RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 C1orf137Q5JT78 98 aa10.95□□□□□ -0.66
CHMP2A-208ENST00000601220 C10orf25Q5T742 122 aa10.95□□□□□ -0.66
CHMP2A-208ENST00000601220 hCG_2014768A0A024R1R8 64 aa10.94□□□□□ -0.66
CHMP2A-208ENST00000601220 F8WDY8 70 aa10.94□□□□□ -0.66
CHMP2A-208ENST00000601220 CKS2P33552 79 aa10.94□□□□□ -0.66
CHMP2A-208ENST00000601220 MRPS36P82909 103 aaKnown RBP10.94□□□□□ -0.66
CHMP2A-208ENST00000601220 ORAOV1Q8WV07 137 aa10.94□□□□□ -0.66
CHMP2A-208ENST00000601220 A0A1B0GW15 77 aa10.93□□□□□ -0.66
CHMP2A-208ENST00000601220 FAM168BA1KXE4 195 aa10.93□□□□□ -0.66
CHMP2A-208ENST00000601220 TLX1NBP0CAT3 122 aa10.93□□□□□ -0.66
CHMP2A-208ENST00000601220 ADIRFQ15847 76 aa10.93□□□□□ -0.66
CHMP2A-208ENST00000601220 KRTAP7-1Q8IUC3 87 aa10.93□□□□□ -0.66
CHMP2A-208ENST00000601220 SMIM2Q9BVW6 85 aa10.93□□□□□ -0.66
CHMP2A-208ENST00000601220 SPANXA1Q9NS26 97 aa10.93□□□□□ -0.66
CHMP2A-208ENST00000601220 TCAPO15273 167 aa10.92□□□□□ -0.66
CHMP2A-208ENST00000601220 IGLV7-43P04211 117 aa10.92□□□□□ -0.66
CHMP2A-208ENST00000601220 SRSF3P84103 164 aaKnown RBP10.92□□□□□ -0.66
CHMP2A-208ENST00000601220 UNQ6190/PRO20217Q6UXQ8 127 aa10.92□□□□□ -0.66
CHMP2A-208ENST00000601220 NAT8Q9UHE5 227 aa10.92□□□□□ -0.66
CHMP2A-208ENST00000601220 A0A1B0GXF2 115 aa10.91□□□□□ -0.66
CHMP2A-208ENST00000601220 D6R8Y8 96 aa10.91□□□□□ -0.66
CHMP2A-208ENST00000601220 KIAA0087Q14695 138 aa10.91□□□□□ -0.66
CHMP2A-208ENST00000601220 IMMP2LQ96T52 175 aa10.91□□□□□ -0.66
CHMP2A-208ENST00000601220 C6orf48Q9UBA6 75 aa10.91□□□□□ -0.66
CHMP2A-208ENST00000601220 NDUFA1O15239 70 aa10.9□□□□□ -0.66
CHMP2A-208ENST00000601220 NPYP01303 97 aa10.9□□□□□ -0.66
CHMP2A-208ENST00000601220 HBBP68871 147 aa10.89□□□□□ -0.67
CHMP2A-208ENST00000601220 PRR26Q8N8Z3 221 aa10.89□□□□□ -0.67
CHMP2A-208ENST00000601220 MRPL54Q6P161 138 aaKnown RBP10.88□□□□□ -0.67
CHMP2A-208ENST00000601220 DIRC1Q969H9 104 aa10.88□□□□□ -0.67
CHMP2A-208ENST00000601220 A0A087WZ39 114 aa10.87□□□□□ -0.67
CHMP2A-208ENST00000601220 IFITM10A6NMD0 228 aa10.87□□□□□ -0.67
CHMP2A-208ENST00000601220 SMDT1Q9H4I9 107 aa10.87□□□□□ -0.67
CHMP2A-208ENST00000601220 H0Y9J4 135 aa10.86□□□□□ -0.67
CHMP2A-208ENST00000601220 KRTAP1-4P0C5Y4 121 aa10.86□□□□□ -0.67
CHMP2A-208ENST00000601220 LINC00242Q5T6M2 205 aa10.86□□□□□ -0.67
CHMP2A-208ENST00000601220 PYGO1Q9Y3Y4 419 aa10.86□□□□□ -0.67
CHMP2A-208ENST00000601220 F8W036 122 aa10.85□□□□□ -0.67
CHMP2A-208ENST00000601220 PPBPP02775 128 aa10.85□□□□□ -0.67
CHMP2A-208ENST00000601220 GAGE2EQ4V326 116 aa10.85□□□□□ -0.67
CHMP2A-208ENST00000601220 FAM19A5Q7Z5A7 132 aaPredicted RBP10.85□□□□□ -0.67
CHMP2A-208ENST00000601220 GAGE2DQ9UEU5 116 aa10.85□□□□□ -0.67
CHMP2A-208ENST00000601220 IGLV4-3A0A075B6K6 122 aa10.84□□□□□ -0.67
CHMP2A-208ENST00000601220 S100A8P05109 93 aa10.84□□□□□ -0.67
CHMP2A-208ENST00000601220 PEA15Q15121 130 aa10.84□□□□□ -0.67
CHMP2A-208ENST00000601220 PRSS47A8MTI9 375 aa10.83□□□□□ -0.68
CHMP2A-208ENST00000601220 TGIF2-C20orf24A0A0A6YYL0 155 aa10.82□□□□□ -0.68
CHMP2A-208ENST00000601220 C9orf129Q5T035 196 aaKnown RBP10.82□□□□□ -0.68
CHMP2A-208ENST00000601220 C2orf82Q6UX34 121 aa10.82□□□□□ -0.68
CHMP2A-208ENST00000601220 TMEM136Q6ZRR5 245 aa10.82□□□□□ -0.68
