RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 KRTDAPP60985 99 aa9.42□□□□□ -0.9
IRF3-223ENST00000599223 LINC00269Q8N2A0 174 aa9.42□□□□□ -0.9
IRF3-223ENST00000599223 C20orf202A1L168 122 aa9.41□□□□□ -0.9
IRF3-223ENST00000599223 SDHAF1A6NFY7 115 aa9.41□□□□□ -0.9
IRF3-223ENST00000599223 LINC01549A6NIU2 74 aa9.41□□□□□ -0.9
IRF3-223ENST00000599223 SCGB1D1O95968 90 aa9.41□□□□□ -0.9
IRF3-223ENST00000599223 FCER1GP30273 86 aa9.41□□□□□ -0.9
IRF3-223ENST00000599223 PMCHL1Q16048 86 aa9.41□□□□□ -0.9
IRF3-223ENST00000599223 C9orf163Q8N9P6 203 aa9.41□□□□□ -0.9
IRF3-223ENST00000599223 MAP1LC3CQ9BXW4 147 aa9.41□□□□□ -0.9
IRF3-223ENST00000599223 JOSD1Q15040 202 aaPredicted RBP9.4□□□□□ -0.9
IRF3-223ENST00000599223 PLA2G2DQ9UNK4 145 aa9.4□□□□□ -0.9
IRF3-223ENST00000599223 IGLV10-54A0A075B6I4 117 aa9.39□□□□□ -0.91
IRF3-223ENST00000599223 I3L3M4 83 aa9.39□□□□□ -0.91
IRF3-223ENST00000599223 MT1HL1P0DM35 61 aa9.39□□□□□ -0.91
IRF3-223ENST00000599223 PKIAP61925 76 aa9.39□□□□□ -0.91
IRF3-223ENST00000599223 LINC00518Q8N0U6 118 aa9.39□□□□□ -0.91
IRF3-223ENST00000599223 C12orf57Q99622 126 aa9.39□□□□□ -0.91
IRF3-223ENST00000599223 TNXBP22105 4242 aa9.39□□□□□ -0.91
IRF3-223ENST00000599223 TRBV25-1A0A075B6N4 114 aa9.38□□□□□ -0.91
IRF3-223ENST00000599223 TRBV27A0A0K0K1C4 114 aa9.38□□□□□ -0.91
IRF3-223ENST00000599223 POLR2KP53803 58 aaKnown RBP9.38□□□□□ -0.91
IRF3-223ENST00000599223 S100A12P80511 92 aa9.38□□□□□ -0.91
IRF3-223ENST00000599223 DGAT2L7PQ6IED9 249 aa9.38□□□□□ -0.91
IRF3-223ENST00000599223 SDIM1Q6ZPB5 146 aa9.38□□□□□ -0.91
IRF3-223ENST00000599223 C20orf203Q8NBC4 194 aa9.38□□□□□ -0.91
IRF3-223ENST00000599223 ATP5LO75964 103 aa9.37□□□□□ -0.91
IRF3-223ENST00000599223 REG3AQ06141 175 aa9.37□□□□□ -0.91
IRF3-223ENST00000599223 TMEM97Q5BJF2 176 aa9.37□□□□□ -0.91
IRF3-223ENST00000599223 PYY3Q5JQD4 70 aa9.37□□□□□ -0.91
IRF3-223ENST00000599223 IGLV4-60A0A075B6I1 120 aa9.36□□□□□ -0.91
IRF3-223ENST00000599223 SLPIP03973 132 aa9.36□□□□□ -0.91
IRF3-223ENST00000599223 C3orf79P0CE67 100 aa9.36□□□□□ -0.91
IRF3-223ENST00000599223 CHTF8P0CG12 524 aa9.36□□□□□ -0.91
IRF3-223ENST00000599223 CIRBPQ14011 172 aaKnown RBP9.36□□□□□ -0.91
IRF3-223ENST00000599223 CNBPP62633 177 aaKnown RBP9.35□□□□□ -0.91
IRF3-223ENST00000599223 PET117Q6UWS5 81 aa9.35□□□□□ -0.91
IRF3-223ENST00000599223 IFI27L1Q96BM0 104 aa9.35□□□□□ -0.91
IRF3-223ENST00000599223 CYSLTR1Q9Y271 337 aa9.35□□□□□ -0.91
IRF3-223ENST00000599223 hDV102S1A0JD36 115 aa9.34□□□□□ -0.91
IRF3-223ENST00000599223 SYS1-DBNDD2H3BUS1 97 aa9.34□□□□□ -0.91
IRF3-223ENST00000599223 COTL1Q14019 142 aa9.34□□□□□ -0.91
IRF3-223ENST00000599223 H0Y8G0 127 aa9.33□□□□□ -0.92
IRF3-223ENST00000599223 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.33□□□□□ -0.92
IRF3-223ENST00000599223 C2orf66Q6UXQ4 117 aa9.33□□□□□ -0.92
IRF3-223ENST00000599223 Q6ZN92 141 aa9.33□□□□□ -0.92
IRF3-223ENST00000599223 TOMM6Q96B49 74 aa9.33□□□□□ -0.92
IRF3-223ENST00000599223 SCGB3A1Q96QR1 104 aa9.33□□□□□ -0.92
IRF3-223ENST00000599223 A0A096LNJ9 63 aa9.32□□□□□ -0.92
IRF3-223ENST00000599223 SMAGPQ0VAQ4 97 aa9.32□□□□□ -0.92
IRF3-223ENST00000599223 TMEM243Q9BU79 118 aa9.32□□□□□ -0.92
IRF3-223ENST00000599223 TSHBP01222 138 aa9.31□□□□□ -0.92
IRF3-223ENST00000599223 C15orf56Q8N910 161 aa9.31□□□□□ -0.92
IRF3-223ENST00000599223 SPACA4Q8TDM5 124 aa9.31□□□□□ -0.92
IRF3-223ENST00000599223 A0A087WYN8 130 aa9.3□□□□□ -0.92
IRF3-223ENST00000599223 A0A1B0GUV1 79 aa9.3□□□□□ -0.92
IRF3-223ENST00000599223 HSBP1L1C9JCN9 74 aa9.3□□□□□ -0.92
IRF3-223ENST00000599223 LRP2P98164 4655 aa9.3□□□□□ -0.92
IRF3-223ENST00000599223 PAPPA-AS1Q5QFB9 102 aa9.3□□□□□ -0.92
IRF3-223ENST00000599223 LINC00173Q6ZV60 143 aa9.3□□□□□ -0.92
IRF3-223ENST00000599223 ERASQ7Z444 233 aa9.3□□□□□ -0.92
IRF3-223ENST00000599223 TMEM141Q96I45 108 aa9.3□□□□□ -0.92
IRF3-223ENST00000599223 VAMP8Q9BV40 100 aa9.3□□□□□ -0.92
IRF3-223ENST00000599223 IGHV3-64A0A075B6Q5 118 aa9.29□□□□□ -0.92
IRF3-223ENST00000599223 TRAV8-4A0A0B4J246 113 aa9.29□□□□□ -0.92
IRF3-223ENST00000599223 LINC01545Q5VT33 79 aa9.28□□□□□ -0.92
IRF3-223ENST00000599223 TIMM17AQ99595 171 aa9.28□□□□□ -0.92
IRF3-223ENST00000599223 TEX43Q6ZNM6 134 aa9.27□□□□□ -0.93
IRF3-223ENST00000599223 Q6ZRU5 148 aa9.27□□□□□ -0.93
IRF3-223ENST00000599223 GAGE12HA6NDE8 117 aa9.26□□□□□ -0.93
IRF3-223ENST00000599223 TSTD3H0UI37 97 aa9.26□□□□□ -0.93
IRF3-223ENST00000599223 UBE2L6O14933 153 aa9.26□□□□□ -0.93
IRF3-223ENST00000599223 NPSP0C0P6 89 aa9.26□□□□□ -0.93
IRF3-223ENST00000599223 PLAC8Q9NZF1 115 aa9.26□□□□□ -0.93
IRF3-223ENST00000599223 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.25□□□□□ -0.93
IRF3-223ENST00000599223 TRAV12-1A0A0B4J245 112 aa9.25□□□□□ -0.93
IRF3-223ENST00000599223 IGKV3OR2-268A0A0C4DH90 116 aa9.25□□□□□ -0.93
IRF3-223ENST00000599223 RPL39P62891 51 aaKnown RBP9.25□□□□□ -0.93
IRF3-223ENST00000599223 ODF1Q14990 250 aa9.25□□□□□ -0.93
IRF3-223ENST00000599223 HIGD2BQ4VC39 106 aa9.25□□□□□ -0.93
IRF3-223ENST00000599223 SPANXA1Q9NS26 97 aa9.25□□□□□ -0.93
IRF3-223ENST00000599223 PLNP26678 52 aa9.24□□□□□ -0.93
IRF3-223ENST00000599223 COX6A2Q02221 97 aa9.24□□□□□ -0.93
IRF3-223ENST00000599223 PYGO1Q9Y3Y4 419 aa9.24□□□□□ -0.93
IRF3-223ENST00000599223 IGIPA6NJ69 53 aa9.23□□□□□ -0.93
IRF3-223ENST00000599223 DPM2O94777 84 aa9.23□□□□□ -0.93
IRF3-223ENST00000599223 PMVKQ15126 192 aa9.23□□□□□ -0.93
IRF3-223ENST00000599223 ATOH7Q8N100 152 aa9.23□□□□□ -0.93
IRF3-223ENST00000599223 PAM16Q9Y3D7 125 aa9.23□□□□□ -0.93
IRF3-223ENST00000599223 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.22□□□□□ -0.93
IRF3-223ENST00000599223 IGKV2-24A0A0C4DH68 120 aa9.22□□□□□ -0.93
IRF3-223ENST00000599223 IGKV2-29A2NJV5 120 aaPredicted RBP9.22□□□□□ -0.93
IRF3-223ENST00000599223 H7C423 109 aa9.22□□□□□ -0.93
IRF3-223ENST00000599223 SPATA45Q537H7 98 aa9.22□□□□□ -0.93
IRF3-223ENST00000599223 AMMECR1LQ6DCA0 310 aa9.22□□□□□ -0.93
IRF3-223ENST00000599223 CHCHD10Q8WYQ3 142 aaPredicted RBP9.22□□□□□ -0.93
IRF3-223ENST00000599223 DPH3Q96FX2 82 aa9.22□□□□□ -0.93
IRF3-223ENST00000599223 TMEM101Q96IK0 257 aa9.22□□□□□ -0.93
IRF3-223ENST00000599223 TIMM21Q9BVV7 248 aa9.22□□□□□ -0.93
IRF3-223ENST00000599223 VCX2Q9H322 139 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms