RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 OR5A1Q8NGJ0 315 aa7.56□□□□□ -1.2
SOX2-OT-228ENST00000597828 CCL25O15444 150 aa7.55□□□□□ -1.2
SOX2-OT-228ENST00000597828 TSHBP01222 138 aa7.55□□□□□ -1.2
SOX2-OT-228ENST00000597828 POLR2KP53803 58 aaKnown RBP7.55□□□□□ -1.2
SOX2-OT-228ENST00000597828 NRACQ8N912 160 aa7.55□□□□□ -1.2
SOX2-OT-228ENST00000597828 TMEM18Q96B42 140 aa7.55□□□□□ -1.2
SOX2-OT-228ENST00000597828 LINC00959A0A1B0GUT2 108 aa7.54□□□□□ -1.2
SOX2-OT-228ENST00000597828 H7C423 109 aa7.54□□□□□ -1.2
SOX2-OT-228ENST00000597828 ATP6V1G1O75348 118 aa7.54□□□□□ -1.2
SOX2-OT-228ENST00000597828 ESDP10768 282 aa7.54□□□□□ -1.2
SOX2-OT-228ENST00000597828 G0S2P27469 103 aa7.54□□□□□ -1.2
SOX2-OT-228ENST00000597828 LINC01600Q96MT4 127 aa7.54□□□□□ -1.2
SOX2-OT-228ENST00000597828 TRBV27A0A0K0K1C4 114 aa7.53□□□□□ -1.2
SOX2-OT-228ENST00000597828 NPYP01303 97 aa7.53□□□□□ -1.2
SOX2-OT-228ENST00000597828 ZNF25P17030 456 aaPredicted RBP7.53□□□□□ -1.2
SOX2-OT-228ENST00000597828 CARD19Q96LW7 228 aa7.53□□□□□ -1.2
SOX2-OT-228ENST00000597828 NXT2Q9NPJ8 142 aaKnown RBP7.53□□□□□ -1.2
SOX2-OT-228ENST00000597828 IGHV1-58A0A0C4DH39 117 aa7.52□□□□□ -1.21
SOX2-OT-228ENST00000597828 RPL32P62910 135 aaKnown RBP7.52□□□□□ -1.21
SOX2-OT-228ENST00000597828 TMEM101Q96IK0 257 aa7.52□□□□□ -1.21
SOX2-OT-228ENST00000597828 SMIM2Q9BVW6 85 aa7.52□□□□□ -1.21
SOX2-OT-228ENST00000597828 SCO1O75880 301 aa7.51□□□□□ -1.21
SOX2-OT-228ENST00000597828 RAB5BP61020 215 aa7.51□□□□□ -1.21
SOX2-OT-228ENST00000597828 RNASE13Q5GAN3 156 aaKnown RBP7.51□□□□□ -1.21
SOX2-OT-228ENST00000597828 Q8N8P6 123 aa7.51□□□□□ -1.21
SOX2-OT-228ENST00000597828 ALKBH7Q9BT30 221 aaPredicted RBP7.51□□□□□ -1.21
SOX2-OT-228ENST00000597828 A0A0J9YXV3 536 aa7.5□□□□□ -1.21
SOX2-OT-228ENST00000597828 PRSS47A8MTI9 375 aa7.5□□□□□ -1.21
SOX2-OT-228ENST00000597828 K7EMI3 77 aa7.5□□□□□ -1.21
SOX2-OT-228ENST00000597828 ORMDL2Q53FV1 153 aa7.5□□□□□ -1.21
SOX2-OT-228ENST00000597828 FA2HQ7L5A8 372 aa7.5□□□□□ -1.21
SOX2-OT-228ENST00000597828 YPEL4Q96NS1 127 aa7.5□□□□□ -1.21
SOX2-OT-228ENST00000597828 CDC42SE2Q9NRR3 84 aa7.5□□□□□ -1.21
SOX2-OT-228ENST00000597828 COLCA2A8K830 154 aa7.49□□□□□ -1.21
SOX2-OT-228ENST00000597828 SYCNQ0VAF6 134 aa7.49□□□□□ -1.21
SOX2-OT-228ENST00000597828 SS18Q15532 418 aa7.49□□□□□ -1.21
SOX2-OT-228ENST00000597828 IGLV4-69A0A075B6H9 119 aa7.48□□□□□ -1.21
SOX2-OT-228ENST00000597828 ZNF561-AS1K7EIQ3 104 aa7.48□□□□□ -1.21
SOX2-OT-228ENST00000597828 TRGC2P03986 189 aa7.48□□□□□ -1.21
SOX2-OT-228ENST00000597828 IFI27P40305 119 aaPredicted RBP7.48□□□□□ -1.21
SOX2-OT-228ENST00000597828 PTTG1IPP53801 180 aa7.48□□□□□ -1.21
SOX2-OT-228ENST00000597828 KRTAP10-8P60410 259 aa7.48□□□□□ -1.21
SOX2-OT-228ENST00000597828 GAGE2BQ13066 116 aa7.48□□□□□ -1.21
SOX2-OT-228ENST00000597828 CD164L2Q6UWJ8 174 aa7.48□□□□□ -1.21
SOX2-OT-228ENST00000597828 SPINK6Q6UWN8 80 aa7.48□□□□□ -1.21
SOX2-OT-228ENST00000597828 MRPL52Q86TS9 123 aaKnown RBP7.48□□□□□ -1.21
SOX2-OT-228ENST00000597828 ZNF664Q8N3J9 261 aa7.48□□□□□ -1.21
SOX2-OT-228ENST00000597828 LPAP08519 4548 aa7.48□□□□□ -1.21
SOX2-OT-228ENST00000597828 RNF213Q63HN8 5207 aa7.48□□□□□ -1.21
SOX2-OT-228ENST00000597828 A0A1W2PNN7 141 aa7.47□□□□□ -1.21
SOX2-OT-228ENST00000597828 SRSF9Q13242 221 aaKnown RBP eCLIP7.47□□□□□ -1.21
SOX2-OT-228ENST00000597828 BAGE3Q86Y29 109 aa7.47□□□□□ -1.21
SOX2-OT-228ENST00000597828 LINC00474Q9P2X8 69 aa7.47□□□□□ -1.21
SOX2-OT-228ENST00000597828 LINC01549A6NIU2 74 aa7.46□□□□□ -1.22
SOX2-OT-228ENST00000597828 LINC00614P0C842 121 aa7.46□□□□□ -1.22
SOX2-OT-228ENST00000597828 REG3GQ6UW15 175 aa7.46□□□□□ -1.22
SOX2-OT-228ENST00000597828 Q6ZRP5 223 aa7.46□□□□□ -1.22
SOX2-OT-228ENST00000597828 Q6ZUT4 128 aa7.46□□□□□ -1.22
SOX2-OT-228ENST00000597828 CYSLTR1Q9Y271 337 aa7.46□□□□□ -1.22
SOX2-OT-228ENST00000597828 UBE2D4Q9Y2X8 147 aa7.46□□□□□ -1.22
SOX2-OT-228ENST00000597828 LOC107984640A0A0U1RRK4 108 aa7.45□□□□□ -1.22
SOX2-OT-228ENST00000597828 PKIGQ9Y2B9 76 aa7.45□□□□□ -1.22
SOX2-OT-228ENST00000597828 TRAV13-1A0A0B4J241 112 aa7.44□□□□□ -1.22
SOX2-OT-228ENST00000597828 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.44□□□□□ -1.22
SOX2-OT-228ENST00000597828 COX7A2LO14548 114 aa7.44□□□□□ -1.22
SOX2-OT-228ENST00000597828 MALP21145 153 aa7.44□□□□□ -1.22
SOX2-OT-228ENST00000597828 RPL18AQ02543 176 aaKnown RBP7.44□□□□□ -1.22
SOX2-OT-228ENST00000597828 C5orf38Q86SI9 138 aa7.44□□□□□ -1.22
SOX2-OT-228ENST00000597828 C18orf32Q8TCD1 76 aa7.44□□□□□ -1.22
SOX2-OT-228ENST00000597828 CAMK2N2Q96S95 79 aa7.44□□□□□ -1.22
SOX2-OT-228ENST00000597828 C1orf196B1AJZ1 125 aa7.43□□□□□ -1.22
SOX2-OT-228ENST00000597828 PAPPA-AS1Q5QFB9 102 aa7.43□□□□□ -1.22
SOX2-OT-228ENST00000597828 C2orf66Q6UXQ4 117 aa7.43□□□□□ -1.22
SOX2-OT-228ENST00000597828 Q6ZN92 141 aa7.43□□□□□ -1.22
SOX2-OT-228ENST00000597828 PHF5AQ7RTV0 110 aaKnown RBP7.43□□□□□ -1.22
SOX2-OT-228ENST00000597828 OPRPNQ99935 248 aaPredicted RBP7.43□□□□□ -1.22
SOX2-OT-228ENST00000597828 SPANXA1Q9NS26 97 aa7.43□□□□□ -1.22
SOX2-OT-228ENST00000597828 PSORS1C2Q9UIG4 136 aa7.43□□□□□ -1.22
SOX2-OT-228ENST00000597828 APOMO95445 188 aa7.42□□□□□ -1.22
SOX2-OT-228ENST00000597828 C9orf116Q5BN46 136 aaPredicted RBP7.42□□□□□ -1.22
SOX2-OT-228ENST00000597828 CHCHD1Q96BP2 118 aaKnown RBP7.42□□□□□ -1.22
SOX2-OT-228ENST00000597828 SCGB3A1Q96QR1 104 aa7.42□□□□□ -1.22
SOX2-OT-228ENST00000597828 TIMM21Q9BVV7 248 aa7.42□□□□□ -1.22
SOX2-OT-228ENST00000597828 CSDC2Q9Y534 153 aaKnown RBP7.42□□□□□ -1.22
SOX2-OT-228ENST00000597828 HSBP1O75506 76 aa7.41□□□□□ -1.22
SOX2-OT-228ENST00000597828 RPL39P62891 51 aaKnown RBP7.41□□□□□ -1.22
SOX2-OT-228ENST00000597828 SPAG11BQ08648 103 aa7.41□□□□□ -1.22
SOX2-OT-228ENST00000597828 FAM104AQ969W3 186 aa7.41□□□□□ -1.22
SOX2-OT-228ENST00000597828 VCX2Q9H322 139 aa7.41□□□□□ -1.22
SOX2-OT-228ENST00000597828 TOMM6Q96B49 74 aa7.4□□□□□ -1.22
SOX2-OT-228ENST00000597828 TMEM141Q96I45 108 aa7.4□□□□□ -1.22
SOX2-OT-228ENST00000597828 C2orf48Q96LS8 159 aa7.4□□□□□ -1.22
SOX2-OT-228ENST00000597828 C2orf88Q9BSF0 95 aa7.4□□□□□ -1.22
SOX2-OT-228ENST00000597828 PYGO1Q9Y3Y4 419 aa7.4□□□□□ -1.22
SOX2-OT-228ENST00000597828 FAM168BA1KXE4 195 aa7.39□□□□□ -1.23
SOX2-OT-228ENST00000597828 LINC01546A6NGU7 62 aa7.39□□□□□ -1.23
SOX2-OT-228ENST00000597828 HBDP02042 147 aa7.39□□□□□ -1.23
SOX2-OT-228ENST00000597828 MRPS36P82909 103 aaKnown RBP7.39□□□□□ -1.23
SOX2-OT-228ENST00000597828 C1orf137Q5JT78 98 aa7.39□□□□□ -1.23
SOX2-OT-228ENST00000597828 TEX43Q6ZNM6 134 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms