RNA–Protein interactions for RNA: ENST00000599138.5

VRK3-215, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 503 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-215ENST00000599138 ORMDL2Q53FV1 153 aa6.15□□□□□ -1.42
VRK3-215ENST00000599138 C2orf66Q6UXQ4 117 aa6.15□□□□□ -1.42
VRK3-215ENST00000599138 C5orf38Q86SI9 138 aa6.15□□□□□ -1.42
VRK3-215ENST00000599138 CARD19Q96LW7 228 aa6.15□□□□□ -1.42
VRK3-215ENST00000599138 NXT2Q9NPJ8 142 aaKnown RBP6.15□□□□□ -1.42
VRK3-215ENST00000599138 PLAC8Q9NZF1 115 aa6.15□□□□□ -1.42
VRK3-215ENST00000599138 PKHD1L1Q86WI1 4243 aa6.14□□□□□ -1.43
VRK3-215ENST00000599138 IGLV4-69A0A075B6H9 119 aa6.14□□□□□ -1.43
VRK3-215ENST00000599138 IGIPA6NJ69 53 aa6.14□□□□□ -1.43
VRK3-215ENST00000599138 IFITM10A6NMD0 228 aa6.14□□□□□ -1.43
VRK3-215ENST00000599138 NPSP0C0P6 89 aa6.14□□□□□ -1.43
VRK3-215ENST00000599138 COX19Q49B96 90 aa6.14□□□□□ -1.43
VRK3-215ENST00000599138 TMEM141Q96I45 108 aa6.14□□□□□ -1.43
VRK3-215ENST00000599138 C2orf48Q96LS8 159 aa6.14□□□□□ -1.43
VRK3-215ENST00000599138 AMELXQ99217 191 aa6.14□□□□□ -1.43
VRK3-215ENST00000599138 CYSLTR1Q9Y271 337 aa6.14□□□□□ -1.43
VRK3-215ENST00000599138 A0A096LNI7 61 aa6.13□□□□□ -1.43
VRK3-215ENST00000599138 LINC01546A6NGU7 62 aa6.13□□□□□ -1.43
VRK3-215ENST00000599138 APOMO95445 188 aa6.13□□□□□ -1.43
VRK3-215ENST00000599138 LINC00242Q5T6M2 205 aa6.13□□□□□ -1.43
VRK3-215ENST00000599138 Q6ZRU5 148 aa6.13□□□□□ -1.43
VRK3-215ENST00000599138 LINC00173Q6ZV60 143 aa6.13□□□□□ -1.43
VRK3-215ENST00000599138 OR10D4PQ8NGN7 298 aa6.13□□□□□ -1.43
VRK3-215ENST00000599138 ALKBH7Q9BT30 221 aaPredicted RBP6.13□□□□□ -1.43
VRK3-215ENST00000599138 RPS10P5Q9NQ39 176 aa6.13□□□□□ -1.43
VRK3-215ENST00000599138 PKIGQ9Y2B9 76 aa6.13□□□□□ -1.43
VRK3-215ENST00000599138 A0A087WZ39 114 aa6.12□□□□□ -1.43
VRK3-215ENST00000599138 IGKV2-24A0A0C4DH68 120 aa6.12□□□□□ -1.43
VRK3-215ENST00000599138 MT-ND6P03923 174 aa6.12□□□□□ -1.43
VRK3-215ENST00000599138 UBE2D1P51668 147 aa6.12□□□□□ -1.43
VRK3-215ENST00000599138 RPL37AP61513 92 aaKnown RBP6.12□□□□□ -1.43
VRK3-215ENST00000599138 DPH3Q96FX2 82 aa6.12□□□□□ -1.43
VRK3-215ENST00000599138 LINC00474Q9P2X8 69 aa6.12□□□□□ -1.43
VRK3-215ENST00000599138 FAT3Q8TDW7 4589 aa6.12□□□□□ -1.43
VRK3-215ENST00000599138 F8WDY8 70 aa6.11□□□□□ -1.43
VRK3-215ENST00000599138 G0S2P27469 103 aa6.11□□□□□ -1.43
VRK3-215ENST00000599138 SPAG11BQ08648 103 aa6.11□□□□□ -1.43
VRK3-215ENST00000599138 RNF151Q2KHN1 245 aa6.11□□□□□ -1.43
VRK3-215ENST00000599138 MAJINQ3KP22 176 aa6.11□□□□□ -1.43
VRK3-215ENST00000599138 TEX43Q6ZNM6 134 aa6.11□□□□□ -1.43
VRK3-215ENST00000599138 FAM19A3Q7Z5A8 133 aa6.11□□□□□ -1.43
VRK3-215ENST00000599138 TOMM6Q96B49 74 aa6.11□□□□□ -1.43
VRK3-215ENST00000599138 CAMK2N2Q96S95 79 aa6.11□□□□□ -1.43
VRK3-215ENST00000599138 TIMM17AQ99595 171 aa6.11□□□□□ -1.43
VRK3-215ENST00000599138 TGIF2-C20orf24A0A0A6YYL0 155 aa6.1□□□□□ -1.43
VRK3-215ENST00000599138 LOC107984640A0A0U1RRK4 108 aa6.1□□□□□ -1.43
VRK3-215ENST00000599138 KRTAP29-1A8MX34 341 aaPredicted RBP6.1□□□□□ -1.43
VRK3-215ENST00000599138 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.1□□□□□ -1.43
VRK3-215ENST00000599138 APOC3P02656 99 aa6.1□□□□□ -1.43
VRK3-215ENST00000599138 HNRNPA3P51991 378 aaKnown RBP6.1□□□□□ -1.43
VRK3-215ENST00000599138 PTTG1IPP53801 180 aa6.1□□□□□ -1.43
VRK3-215ENST00000599138 KIAA0087Q14695 138 aa6.1□□□□□ -1.43
VRK3-215ENST00000599138 ZC2HC1BQ5TFG8 222 aa6.1□□□□□ -1.43
VRK3-215ENST00000599138 Q6ZN92 141 aa6.1□□□□□ -1.43
VRK3-215ENST00000599138 LINC01561Q8N1V8 128 aa6.1□□□□□ -1.43
VRK3-215ENST00000599138 STPG4Q8N801 248 aa6.1□□□□□ -1.43
VRK3-215ENST00000599138 ORAOV1Q8WV07 137 aa6.1□□□□□ -1.43
VRK3-215ENST00000599138 C2orf88Q9BSF0 95 aa6.1□□□□□ -1.43
VRK3-215ENST00000599138 MRPL18Q9H0U6 180 aaKnown RBP6.1□□□□□ -1.43
VRK3-215ENST00000599138 VCX2Q9H322 139 aa6.1□□□□□ -1.43
VRK3-215ENST00000599138 FABP9Q0Z7S8 132 aa6.09□□□□□ -1.43
VRK3-215ENST00000599138 SVBPQ8N300 66 aa6.09□□□□□ -1.43
VRK3-215ENST00000599138 MRPL35Q9NZE8 188 aaKnown RBP6.09□□□□□ -1.43
VRK3-215ENST00000599138 SNAPINO95295 136 aa6.08□□□□□ -1.44
VRK3-215ENST00000599138 PAPPA-AS1Q5QFB9 102 aa6.08□□□□□ -1.44
VRK3-215ENST00000599138 C10orf25Q5T742 122 aa6.08□□□□□ -1.44
VRK3-215ENST00000599138 ERASQ7Z444 233 aa6.08□□□□□ -1.44
VRK3-215ENST00000599138 A0A0J9YXV3 536 aa6.07□□□□□ -1.44
VRK3-215ENST00000599138 LINC01549A6NIU2 74 aa6.07□□□□□ -1.44
VRK3-215ENST00000599138 NDUFA1O15239 70 aa6.07□□□□□ -1.44
VRK3-215ENST00000599138 TLX1NBP0CAT3 122 aa6.07□□□□□ -1.44
VRK3-215ENST00000599138 GAGE2BQ13066 116 aa6.07□□□□□ -1.44
VRK3-215ENST00000599138 NDUFA5Q16718 116 aa6.07□□□□□ -1.44
VRK3-215ENST00000599138 UNQ6190/PRO20217Q6UXQ8 127 aa6.07□□□□□ -1.44
VRK3-215ENST00000599138 C7orf33Q8WU49 177 aa6.07□□□□□ -1.44
VRK3-215ENST00000599138 YPEL4Q96NS1 127 aa6.07□□□□□ -1.44
VRK3-215ENST00000599138 SCGB3A1Q96QR1 104 aa6.07□□□□□ -1.44
VRK3-215ENST00000599138 OXTP01178 125 aa6.06□□□□□ -1.44
VRK3-215ENST00000599138 HERVK_113P63121 156 aa6.06□□□□□ -1.44
VRK3-215ENST00000599138 SEC11AP67812 179 aa6.06□□□□□ -1.44
VRK3-215ENST00000599138 URB1-AS1Q96HZ7 61 aa6.06□□□□□ -1.44
VRK3-215ENST00000599138 C6orf48Q9UBA6 75 aa6.06□□□□□ -1.44
VRK3-215ENST00000599138 TRAPPC1Q9Y5R8 145 aa6.06□□□□□ -1.44
VRK3-215ENST00000599138 A0A096LNJ9 63 aa6.05□□□□□ -1.44
VRK3-215ENST00000599138 A0A1W2PNN7 141 aa6.05□□□□□ -1.44
VRK3-215ENST00000599138 PRR3P79522 188 aaKnown RBP6.05□□□□□ -1.44
VRK3-215ENST00000599138 FA2HQ7L5A8 372 aa6.05□□□□□ -1.44
VRK3-215ENST00000599138 C18orf32Q8TCD1 76 aa6.05□□□□□ -1.44
VRK3-215ENST00000599138 CDKN2A-AS1Q9UH64 79 aa6.05□□□□□ -1.44
VRK3-215ENST00000599138 IGLV5-45A0A087WSX0 123 aa6.04□□□□□ -1.44
VRK3-215ENST00000599138 TRBV30A0A0K0K1B3 111 aa6.04□□□□□ -1.44
VRK3-215ENST00000599138 J3QL48 77 aa6.04□□□□□ -1.44
VRK3-215ENST00000599138 RPL18AQ02543 176 aaKnown RBP6.04□□□□□ -1.44
VRK3-215ENST00000599138 C9orf116Q5BN46 136 aaPredicted RBP6.04□□□□□ -1.44
VRK3-215ENST00000599138 C2orf82Q6UX34 121 aa6.04□□□□□ -1.44
VRK3-215ENST00000599138 Q6ZRP5 223 aa6.04□□□□□ -1.44
VRK3-215ENST00000599138 CST9LQ9H4G1 147 aa6.04□□□□□ -1.44
VRK3-215ENST00000599138 TINCRA0A1B0GVN0 87 aa6.03□□□□□ -1.44
VRK3-215ENST00000599138 LINC00614P0C842 121 aa6.03□□□□□ -1.44
VRK3-215ENST00000599138 Q8IZM0 81 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms