RNA–Protein interactions for RNA: ENST00000598444.1

ARHGEF1-215, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 425 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-215ENST00000598444 RPL18AQ02543 176 aaKnown RBP5.5□□□□□ -1.53
ARHGEF1-215ENST00000598444 SPAG11BQ08648 103 aa5.5□□□□□ -1.53
ARHGEF1-215ENST00000598444 SPINK6Q6UWN8 80 aa5.5□□□□□ -1.53
ARHGEF1-215ENST00000598444 TMEM136Q6ZRR5 245 aa5.5□□□□□ -1.53
ARHGEF1-215ENST00000598444 FAM104AQ969W3 186 aa5.5□□□□□ -1.53
ARHGEF1-215ENST00000598444 SPANXA1Q9NS26 97 aa5.5□□□□□ -1.53
ARHGEF1-215ENST00000598444 IGHV3OR16-9A0A0B4J2B5 98 aa5.49□□□□□ -1.53
ARHGEF1-215ENST00000598444 IFITM10A6NMD0 228 aa5.49□□□□□ -1.53
ARHGEF1-215ENST00000598444 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.49□□□□□ -1.53
ARHGEF1-215ENST00000598444 RAB5AP20339 215 aa5.49□□□□□ -1.53
ARHGEF1-215ENST00000598444 SRSF9Q13242 221 aaKnown RBP eCLIP5.49□□□□□ -1.53
ARHGEF1-215ENST00000598444 RNF151Q2KHN1 245 aa5.49□□□□□ -1.53
ARHGEF1-215ENST00000598444 C9orf116Q5BN46 136 aaPredicted RBP5.49□□□□□ -1.53
ARHGEF1-215ENST00000598444 REG3GQ6UW15 175 aa5.49□□□□□ -1.53
ARHGEF1-215ENST00000598444 ORMDL3Q8N138 153 aa5.49□□□□□ -1.53
ARHGEF1-215ENST00000598444 OR10D4PQ8NGN7 298 aa5.49□□□□□ -1.53
ARHGEF1-215ENST00000598444 ORAOV1Q8WV07 137 aa5.49□□□□□ -1.53
ARHGEF1-215ENST00000598444 PRELID3AQ96N28 172 aa5.49□□□□□ -1.53
ARHGEF1-215ENST00000598444 ATP5L2Q7Z4Y8 100 aa5.48□□□□□ -1.53
ARHGEF1-215ENST00000598444 LOC389332A0A1B0GUA5 103 aa5.47□□□□□ -1.53
ARHGEF1-215ENST00000598444 F8WDY8 70 aa5.47□□□□□ -1.53
ARHGEF1-215ENST00000598444 NDUFA1O15239 70 aa5.47□□□□□ -1.53
ARHGEF1-215ENST00000598444 MT-ND6P03923 174 aa5.47□□□□□ -1.53
ARHGEF1-215ENST00000598444 IFI27P40305 119 aaPredicted RBP5.47□□□□□ -1.53
ARHGEF1-215ENST00000598444 KRTAP10-8P60410 259 aa5.47□□□□□ -1.53
ARHGEF1-215ENST00000598444 ODF1Q14990 250 aa5.47□□□□□ -1.53
ARHGEF1-215ENST00000598444 C10orf25Q5T742 122 aa5.47□□□□□ -1.53
ARHGEF1-215ENST00000598444 UNQ6190/PRO20217Q6UXQ8 127 aa5.47□□□□□ -1.53
ARHGEF1-215ENST00000598444 IMMP2LQ96T52 175 aa5.47□□□□□ -1.53
ARHGEF1-215ENST00000598444 MRPL35Q9NZE8 188 aaKnown RBP5.47□□□□□ -1.53
ARHGEF1-215ENST00000598444 PSORS1C2Q9UIG4 136 aa5.47□□□□□ -1.53
ARHGEF1-215ENST00000598444 TGIF2-C20orf24A0A0A6YYL0 155 aa5.46□□□□□ -1.54
ARHGEF1-215ENST00000598444 PHF5AQ7RTV0 110 aaKnown RBP5.46□□□□□ -1.54
ARHGEF1-215ENST00000598444 TMEM141Q96I45 108 aa5.46□□□□□ -1.54
ARHGEF1-215ENST00000598444 MAP1LC3AQ9H492 121 aa5.46□□□□□ -1.54
ARHGEF1-215ENST00000598444 PYGO1Q9Y3Y4 419 aa5.46□□□□□ -1.54
ARHGEF1-215ENST00000598444 IGLV4-3A0A075B6K6 122 aa5.45□□□□□ -1.54
ARHGEF1-215ENST00000598444 A0A087WZ39 114 aa5.45□□□□□ -1.54
ARHGEF1-215ENST00000598444 PRSS47A8MTI9 375 aa5.45□□□□□ -1.54
ARHGEF1-215ENST00000598444 MT-ND4LP03901 98 aa5.45□□□□□ -1.54
ARHGEF1-215ENST00000598444 PNRC1Q12796 327 aaPredicted RBP5.45□□□□□ -1.54
ARHGEF1-215ENST00000598444 C1orf137Q5JT78 98 aa5.45□□□□□ -1.54
ARHGEF1-215ENST00000598444 LINC00242Q5T6M2 205 aa5.45□□□□□ -1.54
ARHGEF1-215ENST00000598444 ANAPC16Q96DE5 110 aa5.45□□□□□ -1.54
ARHGEF1-215ENST00000598444 LAMTOR2Q9Y2Q5 125 aa5.45□□□□□ -1.54
ARHGEF1-215ENST00000598444 LRP2P98164 4655 aa5.44□□□□□ -1.54
ARHGEF1-215ENST00000598444 TLX1NBP0CAT3 122 aa5.44□□□□□ -1.54
ARHGEF1-215ENST00000598444 RAB14P61106 215 aa5.44□□□□□ -1.54
ARHGEF1-215ENST00000598444 KIAA0087Q14695 138 aa5.44□□□□□ -1.54
ARHGEF1-215ENST00000598444 GAGE2EQ4V326 116 aa5.44□□□□□ -1.54
ARHGEF1-215ENST00000598444 TEX43Q6ZNM6 134 aa5.44□□□□□ -1.54
ARHGEF1-215ENST00000598444 Q8N8P6 123 aa5.44□□□□□ -1.54
ARHGEF1-215ENST00000598444 C6orf48Q9UBA6 75 aa5.44□□□□□ -1.54
ARHGEF1-215ENST00000598444 GAGE2DQ9UEU5 116 aa5.44□□□□□ -1.54
ARHGEF1-215ENST00000598444 FAM168BA1KXE4 195 aa5.43□□□□□ -1.54
ARHGEF1-215ENST00000598444 UBE2D1P51668 147 aa5.43□□□□□ -1.54
ARHGEF1-215ENST00000598444 ZC2HC1BQ5TFG8 222 aa5.43□□□□□ -1.54
ARHGEF1-215ENST00000598444 C2orf82Q6UX34 121 aa5.43□□□□□ -1.54
ARHGEF1-215ENST00000598444 C2orf66Q6UXQ4 117 aa5.43□□□□□ -1.54
ARHGEF1-215ENST00000598444 C2orf88Q9BSF0 95 aa5.43□□□□□ -1.54
ARHGEF1-215ENST00000598444 VCX2Q9H322 139 aa5.43□□□□□ -1.54
ARHGEF1-215ENST00000598444 CYSLTR1Q9Y271 337 aa5.43□□□□□ -1.54
ARHGEF1-215ENST00000598444 TRBV30A0A0K0K1B3 111 aa5.42□□□□□ -1.54
ARHGEF1-215ENST00000598444 ORMDL2Q53FV1 153 aa5.42□□□□□ -1.54
ARHGEF1-215ENST00000598444 Q6ZN92 141 aa5.42□□□□□ -1.54
ARHGEF1-215ENST00000598444 FAM19A5Q7Z5A7 132 aaPredicted RBP5.42□□□□□ -1.54
ARHGEF1-215ENST00000598444 LINC01561Q8N1V8 128 aa5.42□□□□□ -1.54
ARHGEF1-215ENST00000598444 CTDSP1Q9GZU7 261 aa5.42□□□□□ -1.54
ARHGEF1-215ENST00000598444 IGLV7-43P04211 117 aa5.41□□□□□ -1.54
ARHGEF1-215ENST00000598444 LINC00173Q6ZV60 143 aa5.41□□□□□ -1.54
ARHGEF1-215ENST00000598444 PACRGQ96M98 296 aaPredicted RBP5.41□□□□□ -1.54
ARHGEF1-215ENST00000598444 AMELXQ99217 191 aa5.41□□□□□ -1.54
ARHGEF1-215ENST00000598444 NXT2Q9NPJ8 142 aaKnown RBP5.41□□□□□ -1.54
ARHGEF1-215ENST00000598444 IGIPA6NJ69 53 aa5.4□□□□□ -1.54
ARHGEF1-215ENST00000598444 NDUFC2-KCTD14E9PQ53 114 aa5.4□□□□□ -1.54
ARHGEF1-215ENST00000598444 K7EMI3 77 aa5.4□□□□□ -1.54
ARHGEF1-215ENST00000598444 PRSS2P07478 247 aa5.4□□□□□ -1.54
ARHGEF1-215ENST00000598444 C6orf226Q5I0X4 101 aa5.4□□□□□ -1.54
ARHGEF1-215ENST00000598444 KRTAP11-1Q8IUC1 163 aa5.4□□□□□ -1.54
ARHGEF1-215ENST00000598444 KRTAP7-1Q8IUC3 87 aa5.4□□□□□ -1.54
ARHGEF1-215ENST00000598444 DIRC1Q969H9 104 aa5.4□□□□□ -1.54
ARHGEF1-215ENST00000598444 TOMM7Q9P0U1 55 aa5.4□□□□□ -1.54
ARHGEF1-215ENST00000598444 M0QXV9 152 aa5.39□□□□□ -1.55
ARHGEF1-215ENST00000598444 NPSP0C0P6 89 aa5.39□□□□□ -1.55
ARHGEF1-215ENST00000598444 G0S2P27469 103 aa5.39□□□□□ -1.55
ARHGEF1-215ENST00000598444 CKS1BP61024 79 aa5.39□□□□□ -1.55
ARHGEF1-215ENST00000598444 UBE2BP63146 152 aa5.39□□□□□ -1.55
ARHGEF1-215ENST00000598444 KIAA1644Q3SXP7 199 aa5.39□□□□□ -1.55
ARHGEF1-215ENST00000598444 PAPPA-AS1Q5QFB9 102 aa5.39□□□□□ -1.55
ARHGEF1-215ENST00000598444 HERVK_113P63121 156 aa5.38□□□□□ -1.55
ARHGEF1-215ENST00000598444 SEC11AP67812 179 aa5.38□□□□□ -1.55
ARHGEF1-215ENST00000598444 CLLU1Q5K131 121 aa5.38□□□□□ -1.55
ARHGEF1-215ENST00000598444 C9orf129Q5T035 196 aaKnown RBP5.38□□□□□ -1.55
ARHGEF1-215ENST00000598444 FAM19A3Q7Z5A8 133 aa5.38□□□□□ -1.55
ARHGEF1-215ENST00000598444 LINC00469Q8N7U9 141 aa5.38□□□□□ -1.55
ARHGEF1-215ENST00000598444 ALKBH7Q9BT30 221 aaPredicted RBP5.38□□□□□ -1.55
ARHGEF1-215ENST00000598444 CDKN2A-AS1Q9UH64 79 aa5.38□□□□□ -1.55
ARHGEF1-215ENST00000598444 H0Y9J4 135 aa5.37□□□□□ -1.55
ARHGEF1-215ENST00000598444 Q8IZM0 81 aa5.37□□□□□ -1.55
ARHGEF1-215ENST00000598444 PRR26Q8N8Z3 221 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 291.6 ms