□ -2.05
VRK3-222ENST00000601324 FAM229BQ4G0N7 80 aa2.24□□□□□ -2.05
VRK3-222ENST00000601324 FAM74A1Q5RGS3 127 aa2.24□□□□□ -2.05
VRK3-222ENST00000601324 MRPL55Q7Z7F7 128 aaKnown RBP2.24□□□□□ -2.05
VRK3-222ENST00000601324 OR5A1Q8NGJ0 315 aa2.24□□□□□ -2.05
VRK3-222ENST00000601324 MCFD2Q8NI22 146 aa2.24□□□□□ -2.05
VRK3-222ENST00000601324 SEC22CQ9BRL7 303 aa2.24□□□□□ -2.05
VRK3-222ENST00000601324 IGKV3OR2-268A0A0C4DH90 116 aa2.23□□□□□ -2.05
VRK3-222ENST00000601324 RAB19A4D1S5 217 aa2.23□□□□□ -2.05
VRK3-222ENST00000601324 C19orf71A6NCJ1 209 aa2.23□□□□□ -2.05
VRK3-222ENST00000601324 RGS5O15539 181 aa2.23□□□□□ -2.05
VRK3-222ENST00000601324 S100A9P06702 114 aaKnown RBP2.23□□□□□ -2.05
VRK3-222ENST00000601324 CXCL1P09341 107 aa2.23□□□□□ -2.05
VRK3-222ENST00000601324 OR5AL1P0C617 328 aa2.23□□□□□ -2.05
VRK3-222ENST00000601324 XCL1P47992 114 aa2.23□□□□□ -2.05
VRK3-222ENST00000601324 TAS2R45P59539 299 aa2.23□□□□□ -2.05
VRK3-222ENST00000601324 COTL1Q14019 142 aa2.23□□□□□ -2.05
VRK3-222ENST00000601324 IL18Q14116 193 aa2.23□□□□□ -2.05
VRK3-222ENST00000601324 SLC25A34Q6PIV7 304 aa2.23□□□□□ -2.05
VRK3-222ENST00000601324 FAM19A5Q7Z5A7 132 aaPredicted RBP2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms