RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 Q6ZRP5 223 aa9.65□□□□□ -0.86
SMG9-208ENST00000598886 TIMM21Q9BVV7 248 aa9.65□□□□□ -0.86
SMG9-208ENST00000598886 COLCA2A8K830 154 aa9.64□□□□□ -0.87
SMG9-208ENST00000598886 COX7A2LO14548 114 aa9.64□□□□□ -0.87
SMG9-208ENST00000598886 FAM104BQ5XKR9 115 aa9.64□□□□□ -0.87
SMG9-208ENST00000598886 TRBV24-1A0A075B6N3 115 aa9.63□□□□□ -0.87
SMG9-208ENST00000598886 TRAV9-1A0A075B6T8 112 aa9.63□□□□□ -0.87
SMG9-208ENST00000598886 SMIM27A0A1W2PRY6 76 aa9.63□□□□□ -0.87
SMG9-208ENST00000598886 APOMO95445 188 aa9.63□□□□□ -0.87
SMG9-208ENST00000598886 PPP1R17O96001 155 aa9.63□□□□□ -0.87
SMG9-208ENST00000598886 S100PP25815 95 aa9.63□□□□□ -0.87
SMG9-208ENST00000598886 FCER1GP30273 86 aa9.63□□□□□ -0.87
SMG9-208ENST00000598886 RPL32P62910 135 aaKnown RBP9.63□□□□□ -0.87
SMG9-208ENST00000598886 C2orf48Q96LS8 159 aa9.63□□□□□ -0.87
SMG9-208ENST00000598886 NAT8BQ9UHF3 227 aa9.63□□□□□ -0.87
SMG9-208ENST00000598886 GAGE2BQ13066 116 aa9.62□□□□□ -0.87
SMG9-208ENST00000598886 REG3GQ6UW15 175 aa9.62□□□□□ -0.87
SMG9-208ENST00000598886 TRAV13-1A0A0B4J241 112 aa9.61□□□□□ -0.87
SMG9-208ENST00000598886 CAMK2N2Q96S95 79 aa9.61□□□□□ -0.87
SMG9-208ENST00000598886 KIR2DL4Q99706 377 aa9.61□□□□□ -0.87
SMG9-208ENST00000598886 C20orf78Q9BR46 151 aa9.61□□□□□ -0.87
SMG9-208ENST00000598886 PSORS1C2Q9UIG4 136 aa9.61□□□□□ -0.87
SMG9-208ENST00000598886 MALP21145 153 aa9.6□□□□□ -0.87
SMG9-208ENST00000598886 RPL39P62891 51 aaKnown RBP9.6□□□□□ -0.87
SMG9-208ENST00000598886 C9orf116Q5BN46 136 aaPredicted RBP9.6□□□□□ -0.87
SMG9-208ENST00000598886 C5orf38Q86SI9 138 aa9.6□□□□□ -0.87
SMG9-208ENST00000598886 IGHV3OR16-9A0A0B4J2B5 98 aa9.59□□□□□ -0.87
SMG9-208ENST00000598886 A0A1B0GXF2 115 aa9.59□□□□□ -0.87
SMG9-208ENST00000598886 RAB5AP20339 215 aa9.59□□□□□ -0.87
SMG9-208ENST00000598886 SPAG11BQ08648 103 aa9.59□□□□□ -0.87
SMG9-208ENST00000598886 RNF151Q2KHN1 245 aa9.59□□□□□ -0.87
SMG9-208ENST00000598886 TGIF2-C20orf24A0A0A6YYL0 155 aa9.58□□□□□ -0.88
SMG9-208ENST00000598886 TNFRSF6BO95407 300 aa9.58□□□□□ -0.88
SMG9-208ENST00000598886 SMAGPQ0VAQ4 97 aa9.58□□□□□ -0.88
SMG9-208ENST00000598886 KRTAP11-1Q8IUC1 163 aa9.58□□□□□ -0.88
SMG9-208ENST00000598886 OR10D4PQ8NGN7 298 aa9.58□□□□□ -0.88
SMG9-208ENST00000598886 OPRPNQ99935 248 aaPredicted RBP9.58□□□□□ -0.88
SMG9-208ENST00000598886 SMIM2Q9BVW6 85 aa9.58□□□□□ -0.88
SMG9-208ENST00000598886 PHF5AQ7RTV0 110 aaKnown RBP9.57□□□□□ -0.88
SMG9-208ENST00000598886 MRPL35Q9NZE8 188 aaKnown RBP9.57□□□□□ -0.88
SMG9-208ENST00000598886 LPAP08519 4548 aa9.56□□□□□ -0.88
SMG9-208ENST00000598886 A0A1B0GW15 77 aa9.56□□□□□ -0.88
SMG9-208ENST00000598886 NPYP01303 97 aa9.56□□□□□ -0.88
SMG9-208ENST00000598886 MRPS36P82909 103 aaKnown RBP9.56□□□□□ -0.88
SMG9-208ENST00000598886 C10orf25Q5T742 122 aa9.56□□□□□ -0.88
SMG9-208ENST00000598886 RPL18AQ02543 176 aaKnown RBP9.55□□□□□ -0.88
SMG9-208ENST00000598886 KRTAP7-1Q8IUC3 87 aa9.55□□□□□ -0.88
SMG9-208ENST00000598886 TMEM18Q96B42 140 aa9.55□□□□□ -0.88
SMG9-208ENST00000598886 SPANXA1Q9NS26 97 aa9.55□□□□□ -0.88
SMG9-208ENST00000598886 D6R8Y8 96 aa9.54□□□□□ -0.88
SMG9-208ENST00000598886 TLX1NBP0CAT3 122 aa9.54□□□□□ -0.88
SMG9-208ENST00000598886 CKS2P33552 79 aa9.54□□□□□ -0.88
SMG9-208ENST00000598886 KIAA0087Q14695 138 aa9.54□□□□□ -0.88
SMG9-208ENST00000598886 ORAOV1Q8WV07 137 aa9.54□□□□□ -0.88
SMG9-208ENST00000598886 FAM168BA1KXE4 195 aa9.53□□□□□ -0.88
SMG9-208ENST00000598886 F8WDY8 70 aa9.53□□□□□ -0.88
SMG9-208ENST00000598886 TCAPO15273 167 aa9.53□□□□□ -0.88
SMG9-208ENST00000598886 HBBP68871 147 aa9.53□□□□□ -0.88
SMG9-208ENST00000598886 COX19Q49B96 90 aa9.53□□□□□ -0.88
SMG9-208ENST00000598886 MRPL54Q6P161 138 aaKnown RBP9.53□□□□□ -0.88
SMG9-208ENST00000598886 ATP5L2Q7Z4Y8 100 aa9.53□□□□□ -0.88
SMG9-208ENST00000598886 C6orf48Q9UBA6 75 aa9.53□□□□□ -0.88
SMG9-208ENST00000598886 MT-ND6P03923 174 aa9.52□□□□□ -0.89
SMG9-208ENST00000598886 UNQ6190/PRO20217Q6UXQ8 127 aa9.52□□□□□ -0.89
SMG9-208ENST00000598886 TMA7Q9Y2S6 64 aaKnown RBP9.52□□□□□ -0.89
SMG9-208ENST00000598886 IGLV7-43P04211 117 aa9.51□□□□□ -0.89
SMG9-208ENST00000598886 C1orf137Q5JT78 98 aa9.51□□□□□ -0.89
SMG9-208ENST00000598886 IFITM10A6NMD0 228 aa9.5□□□□□ -0.89
SMG9-208ENST00000598886 NDUFA1O15239 70 aa9.5□□□□□ -0.89
SMG9-208ENST00000598886 RAB5BP61020 215 aa9.5□□□□□ -0.89
SMG9-208ENST00000598886 PYGO1Q9Y3Y4 419 aa9.5□□□□□ -0.89
SMG9-208ENST00000598886 IGLV4-3A0A075B6K6 122 aa9.49□□□□□ -0.89
SMG9-208ENST00000598886 A0A087WZ39 114 aa9.49□□□□□ -0.89
SMG9-208ENST00000598886 PPBPP02775 128 aa9.49□□□□□ -0.89
SMG9-208ENST00000598886 LINC00242Q5T6M2 205 aa9.49□□□□□ -0.89
SMG9-208ENST00000598886 GNB1LQ9BYB4 327 aa9.49□□□□□ -0.89
SMG9-208ENST00000598886 PRSS47A8MTI9 375 aa9.48□□□□□ -0.89
SMG9-208ENST00000598886 S100A8P05109 93 aa9.48□□□□□ -0.89
SMG9-208ENST00000598886 KRTAP1-4P0C5Y4 121 aa9.48□□□□□ -0.89
SMG9-208ENST00000598886 H0Y9J4 135 aa9.47□□□□□ -0.89
SMG9-208ENST00000598886 TRGC2P03986 189 aa9.47□□□□□ -0.89
SMG9-208ENST00000598886 TMEM136Q6ZRR5 245 aa9.47□□□□□ -0.89
SMG9-208ENST00000598886 LINC00173Q6ZV60 143 aa9.47□□□□□ -0.89
SMG9-208ENST00000598886 ORMDL3Q8N138 153 aa9.47□□□□□ -0.89
SMG9-208ENST00000598886 FAM19A5Q7Z5A7 132 aaPredicted RBP9.46□□□□□ -0.9
SMG9-208ENST00000598886 PRR26Q8N8Z3 221 aa9.46□□□□□ -0.9
SMG9-208ENST00000598886 DIRC1Q969H9 104 aa9.46□□□□□ -0.9
SMG9-208ENST00000598886 UBE2D1P51668 147 aa9.45□□□□□ -0.9
SMG9-208ENST00000598886 C9orf129Q5T035 196 aaKnown RBP9.45□□□□□ -0.9
SMG9-208ENST00000598886 PRELID3AQ96N28 172 aa9.45□□□□□ -0.9
SMG9-208ENST00000598886 TRAPPC1Q9Y5R8 145 aa9.45□□□□□ -0.9
SMG9-208ENST00000598886 IFI27P40305 119 aaPredicted RBP9.44□□□□□ -0.9
SMG9-208ENST00000598886 C2orf82Q6UX34 121 aa9.44□□□□□ -0.9
SMG9-208ENST00000598886 MRPL18Q9H0U6 180 aaKnown RBP9.44□□□□□ -0.9
SMG9-208ENST00000598886 TRBV30A0A0K0K1B3 111 aa9.43□□□□□ -0.9
SMG9-208ENST00000598886 HIST1H2BKO60814 126 aa9.43□□□□□ -0.9
SMG9-208ENST00000598886 HIST1H2BJP06899 126 aa9.43□□□□□ -0.9
SMG9-208ENST00000598886 HIST1H2BOP23527 126 aa9.43□□□□□ -0.9
SMG9-208ENST00000598886 HIST1H2BBP33778 126 aa9.43□□□□□ -0.9
SMG9-208ENST00000598886 HIST1H2BDP58876 126 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms