RNA–Protein interactions for RNA: ENST00000600648.1

FARP1-231, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-231	ENST00000600648	FAM104A	Q969W3	186 aa		13.36	□□□□□ -0.27
FARP1-231	ENST00000600648		A0A1B0GXF2	115 aa		13.35	□□□□□ -0.27
FARP1-231	ENST00000600648	S100A8	P05109	93 aa		13.35	□□□□□ -0.27
FARP1-231	ENST00000600648	C9orf116	Q5BN46	136 aa	Predicted RBP	13.34	□□□□□ -0.27
FARP1-231	ENST00000600648	REG3G	Q6UW15	175 aa		13.34	□□□□□ -0.27
FARP1-231	ENST00000600648	ORAOV1	Q8WV07	137 aa		13.34	□□□□□ -0.27
FARP1-231	ENST00000600648	SPANXA1	Q9NS26	97 aa		13.34	□□□□□ -0.27
FARP1-231	ENST00000600648	LRP2	P98164	4655 aa		13.34	□□□□□ -0.27
FARP1-231	ENST00000600648	SRSF9	Q13242	221 aa	Known RBP eCLIP	13.33	□□□□□ -0.28
FARP1-231	ENST00000600648	SMDT1	Q9H4I9	107 aa		13.33	□□□□□ -0.28
FARP1-231	ENST00000600648	IFITM10	A6NMD0	228 aa		13.32	□□□□□ -0.28
FARP1-231	ENST00000600648	OR10D4P	Q8NGN7	298 aa		13.31	□□□□□ -0.28
FARP1-231	ENST00000600648	IGHV3OR16-9	A0A0B4J2B5	98 aa		13.3	□□□□□ -0.28
FARP1-231	ENST00000600648	PPBP	P02775	128 aa		13.3	□□□□□ -0.28
FARP1-231	ENST00000600648	MRPS36	P82909	103 aa	Known RBP	13.3	□□□□□ -0.28
FARP1-231	ENST00000600648	PHF5A	Q7RTV0	110 aa	Known RBP	13.3	□□□□□ -0.28
FARP1-231	ENST00000600648	ORMDL3	Q8N138	153 aa		13.3	□□□□□ -0.28
FARP1-231	ENST00000600648	MT-ND6	P03923	174 aa		13.29	□□□□□ -0.28
FARP1-231	ENST00000600648	TMEM136	Q6ZRR5	245 aa		13.29	□□□□□ -0.28
FARP1-231	ENST00000600648	PRELID3A	Q96N28	172 aa		13.29	□□□□□ -0.28
FARP1-231	ENST00000600648	PSORS1C2	Q9UIG4	136 aa		13.29	□□□□□ -0.28
FARP1-231	ENST00000600648	RAB5A	P20339	215 aa		13.28	□□□□□ -0.28
FARP1-231	ENST00000600648	KRTAP10-8	P60410	259 aa		13.28	□□□□□ -0.28
FARP1-231	ENST00000600648	RNF151	Q2KHN1	245 aa		13.28	□□□□□ -0.28
FARP1-231	ENST00000600648	C10orf25	Q5T742	122 aa		13.28	□□□□□ -0.28
FARP1-231	ENST00000600648	MRPL35	Q9NZE8	188 aa	Known RBP	13.27	□□□□□ -0.29
FARP1-231	ENST00000600648	LOC389332	A0A1B0GUA5	103 aa		13.26	□□□□□ -0.29
FARP1-231	ENST00000600648	NDUFA1	O15239	70 aa		13.26	□□□□□ -0.29
FARP1-231	ENST00000600648	IFI27	P40305	119 aa	Predicted RBP	13.26	□□□□□ -0.29
FARP1-231	ENST00000600648	UNQ6190/PRO20217	Q6UXQ8	127 aa		13.26	□□□□□ -0.29
FARP1-231	ENST00000600648	ATP5L2	Q7Z4Y8	100 aa		13.26	□□□□□ -0.29
FARP1-231	ENST00000600648	TGIF2-C20orf24	A0A0A6YYL0	155 aa		13.25	□□□□□ -0.29
FARP1-231	ENST00000600648	C1orf137	Q5JT78	98 aa		13.25	□□□□□ -0.29
FARP1-231	ENST00000600648	IMMP2L	Q96T52	175 aa		13.25	□□□□□ -0.29
FARP1-231	ENST00000600648	FAM168B	A1KXE4	195 aa		13.24	□□□□□ -0.29
FARP1-231	ENST00000600648	C6orf48	Q9UBA6	75 aa		13.24	□□□□□ -0.29
FARP1-231	ENST00000600648	IGLV4-3	A0A075B6K6	122 aa		13.23	□□□□□ -0.29
FARP1-231	ENST00000600648	GAGE2E	Q4V326	116 aa		13.23	□□□□□ -0.29
FARP1-231	ENST00000600648	GAGE2D	Q9UEU5	116 aa		13.23	□□□□□ -0.29
FARP1-231	ENST00000600648		F8WDY8	70 aa		13.22	□□□□□ -0.29
FARP1-231	ENST00000600648	LINC00242	Q5T6M2	205 aa		13.21	□□□□□ -0.29
FARP1-231	ENST00000600648	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	13.21	□□□□□ -0.29
FARP1-231	ENST00000600648	TMEM141	Q96I45	108 aa		13.21	□□□□□ -0.29
FARP1-231	ENST00000600648	MAP1LC3A	Q9H492	121 aa		13.21	□□□□□ -0.29
FARP1-231	ENST00000600648	PYGO1	Q9Y3Y4	419 aa		13.21	□□□□□ -0.29
FARP1-231	ENST00000600648		A0A087WZ39	114 aa		13.2	□□□□□ -0.3
FARP1-231	ENST00000600648	ZC2HC1B	Q5TFG8	222 aa		13.2	□□□□□ -0.3
FARP1-231	ENST00000600648	KIAA0087	Q14695	138 aa		13.19	□□□□□ -0.3
FARP1-231	ENST00000600648	TLX1NB	P0CAT3	122 aa		13.18	□□□□□ -0.3
FARP1-231	ENST00000600648	C2orf82	Q6UX34	121 aa		13.18	□□□□□ -0.3
FARP1-231	ENST00000600648	TEX43	Q6ZNM6	134 aa		13.18	□□□□□ -0.3
FARP1-231	ENST00000600648	KRTAP11-1	Q8IUC1	163 aa		13.18	□□□□□ -0.3
FARP1-231	ENST00000600648	LAMTOR2	Q9Y2Q5	125 aa		13.17	□□□□□ -0.3
FARP1-231	ENST00000600648	PRSS47	A8MTI9	375 aa		13.16	□□□□□ -0.3
FARP1-231	ENST00000600648	MT-ND4L	P03901	98 aa		13.16	□□□□□ -0.3
FARP1-231	ENST00000600648	UBE2D1	P51668	147 aa		13.16	□□□□□ -0.3
FARP1-231	ENST00000600648	C2orf66	Q6UXQ4	117 aa		13.16	□□□□□ -0.3
FARP1-231	ENST00000600648		Q8N8P6	123 aa		13.16	□□□□□ -0.3
FARP1-231	ENST00000600648	CYSLTR1	Q9Y271	337 aa		13.16	□□□□□ -0.3
FARP1-231	ENST00000600648	IGLV7-43	P04211	117 aa		13.15	□□□□□ -0.3
FARP1-231	ENST00000600648	PNRC1	Q12796	327 aa	Predicted RBP	13.15	□□□□□ -0.3
FARP1-231	ENST00000600648	ANAPC16	Q96DE5	110 aa		13.15	□□□□□ -0.3
FARP1-231	ENST00000600648	C2orf88	Q9BSF0	95 aa		13.15	□□□□□ -0.3
FARP1-231	ENST00000600648	RNF213	Q63HN8	5207 aa		13.14	□□□□□ -0.31
FARP1-231	ENST00000600648		Q6ZN92	141 aa		13.14	□□□□□ -0.31
FARP1-231	ENST00000600648	LINC00173	Q6ZV60	143 aa		13.13	□□□□□ -0.31
FARP1-231	ENST00000600648	KRTAP7-1	Q8IUC3	87 aa		13.13	□□□□□ -0.31
FARP1-231	ENST00000600648	PACRG	Q96M98	296 aa	Predicted RBP	13.13	□□□□□ -0.31
FARP1-231	ENST00000600648	VCX2	Q9H322	139 aa		13.13	□□□□□ -0.31
FARP1-231	ENST00000600648	TRBV30	A0A0K0K1B3	111 aa		13.12	□□□□□ -0.31
FARP1-231	ENST00000600648	RAB14	P61106	215 aa		13.12	□□□□□ -0.31
FARP1-231	ENST00000600648	DIRC1	Q969H9	104 aa		13.12	□□□□□ -0.31
FARP1-231	ENST00000600648	TOMM7	Q9P0U1	55 aa		13.12	□□□□□ -0.31
FARP1-231	ENST00000600648		M0QXV9	152 aa		13.11	□□□□□ -0.31
FARP1-231	ENST00000600648	UBE2B	P63146	152 aa		13.11	□□□□□ -0.31
FARP1-231	ENST00000600648	ORMDL2	Q53FV1	153 aa		13.11	□□□□□ -0.31
FARP1-231	ENST00000600648	NDUFC2-KCTD14	E9PQ53	114 aa		13.1	□□□□□ -0.31
FARP1-231	ENST00000600648	PRR26	Q8N8Z3	221 aa		13.1	□□□□□ -0.31
FARP1-231	ENST00000600648	AMELX	Q99217	191 aa		13.1	□□□□□ -0.31
FARP1-231	ENST00000600648	PRSS2	P07478	247 aa		13.09	□□□□□ -0.31
FARP1-231	ENST00000600648	C9orf129	Q5T035	196 aa	Known RBP	13.09	□□□□□ -0.31
FARP1-231	ENST00000600648	CTDSP1	Q9GZU7	261 aa		13.09	□□□□□ -0.31
FARP1-231	ENST00000600648	IGIP	A6NJ69	53 aa		13.08	□□□□□ -0.32
FARP1-231	ENST00000600648	LINC01561	Q8N1V8	128 aa		13.08	□□□□□ -0.32
FARP1-231	ENST00000600648		H0Y9J4	135 aa		13.07	□□□□□ -0.32
FARP1-231	ENST00000600648	CKS1B	P61024	79 aa		13.06	□□□□□ -0.32
FARP1-231	ENST00000600648	KIAA1644	Q3SXP7	199 aa		13.06	□□□□□ -0.32
FARP1-231	ENST00000600648	C6orf226	Q5I0X4	101 aa		13.06	□□□□□ -0.32
FARP1-231	ENST00000600648	LINC00469	Q8N7U9	141 aa		13.06	□□□□□ -0.32
FARP1-231	ENST00000600648	NXT2	Q9NPJ8	142 aa	Known RBP	13.06	□□□□□ -0.32
FARP1-231	ENST00000600648	ALKBH7	Q9BT30	221 aa	Predicted RBP	13.05	□□□□□ -0.32
FARP1-231	ENST00000600648	LPA	P08519	4548 aa		13.04	□□□□□ -0.32
FARP1-231	ENST00000600648		K7EMI3	77 aa		13.03	□□□□□ -0.32
FARP1-231	ENST00000600648	CDKN2A-AS1	Q9UH64	79 aa		13.03	□□□□□ -0.32
FARP1-231	ENST00000600648	NPS	P0C0P6	89 aa		13.02	□□□□□ -0.33
FARP1-231	ENST00000600648	GEMIN7	Q9H840	131 aa	Known RBP	13.02	□□□□□ -0.33
FARP1-231	ENST00000600648	XAGE1A	Q9HD64	81 aa		13.02	□□□□□ -0.33
FARP1-231	ENST00000600648	HERVK_113	P63121	156 aa		13.01	□□□□□ -0.33
FARP1-231	ENST00000600648	FAM19A3	Q7Z5A8	133 aa		13.01	□□□□□ -0.33
FARP1-231	ENST00000600648		Q8IZM0	81 aa		13.01	□□□□□ -0.33

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