CHMP2A-208ENST00000601220 ORMDL3Q8N138 153 aa10.82□□□□□ -0.68
CHMP2A-208ENST00000601220 TRBV30A0A0K0K1B3 111 aa10.81□□□□□ -0.68
CHMP2A-208ENST00000601220 IFI27P40305 119 aaPredicted RBP10.81□□□□□ -0.68
CHMP2A-208ENST00000601220 PRELID3AQ96N28 172 aa10.81□□□□□ -0.68
CHMP2A-208ENST00000601220 IGLV1-50A0A075B6I6 118 aa10.8□□□□□ -0.68
CHMP2A-208ENST00000601220 NDUFC2-KCTD14E9PQ53 114 aa10.8□□□□□ -0.68
CHMP2A-208ENST00000601220 M0QXV9 152 aa10.8□□□□□ -0.68
CHMP2A-208ENST00000601220 RAB5AP20339 215 aa10.8□□□□□ -0.68
CHMP2A-208ENST00000601220 UBE2D1P51668 147 aa10.8□□□□□ -0.68
CHMP2A-208ENST00000601220 LINC01561Q8N1V8 128 aa10.8□□□□□ -0.68
CHMP2A-208ENST00000601220 TMEM141Q96I45 108 aa10.8□□□□□ -0.68
CHMP2A-208ENST00000601220 A0A1B0GVG6 124 aa10.79□□□□□ -0.68
CHMP2A-208ENST00000601220 ATP5L2Q7Z4Y8 100 aa10.79□□□□□ -0.68
CHMP2A-208ENST00000601220 ZC2HC1BQ5TFG8 222 aa10.78□□□□□ -0.68
CHMP2A-208ENST00000601220 LINC00173Q6ZV60 143 aa10.78□□□□□ -0.68
CHMP2A-208ENST00000601220 AMELXQ99217 191 aa10.77□□□□□ -0.69
CHMP2A-208ENST00000601220 UBE2BP63146 152 aa10.76□□□□□ -0.69
CHMP2A-208ENST00000601220 LOC389332A0A1B0GUA5 103 aa10.75□□□□□ -0.69
CHMP2A-208ENST00000601220 TEX43Q6ZNM6 134 aa10.75□□□□□ -0.69
CHMP2A-208ENST00000601220 FAM19A3Q7Z5A8 133 aa10.75□□□□□ -0.69
CHMP2A-208ENST00000601220 LAMTOR2Q9Y2Q5 125 aa10.75□□□□□ -0.69
CHMP2A-208ENST00000601220 MUC2Q02817 5179 aa10.74□□□□□ -0.69
CHMP2A-208ENST00000601220 C2orf66Q6UXQ4 117 aa10.74□□□□□ -0.69
CHMP2A-208ENST00000601220 Q8N8P6 123 aa10.74□□□□□ -0.69
CHMP2A-208ENST00000601220 PACRGQ96M98 296 aaPredicted RBP10.74□□□□□ -0.69
CHMP2A-208ENST00000601220 IGIPA6NJ69 53 aa10.73□□□□□ -0.69
CHMP2A-208ENST00000601220 ZNF861PO60384 105 aa10.72□□□□□ -0.69
CHMP2A-208ENST00000601220 MAP1LC3AQ9H492 121 aa10.72□□□□□ -0.69
CHMP2A-208ENST00000601220 CYSLTR1Q9Y271 337 aa10.72□□□□□ -0.69
CHMP2A-208ENST00000601220 CARHSP1Q9Y2V2 147 aaKnown RBP10.72□□□□□ -0.69
CHMP2A-208ENST00000601220 NPSP0C0P6 89 aa10.71□□□□□ -0.69
CHMP2A-208ENST00000601220 Q6ZN92 141 aa10.71□□□□□ -0.69
CHMP2A-208ENST00000601220 C2orf88Q9BSF0 95 aa10.71□□□□□ -0.69
CHMP2A-208ENST00000601220 VCX2Q9H322 139 aa10.71□□□□□ -0.69
CHMP2A-208ENST00000601220 C22orf24Q9Y442 160 aa10.71□□□□□ -0.69
CHMP2A-208ENST00000601220 Q8IZM0 81 aa10.7□□□□□ -0.7
CHMP2A-208ENST00000601220 LINC00469Q8N7U9 141 aa10.7□□□□□ -0.7
CHMP2A-208ENST00000601220 RPL13AP40429 203 aaKnown RBP10.69□□□□□ -0.7
CHMP2A-208ENST00000601220 ORMDL2Q53FV1 153 aa10.68□□□□□ -0.7
CHMP2A-208ENST00000601220 C6orf226Q5I0X4 101 aa10.68□□□□□ -0.7
CHMP2A-208ENST00000601220 XAGE1AQ9HD64 81 aa10.68□□□□□ -0.7
CHMP2A-208ENST00000601220 TOMM7Q9P0U1 55 aa10.68□□□□□ -0.7
CHMP2A-208ENST00000601220 K7EMI3 77 aa10.67□□□□□ -0.7
CHMP2A-208ENST00000601220 PRSS2P07478 247 aa10.67□□□□□ -0.7
CHMP2A-208ENST00000601220 CKS1BP61024 79 aa10.67□□□□□ -0.7
CHMP2A-208ENST00000601220 CDKN2A-AS1Q9UH64 79 aa10.67□□□□□ -0.7
CHMP2A-208ENST00000601220 NUPR1O60356 82 aa10.66□□□□□ -0.7
CHMP2A-208ENST00000601220 PRR4Q16378 134 aa10.66□□□□□ -0.7
CHMP2A-208ENST00000601220 ANAPC16Q96DE5 110 aa10.66□□□□□ -0.7
CHMP2A-208ENST00000601220 ALKBH7Q9BT30 221 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms