RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 RAB5AP20339 215 aa9.86□□□□□ -0.83
VRK3-221ENST00000600284 PNRC1Q12796 327 aaPredicted RBP9.86□□□□□ -0.83
VRK3-221ENST00000600284 RNF151Q2KHN1 245 aa9.86□□□□□ -0.83
VRK3-221ENST00000600284 IGHV3OR16-9A0A0B4J2B5 98 aa9.85□□□□□ -0.83
VRK3-221ENST00000600284 GAGE2BQ13066 116 aa9.85□□□□□ -0.83
VRK3-221ENST00000600284 ANAPC16Q96DE5 110 aa9.85□□□□□ -0.83
VRK3-221ENST00000600284 PRELID3AQ96N28 172 aa9.85□□□□□ -0.83
VRK3-221ENST00000600284 LAMTOR2Q9Y2Q5 125 aa9.85□□□□□ -0.83
VRK3-221ENST00000600284 PYGO1Q9Y3Y4 419 aa9.85□□□□□ -0.83
VRK3-221ENST00000600284 SPAG11BQ08648 103 aa9.84□□□□□ -0.83
VRK3-221ENST00000600284 SPINK6Q6UWN8 80 aa9.84□□□□□ -0.83
VRK3-221ENST00000600284 Q6ZRP5 223 aa9.84□□□□□ -0.83
VRK3-221ENST00000600284 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.83□□□□□ -0.84
VRK3-221ENST00000600284 MT-ND4LP03901 98 aa9.83□□□□□ -0.84
VRK3-221ENST00000600284 IFI27P40305 119 aaPredicted RBP9.83□□□□□ -0.84
VRK3-221ENST00000600284 RAB14P61106 215 aa9.83□□□□□ -0.84
VRK3-221ENST00000600284 LINC01600Q96MT4 127 aa9.83□□□□□ -0.84
VRK3-221ENST00000600284 OPRPNQ99935 248 aaPredicted RBP9.83□□□□□ -0.84
VRK3-221ENST00000600284 MRPL35Q9NZE8 188 aaKnown RBP9.83□□□□□ -0.84
VRK3-221ENST00000600284 IFITM10A6NMD0 228 aa9.82□□□□□ -0.84
VRK3-221ENST00000600284 ORAOV1Q8WV07 137 aa9.82□□□□□ -0.84
VRK3-221ENST00000600284 SRSF9Q13242 221 aaKnown RBP eCLIP9.81□□□□□ -0.84
VRK3-221ENST00000600284 IMMP2LQ96T52 175 aa9.81□□□□□ -0.84
VRK3-221ENST00000600284 A0A1W2PNN7 141 aa9.8□□□□□ -0.84
VRK3-221ENST00000600284 NDUFA1O15239 70 aa9.8□□□□□ -0.84
VRK3-221ENST00000600284 RPL18AQ02543 176 aaKnown RBP9.8□□□□□ -0.84
VRK3-221ENST00000600284 C9orf116Q5BN46 136 aaPredicted RBP9.8□□□□□ -0.84
VRK3-221ENST00000600284 REG3GQ6UW15 175 aa9.8□□□□□ -0.84
VRK3-221ENST00000600284 TGIF2-C20orf24A0A0A6YYL0 155 aa9.79□□□□□ -0.84
VRK3-221ENST00000600284 TMEM141Q96I45 108 aa9.79□□□□□ -0.84
VRK3-221ENST00000600284 MAP1LC3AQ9H492 121 aa9.79□□□□□ -0.84
VRK3-221ENST00000600284 TNXBP22105 4242 aa9.79□□□□□ -0.84
VRK3-221ENST00000600284 IGLV4-3A0A075B6K6 122 aa9.78□□□□□ -0.84
VRK3-221ENST00000600284 A0A087WZ39 114 aa9.78□□□□□ -0.84
VRK3-221ENST00000600284 K7EMI3 77 aa9.78□□□□□ -0.84
VRK3-221ENST00000600284 TLX1NBP0CAT3 122 aa9.78□□□□□ -0.84
VRK3-221ENST00000600284 Q8N8P6 123 aa9.78□□□□□ -0.84
VRK3-221ENST00000600284 A0A0J9YXV3 536 aa9.77□□□□□ -0.85
VRK3-221ENST00000600284 LOC389332A0A1B0GUA5 103 aa9.77□□□□□ -0.85
VRK3-221ENST00000600284 NPSP0C0P6 89 aa9.77□□□□□ -0.85
VRK3-221ENST00000600284 LINC00242Q5T6M2 205 aa9.77□□□□□ -0.85
VRK3-221ENST00000600284 CYSLTR1Q9Y271 337 aa9.77□□□□□ -0.85
VRK3-221ENST00000600284 UBR4Q5T4S7 5183 aa9.77□□□□□ -0.85
VRK3-221ENST00000600284 ORMDL2Q53FV1 153 aa9.76□□□□□ -0.85
VRK3-221ENST00000600284 TEX43Q6ZNM6 134 aa9.76□□□□□ -0.85
VRK3-221ENST00000600284 LINC01561Q8N1V8 128 aa9.76□□□□□ -0.85
VRK3-221ENST00000600284 KIAA0087Q14695 138 aa9.75□□□□□ -0.85
VRK3-221ENST00000600284 CLLU1Q5K131 121 aa9.75□□□□□ -0.85
VRK3-221ENST00000600284 C2orf66Q6UXQ4 117 aa9.75□□□□□ -0.85
VRK3-221ENST00000600284 UNQ6190/PRO20217Q6UXQ8 127 aa9.75□□□□□ -0.85
VRK3-221ENST00000600284 UBE2D1P51668 147 aa9.74□□□□□ -0.85
VRK3-221ENST00000600284 KRTAP10-8P60410 259 aa9.74□□□□□ -0.85
VRK3-221ENST00000600284 C10orf25Q5T742 122 aa9.74□□□□□ -0.85
VRK3-221ENST00000600284 Q6ZN92 141 aa9.74□□□□□ -0.85
VRK3-221ENST00000600284 C2orf88Q9BSF0 95 aa9.74□□□□□ -0.85
VRK3-221ENST00000600284 NXT2Q9NPJ8 142 aaKnown RBP9.74□□□□□ -0.85
VRK3-221ENST00000600284 C6orf48Q9UBA6 75 aa9.74□□□□□ -0.85
VRK3-221ENST00000600284 PSORS1C2Q9UIG4 136 aa9.74□□□□□ -0.85
VRK3-221ENST00000600284 TRBV30A0A0K0K1B3 111 aa9.73□□□□□ -0.85
VRK3-221ENST00000600284 MT-ND6P03923 174 aa9.73□□□□□ -0.85
VRK3-221ENST00000600284 G0S2P27469 103 aa9.73□□□□□ -0.85
VRK3-221ENST00000600284 AMELXQ99217 191 aa9.73□□□□□ -0.85
VRK3-221ENST00000600284 VCX2Q9H322 139 aa9.73□□□□□ -0.85
VRK3-221ENST00000600284 PHF5AQ7RTV0 110 aaKnown RBP9.72□□□□□ -0.85
VRK3-221ENST00000600284 FAM19A3Q7Z5A8 133 aa9.72□□□□□ -0.85
VRK3-221ENST00000600284 CTDSP1Q9GZU7 261 aa9.72□□□□□ -0.85
VRK3-221ENST00000600284 IGIPA6NJ69 53 aa9.71□□□□□ -0.86
VRK3-221ENST00000600284 PAPPA-AS1Q5QFB9 102 aa9.71□□□□□ -0.86
VRK3-221ENST00000600284 UQCC3Q6UW78 93 aa9.71□□□□□ -0.86
VRK3-221ENST00000600284 LINC00173Q6ZV60 143 aa9.7□□□□□ -0.86
VRK3-221ENST00000600284 TRAV9-1A0A075B6T8 112 aa9.69□□□□□ -0.86
VRK3-221ENST00000600284 SEC11AP67812 179 aa9.69□□□□□ -0.86
VRK3-221ENST00000600284 C1orf137Q5JT78 98 aa9.69□□□□□ -0.86
VRK3-221ENST00000600284 PACRGQ96M98 296 aaPredicted RBP9.69□□□□□ -0.86
VRK3-221ENST00000600284 NDUFC2-KCTD14E9PQ53 114 aa9.68□□□□□ -0.86
VRK3-221ENST00000600284 GAGE2EQ4V326 116 aa9.68□□□□□ -0.86
VRK3-221ENST00000600284 TIMM17AQ99595 171 aa9.68□□□□□ -0.86
VRK3-221ENST00000600284 GAGE2DQ9UEU5 116 aa9.68□□□□□ -0.86
VRK3-221ENST00000600284 FAM168BA1KXE4 195 aa9.67□□□□□ -0.86
VRK3-221ENST00000600284 TMEM218A2RU14 115 aa9.67□□□□□ -0.86
VRK3-221ENST00000600284 HERVK_113P63121 156 aa9.67□□□□□ -0.86
VRK3-221ENST00000600284 ZC2HC1BQ5TFG8 222 aa9.67□□□□□ -0.86
VRK3-221ENST00000600284 C2orf82Q6UX34 121 aa9.67□□□□□ -0.86
VRK3-221ENST00000600284 TOMM6Q96B49 74 aa9.67□□□□□ -0.86
VRK3-221ENST00000600284 IGLV7-43P04211 117 aa9.66□□□□□ -0.86
VRK3-221ENST00000600284 PRSS2P07478 247 aa9.66□□□□□ -0.86
VRK3-221ENST00000600284 ADCYAP1P18509 176 aa9.66□□□□□ -0.86
VRK3-221ENST00000600284 FAM19A5Q7Z5A7 132 aaPredicted RBP9.66□□□□□ -0.86
VRK3-221ENST00000600284 Q8IZM0 81 aa9.66□□□□□ -0.86
VRK3-221ENST00000600284 LINC01549A6NIU2 74 aa9.65□□□□□ -0.86
VRK3-221ENST00000600284 CKS1BP61024 79 aa9.65□□□□□ -0.86
VRK3-221ENST00000600284 C6orf226Q5I0X4 101 aa9.65□□□□□ -0.86
VRK3-221ENST00000600284 DIRC1Q969H9 104 aa9.65□□□□□ -0.86
VRK3-221ENST00000600284 KIAA1644Q3SXP7 199 aa9.64□□□□□ -0.87
VRK3-221ENST00000600284 ERASQ7Z444 233 aa9.64□□□□□ -0.87
VRK3-221ENST00000600284 SEC11CQ9BY50 192 aa9.64□□□□□ -0.87
VRK3-221ENST00000600284 GNB1LQ9BYB4 327 aa9.64□□□□□ -0.87
VRK3-221ENST00000600284 M0QXV9 152 aa9.63□□□□□ -0.87
VRK3-221ENST00000600284 S100PP25815 95 aa9.63□□□□□ -0.87
VRK3-221ENST00000600284 KRTAP7-1Q8IUC3 87 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms