RNA–Protein interactions for RNA: ENST00000596940.5

C19orf54-206, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-206ENST00000596940 SRSF9Q13242 221 aaKnown RBP eCLIP8.72□□□□□ -1.01
C19orf54-206ENST00000596940 MRPL54Q6P161 138 aaKnown RBP8.72□□□□□ -1.01
C19orf54-206ENST00000596940 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.71□□□□□ -1.02
C19orf54-206ENST00000596940 RPL39P62891 51 aaKnown RBP8.71□□□□□ -1.02
C19orf54-206ENST00000596940 RPL18AQ02543 176 aaKnown RBP8.71□□□□□ -1.02
C19orf54-206ENST00000596940 ATP5L2Q7Z4Y8 100 aa8.71□□□□□ -1.02
C19orf54-206ENST00000596940 ORMDL3Q8N138 153 aa8.71□□□□□ -1.02
C19orf54-206ENST00000596940 MRPL35Q9NZE8 188 aaKnown RBP8.71□□□□□ -1.02
C19orf54-206ENST00000596940 IGHV3OR16-9A0A0B4J2B5 98 aa8.7□□□□□ -1.02
C19orf54-206ENST00000596940 A0A1B0GXF2 115 aa8.7□□□□□ -1.02
C19orf54-206ENST00000596940 IFITM10A6NMD0 228 aa8.7□□□□□ -1.02
C19orf54-206ENST00000596940 NDUFA1O15239 70 aa8.7□□□□□ -1.02
C19orf54-206ENST00000596940 MT-ND6P03923 174 aa8.7□□□□□ -1.02
C19orf54-206ENST00000596940 IFI27P40305 119 aaPredicted RBP8.7□□□□□ -1.02
C19orf54-206ENST00000596940 SRSF3P84103 164 aaKnown RBP8.7□□□□□ -1.02
C19orf54-206ENST00000596940 C9orf116Q5BN46 136 aaPredicted RBP8.7□□□□□ -1.02
C19orf54-206ENST00000596940 ORAOV1Q8WV07 137 aa8.7□□□□□ -1.02
C19orf54-206ENST00000596940 TGIF2-C20orf24A0A0A6YYL0 155 aa8.69□□□□□ -1.02
C19orf54-206ENST00000596940 A0A1W2PNN7 141 aa8.69□□□□□ -1.02
C19orf54-206ENST00000596940 NPYP01303 97 aa8.69□□□□□ -1.02
C19orf54-206ENST00000596940 TMEM136Q6ZRR5 245 aa8.69□□□□□ -1.02
C19orf54-206ENST00000596940 KRTAP10-8P60410 259 aa8.68□□□□□ -1.02
C19orf54-206ENST00000596940 PRELID3AQ96N28 172 aa8.68□□□□□ -1.02
C19orf54-206ENST00000596940 OPRPNQ99935 248 aaPredicted RBP8.68□□□□□ -1.02
C19orf54-206ENST00000596940 LAMTOR2Q9Y2Q5 125 aa8.68□□□□□ -1.02
C19orf54-206ENST00000596940 PYGO1Q9Y3Y4 419 aa8.68□□□□□ -1.02
C19orf54-206ENST00000596940 TNXBP22105 4242 aa8.66□□□□□ -1.02
C19orf54-206ENST00000596940 A0A1B0GVG6 124 aa8.66□□□□□ -1.02
C19orf54-206ENST00000596940 FAM104AQ969W3 186 aa8.66□□□□□ -1.02
C19orf54-206ENST00000596940 PSORS1C2Q9UIG4 136 aa8.66□□□□□ -1.02
C19orf54-206ENST00000596940 A0A087WZ39 114 aa8.65□□□□□ -1.02
C19orf54-206ENST00000596940 PRSS47A8MTI9 375 aa8.65□□□□□ -1.02
C19orf54-206ENST00000596940 MT-ND4LP03901 98 aa8.65□□□□□ -1.02
C19orf54-206ENST00000596940 TLX1NBP0CAT3 122 aa8.65□□□□□ -1.02
C19orf54-206ENST00000596940 PNRC1Q12796 327 aaPredicted RBP8.65□□□□□ -1.02
C19orf54-206ENST00000596940 C1orf137Q5JT78 98 aa8.64□□□□□ -1.03
C19orf54-206ENST00000596940 TEX43Q6ZNM6 134 aa8.64□□□□□ -1.03
C19orf54-206ENST00000596940 ANAPC16Q96DE5 110 aa8.64□□□□□ -1.03
C19orf54-206ENST00000596940 TMEM141Q96I45 108 aa8.64□□□□□ -1.03
C19orf54-206ENST00000596940 C2orf88Q9BSF0 95 aa8.64□□□□□ -1.03
C19orf54-206ENST00000596940 MAP1LC3AQ9H492 121 aa8.64□□□□□ -1.03
C19orf54-206ENST00000596940 K7EMI3 77 aa8.63□□□□□ -1.03
C19orf54-206ENST00000596940 RAB14P61106 215 aa8.63□□□□□ -1.03
C19orf54-206ENST00000596940 UNQ6190/PRO20217Q6UXQ8 127 aa8.63□□□□□ -1.03
C19orf54-206ENST00000596940 Q6ZN92 141 aa8.63□□□□□ -1.03
C19orf54-206ENST00000596940 PHF5AQ7RTV0 110 aaKnown RBP8.63□□□□□ -1.03
C19orf54-206ENST00000596940 LINC01561Q8N1V8 128 aa8.63□□□□□ -1.03
C19orf54-206ENST00000596940 CYSLTR1Q9Y271 337 aa8.63□□□□□ -1.03
C19orf54-206ENST00000596940 IGLV4-3A0A075B6K6 122 aa8.62□□□□□ -1.03
C19orf54-206ENST00000596940 TRBV30A0A0K0K1B3 111 aa8.62□□□□□ -1.03
C19orf54-206ENST00000596940 NPSP0C0P6 89 aa8.62□□□□□ -1.03
C19orf54-206ENST00000596940 G0S2P27469 103 aa8.62□□□□□ -1.03
C19orf54-206ENST00000596940 ORMDL2Q53FV1 153 aa8.62□□□□□ -1.03
C19orf54-206ENST00000596940 LINC00242Q5T6M2 205 aa8.62□□□□□ -1.03
C19orf54-206ENST00000596940 DIRC1Q969H9 104 aa8.62□□□□□ -1.03
C19orf54-206ENST00000596940 PACRGQ96M98 296 aaPredicted RBP8.62□□□□□ -1.03
C19orf54-206ENST00000596940 LOC389332A0A1B0GUA5 103 aa8.61□□□□□ -1.03
C19orf54-206ENST00000596940 GAGE2EQ4V326 116 aa8.61□□□□□ -1.03
C19orf54-206ENST00000596940 C10orf25Q5T742 122 aa8.61□□□□□ -1.03
C19orf54-206ENST00000596940 Q8N8P6 123 aa8.61□□□□□ -1.03
C19orf54-206ENST00000596940 VCX2Q9H322 139 aa8.61□□□□□ -1.03
C19orf54-206ENST00000596940 C6orf48Q9UBA6 75 aa8.61□□□□□ -1.03
C19orf54-206ENST00000596940 GAGE2DQ9UEU5 116 aa8.61□□□□□ -1.03
C19orf54-206ENST00000596940 IGLV7-43P04211 117 aa8.6□□□□□ -1.03
C19orf54-206ENST00000596940 PAPPA-AS1Q5QFB9 102 aa8.6□□□□□ -1.03
C19orf54-206ENST00000596940 C2orf66Q6UXQ4 117 aa8.6□□□□□ -1.03
C19orf54-206ENST00000596940 LRP2P98164 4655 aa8.59□□□□□ -1.03
C19orf54-206ENST00000596940 NDUFC2-KCTD14E9PQ53 114 aa8.59□□□□□ -1.03
C19orf54-206ENST00000596940 PRSS2P07478 247 aa8.59□□□□□ -1.03
C19orf54-206ENST00000596940 UBE2D1P51668 147 aa8.59□□□□□ -1.03
C19orf54-206ENST00000596940 SEC11AP67812 179 aa8.59□□□□□ -1.03
C19orf54-206ENST00000596940 KIAA0087Q14695 138 aa8.59□□□□□ -1.03
C19orf54-206ENST00000596940 CKS1BP61024 79 aa8.58□□□□□ -1.04
C19orf54-206ENST00000596940 UBE2BP63146 152 aa8.58□□□□□ -1.04
C19orf54-206ENST00000596940 FAM19A5Q7Z5A7 132 aaPredicted RBP8.58□□□□□ -1.04
C19orf54-206ENST00000596940 NXT2Q9NPJ8 142 aaKnown RBP8.58□□□□□ -1.04
C19orf54-206ENST00000596940 FAM168BA1KXE4 195 aa8.57□□□□□ -1.04
C19orf54-206ENST00000596940 C6orf226Q5I0X4 101 aa8.57□□□□□ -1.04
C19orf54-206ENST00000596940 CTDSP1Q9GZU7 261 aa8.57□□□□□ -1.04
C19orf54-206ENST00000596940 M0QXV9 152 aa8.56□□□□□ -1.04
C19orf54-206ENST00000596940 C2orf82Q6UX34 121 aa8.56□□□□□ -1.04
C19orf54-206ENST00000596940 AMELXQ99217 191 aa8.56□□□□□ -1.04
C19orf54-206ENST00000596940 H0Y9J4 135 aa8.55□□□□□ -1.04
C19orf54-206ENST00000596940 HERVK_113P63121 156 aa8.55□□□□□ -1.04
C19orf54-206ENST00000596940 ODF1Q14990 250 aa8.55□□□□□ -1.04
C19orf54-206ENST00000596940 RNF213Q63HN8 5207 aa8.55□□□□□ -1.04
C19orf54-206ENST00000596940 IGIPA6NJ69 53 aa8.54□□□□□ -1.04
C19orf54-206ENST00000596940 FAM19A3Q7Z5A8 133 aa8.54□□□□□ -1.04
C19orf54-206ENST00000596940 Q8IZM0 81 aa8.54□□□□□ -1.04
C19orf54-206ENST00000596940 ALKBH7Q9BT30 221 aaPredicted RBP8.54□□□□□ -1.04
C19orf54-206ENST00000596940 GEMIN7Q9H840 131 aaKnown RBP8.54□□□□□ -1.04
C19orf54-206ENST00000596940 TOMM7Q9P0U1 55 aa8.54□□□□□ -1.04
C19orf54-206ENST00000596940 IGLV1-50A0A075B6I6 118 aa8.53□□□□□ -1.04
C19orf54-206ENST00000596940 LINC01549A6NIU2 74 aa8.53□□□□□ -1.04
C19orf54-206ENST00000596940 TIMM17AQ99595 171 aa8.53□□□□□ -1.04
C19orf54-206ENST00000596940 LBHQ53QV2 105 aaPredicted RBP8.52□□□□□ -1.05
C19orf54-206ENST00000596940 LINC00173Q6ZV60 143 aa8.52□□□□□ -1.05
C19orf54-206ENST00000596940 CXCL5P42830 114 aa8.51□□□□□ -1.05
C19orf54-206ENST00000596940 C9orf129Q5T035 196 aaKnown RBP8.51□□□□□ -1.05
C19orf54-206ENST00000596940 ZC2HC1BQ5TFG8 222 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms