RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 A0A0J9YXV3 536 aa8.35□□□□□ -1.07
CHMP2A-206ENST00000600118 C5orf52A6NGY3 159 aa8.35□□□□□ -1.07
CHMP2A-206ENST00000600118 S100A6P06703 90 aa8.35□□□□□ -1.07
CHMP2A-206ENST00000600118 PRSS1P07477 247 aa8.35□□□□□ -1.07
CHMP2A-206ENST00000600118 COX6A2Q02221 97 aa8.35□□□□□ -1.07
CHMP2A-206ENST00000600118 WFDC2Q14508 124 aa8.35□□□□□ -1.07
CHMP2A-206ENST00000600118 IGLV4-69A0A075B6H9 119 aa8.34□□□□□ -1.07
CHMP2A-206ENST00000600118 A0A087WTM6 91 aa8.34□□□□□ -1.07
CHMP2A-206ENST00000600118 TINCRA0A1B0GVN0 87 aa8.34□□□□□ -1.07
CHMP2A-206ENST00000600118 IGLC3P0DOY3 106 aa8.34□□□□□ -1.07
CHMP2A-206ENST00000600118 SEC11AP67812 179 aa8.34□□□□□ -1.07
CHMP2A-206ENST00000600118 IGLV5-45A0A087WSX0 123 aa8.33□□□□□ -1.08
CHMP2A-206ENST00000600118 COX7A2LO14548 114 aa8.33□□□□□ -1.08
CHMP2A-206ENST00000600118 SNRPEP62304 92 aaKnown RBP8.33□□□□□ -1.08
CHMP2A-206ENST00000600118 HERVK_113P63121 156 aa8.33□□□□□ -1.08
CHMP2A-206ENST00000600118 DNAH11Q96DT5 4516 aa8.33□□□□□ -1.08
CHMP2A-206ENST00000600118 A0A087WZ39 114 aa8.32□□□□□ -1.08
CHMP2A-206ENST00000600118 USP17L23D6RBM5 183 aa8.32□□□□□ -1.08
CHMP2A-206ENST00000600118 ODF1Q14990 250 aa8.32□□□□□ -1.08
CHMP2A-206ENST00000600118 SPATA12Q7Z6I5 190 aa8.32□□□□□ -1.08
CHMP2A-206ENST00000600118 C5orf38Q86SI9 138 aa8.32□□□□□ -1.08
CHMP2A-206ENST00000600118 C15orf56Q8N910 161 aa8.32□□□□□ -1.08
CHMP2A-206ENST00000600118 HIST1H2BLQ99880 126 aa8.32□□□□□ -1.08
CHMP2A-206ENST00000600118 MAP1LC3CQ9BXW4 147 aa8.32□□□□□ -1.08
CHMP2A-206ENST00000600118 CHTOPQ9Y3Y2 248 aaKnown RBP8.32□□□□□ -1.08
CHMP2A-206ENST00000600118 F8VRH5 84 aa8.31□□□□□ -1.08
CHMP2A-206ENST00000600118 SYS1-DBNDD2H3BUS1 97 aa8.31□□□□□ -1.08
CHMP2A-206ENST00000600118 LECT2O14960 151 aa8.31□□□□□ -1.08
CHMP2A-206ENST00000600118 LINC01561Q8N1V8 128 aa8.31□□□□□ -1.08
CHMP2A-206ENST00000600118 GEMIN7Q9H840 131 aaKnown RBP8.31□□□□□ -1.08
CHMP2A-206ENST00000600118 MRPL35Q9NZE8 188 aaKnown RBP8.31□□□□□ -1.08
CHMP2A-206ENST00000600118 CDKN2A-AS1Q9UH64 79 aa8.31□□□□□ -1.08
CHMP2A-206ENST00000600118 IGHV1-58A0A0C4DH39 117 aa8.3□□□□□ -1.08
CHMP2A-206ENST00000600118 C11orf86A6NJI1 115 aa8.3□□□□□ -1.08
CHMP2A-206ENST00000600118 C3orf79P0CE67 100 aa8.3□□□□□ -1.08
CHMP2A-206ENST00000600118 S100A2P29034 98 aa8.3□□□□□ -1.08
CHMP2A-206ENST00000600118 CHAC1Q9BUX1 264 aa8.3□□□□□ -1.08
CHMP2A-206ENST00000600118 GVQW2A0A096LPI5 108 aaPredicted RBP8.29□□□□□ -1.08
CHMP2A-206ENST00000600118 A0A1B0GVY2 172 aa8.29□□□□□ -1.08
CHMP2A-206ENST00000600118 H0Y8G0 127 aa8.29□□□□□ -1.08
CHMP2A-206ENST00000600118 ZNF22P17026 224 aaPredicted RBP8.29□□□□□ -1.08
CHMP2A-206ENST00000600118 CFAP161Q6P656 301 aa8.29□□□□□ -1.08
CHMP2A-206ENST00000600118 PET117Q6UWS5 81 aa8.29□□□□□ -1.08
CHMP2A-206ENST00000600118 LINC00469Q8N7U9 141 aa8.29□□□□□ -1.08
CHMP2A-206ENST00000600118 Q8N814 137 aa8.29□□□□□ -1.08
CHMP2A-206ENST00000600118 TMA7Q9Y2S6 64 aaKnown RBP8.29□□□□□ -1.08
CHMP2A-206ENST00000600118 IGHV3-64A0A075B6Q5 118 aa8.28□□□□□ -1.08
CHMP2A-206ENST00000600118 MALP21145 153 aa8.28□□□□□ -1.08
CHMP2A-206ENST00000600118 C14orf177Q52M58 125 aa8.28□□□□□ -1.08
CHMP2A-206ENST00000600118 PKD1P98161 4303 aa8.28□□□□□ -1.08
CHMP2A-206ENST00000600118 EREGO14944 169 aa8.27□□□□□ -1.09
CHMP2A-206ENST00000600118 APOMO95445 188 aa8.27□□□□□ -1.09
CHMP2A-206ENST00000600118 KRTDAPP60985 99 aa8.27□□□□□ -1.09
CHMP2A-206ENST00000600118 LINC01545Q5VT33 79 aa8.27□□□□□ -1.09
CHMP2A-206ENST00000600118 SMIM1B2RUZ4 78 aa8.26□□□□□ -1.09
CHMP2A-206ENST00000600118 OR10D4PQ8NGN7 298 aa8.26□□□□□ -1.09
CHMP2A-206ENST00000600118 IGLV5-39A0A0G2JS06 123 aa8.25□□□□□ -1.09
CHMP2A-206ENST00000600118 hDV102S1A0JD36 115 aa8.25□□□□□ -1.09
CHMP2A-206ENST00000600118 H3BRM9 83 aa8.25□□□□□ -1.09
CHMP2A-206ENST00000600118 DPM2O94777 84 aa8.25□□□□□ -1.09
CHMP2A-206ENST00000600118 SLPIP03973 132 aa8.25□□□□□ -1.09
CHMP2A-206ENST00000600118 PLNP26678 52 aa8.25□□□□□ -1.09
CHMP2A-206ENST00000600118 KRTAP10-2P60368 255 aa8.25□□□□□ -1.09
CHMP2A-206ENST00000600118 KIAA0087Q14695 138 aa8.25□□□□□ -1.09
CHMP2A-206ENST00000600118 HIGD2BQ4VC39 106 aa8.25□□□□□ -1.09
CHMP2A-206ENST00000600118 NTN5Q8WTR8 489 aaPredicted RBP8.25□□□□□ -1.09
CHMP2A-206ENST00000600118 ORAOV1Q8WV07 137 aa8.25□□□□□ -1.09
CHMP2A-206ENST00000600118 PMCHL2Q9BQD1 86 aa8.25□□□□□ -1.09
CHMP2A-206ENST00000600118 IGKCP01834 107 aa8.24□□□□□ -1.09
CHMP2A-206ENST00000600118 SPINK8P0C7L1 97 aa8.24□□□□□ -1.09
CHMP2A-206ENST00000600118 SPAG11BQ08648 103 aa8.24□□□□□ -1.09
CHMP2A-206ENST00000600118 TMEM170BQ5T4T1 132 aa8.24□□□□□ -1.09
CHMP2A-206ENST00000600118 HECTD4Q9Y4D8 3996 aa8.24□□□□□ -1.09
CHMP2A-206ENST00000600118 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.23□□□□□ -1.09
CHMP2A-206ENST00000600118 TMEM223A0PJW6 202 aa8.23□□□□□ -1.09
CHMP2A-206ENST00000600118 CNBPP62633 177 aaKnown RBP8.23□□□□□ -1.09
CHMP2A-206ENST00000600118 LINC00526Q96FQ7 95 aa8.23□□□□□ -1.09
CHMP2A-206ENST00000600118 C2orf48Q96LS8 159 aa8.23□□□□□ -1.09
CHMP2A-206ENST00000600118 DNAH5Q8TE73 4624 aa8.22□□□□□ -1.09
CHMP2A-206ENST00000600118 C20orf202A1L168 122 aa8.22□□□□□ -1.09
CHMP2A-206ENST00000600118 ZNF561-AS1K7EIQ3 104 aa8.22□□□□□ -1.09
CHMP2A-206ENST00000600118 Q8IZM0 81 aa8.22□□□□□ -1.09
CHMP2A-206ENST00000600118 PGPEP1Q9NXJ5 209 aa8.22□□□□□ -1.09
CHMP2A-206ENST00000600118 F8WDY8 70 aa8.21□□□□□ -1.1
CHMP2A-206ENST00000600118 FUSP35637 526 aaKnown RBP eCLIP8.21□□□□□ -1.1
CHMP2A-206ENST00000600118 CDPF1Q6NVV7 123 aa8.21□□□□□ -1.1
CHMP2A-206ENST00000600118 DYNC1H1Q14204 4646 aaKnown RBP8.2□□□□□ -1.1
CHMP2A-206ENST00000600118 IGLV5-52A0A0A0MRZ9 124 aa8.2□□□□□ -1.1
CHMP2A-206ENST00000600118 AKR1D1P51857 326 aa8.19□□□□□ -1.1
CHMP2A-206ENST00000600118 SYCNQ0VAF6 134 aa8.19□□□□□ -1.1
CHMP2A-206ENST00000600118 C9orf163Q8N9P6 203 aa8.19□□□□□ -1.1
CHMP2A-206ENST00000600118 COX7B2Q8TF08 81 aa8.19□□□□□ -1.1
CHMP2A-206ENST00000600118 TOMM7Q9P0U1 55 aa8.19□□□□□ -1.1
CHMP2A-206ENST00000600118 EPPK1P58107 5090 aaKnown RBP8.19□□□□□ -1.1
CHMP2A-206ENST00000600118 PRSS2P07478 247 aa8.18□□□□□ -1.1
CHMP2A-206ENST00000600118 C6orf226Q5I0X4 101 aa8.18□□□□□ -1.1
CHMP2A-206ENST00000600118 C10orf25Q5T742 122 aa8.18□□□□□ -1.1
CHMP2A-206ENST00000600118 Q6ZRU5 148 aa8.18□□□□□ -1.1
CHMP2A-206ENST00000600118 CARD19Q96LW7 228 aa8.18□□□□□ -1.1
CHMP2A-206ENST00000600118 CAMK2N2Q96S95 79 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms