RNA–Protein interactions for RNA: ENST00000596624.1

PNKP-208, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-208ENST00000596624 SPANXA1Q9NS26 97 aa6.41□□□□□ -1.38
PNKP-208ENST00000596624 NAT8BQ9UHF3 227 aa6.41□□□□□ -1.38
PNKP-208ENST00000596624 H0Y9J4 135 aa6.4□□□□□ -1.38
PNKP-208ENST00000596624 KRTAP1-4P0C5Y4 121 aa6.4□□□□□ -1.38
PNKP-208ENST00000596624 KIAA0087Q14695 138 aa6.4□□□□□ -1.38
PNKP-208ENST00000596624 FAM74A3Q4VXF1 159 aa6.4□□□□□ -1.38
PNKP-208ENST00000596624 IGLV1-50A0A075B6I6 118 aa6.39□□□□□ -1.39
PNKP-208ENST00000596624 A0A1B0GW15 77 aa6.39□□□□□ -1.39
PNKP-208ENST00000596624 RPL23P62829 140 aaKnown RBP6.39□□□□□ -1.39
PNKP-208ENST00000596624 RPL18AQ02543 176 aaKnown RBP6.39□□□□□ -1.39
PNKP-208ENST00000596624 C10orf25Q5T742 122 aa6.39□□□□□ -1.39
PNKP-208ENST00000596624 EIF5A2Q9GZV4 153 aaKnown RBP6.39□□□□□ -1.39
PNKP-208ENST00000596624 A0A087WZ39 114 aa6.38□□□□□ -1.39
PNKP-208ENST00000596624 NDUFA1O15239 70 aa6.38□□□□□ -1.39
PNKP-208ENST00000596624 TNFRSF6BO95407 300 aa6.38□□□□□ -1.39
PNKP-208ENST00000596624 CEBPGP53567 150 aa6.38□□□□□ -1.39
PNKP-208ENST00000596624 RPL39P62891 51 aaKnown RBP6.38□□□□□ -1.39
PNKP-208ENST00000596624 PRR26Q8N8Z3 221 aa6.38□□□□□ -1.39
PNKP-208ENST00000596624 ORAOV1Q8WV07 137 aa6.38□□□□□ -1.39
PNKP-208ENST00000596624 SMIM2Q9BVW6 85 aa6.38□□□□□ -1.39
PNKP-208ENST00000596624 SMDT1Q9H4I9 107 aa6.38□□□□□ -1.39
PNKP-208ENST00000596624 C6orf48Q9UBA6 75 aa6.38□□□□□ -1.39
PNKP-208ENST00000596624 A0A1B0GXF2 115 aa6.37□□□□□ -1.39
PNKP-208ENST00000596624 FAM168BA1KXE4 195 aa6.37□□□□□ -1.39
PNKP-208ENST00000596624 UNQ6190/PRO20217Q6UXQ8 127 aa6.37□□□□□ -1.39
PNKP-208ENST00000596624 PYGO1Q9Y3Y4 419 aa6.37□□□□□ -1.39
PNKP-208ENST00000596624 PRSS47A8MTI9 375 aa6.36□□□□□ -1.39
PNKP-208ENST00000596624 CKS2P33552 79 aa6.36□□□□□ -1.39
PNKP-208ENST00000596624 HBBP68871 147 aa6.36□□□□□ -1.39
PNKP-208ENST00000596624 AKAP14Q86UN6 197 aa6.36□□□□□ -1.39
PNKP-208ENST00000596624 LINC01561Q8N1V8 128 aa6.36□□□□□ -1.39
PNKP-208ENST00000596624 TRBV30A0A0K0K1B3 111 aa6.35□□□□□ -1.39
PNKP-208ENST00000596624 C9JQL5 133 aa6.35□□□□□ -1.39
PNKP-208ENST00000596624 PPBPP02775 128 aa6.35□□□□□ -1.39
PNKP-208ENST00000596624 LINC00242Q5T6M2 205 aa6.35□□□□□ -1.39
PNKP-208ENST00000596624 NAT8Q9UHE5 227 aa6.35□□□□□ -1.39
PNKP-208ENST00000596624 CARHSP1Q9Y2V2 147 aaKnown RBP6.35□□□□□ -1.39
PNKP-208ENST00000596624 D6R8Y8 96 aa6.34□□□□□ -1.39
PNKP-208ENST00000596624 NPYP01303 97 aa6.34□□□□□ -1.39
PNKP-208ENST00000596624 S100A8P05109 93 aa6.34□□□□□ -1.39
PNKP-208ENST00000596624 MUC2Q02817 5179 aa6.33□□□□□ -1.4
PNKP-208ENST00000596624 IFITM10A6NMD0 228 aa6.33□□□□□ -1.4
PNKP-208ENST00000596624 NDUFC2-KCTD14E9PQ53 114 aa6.33□□□□□ -1.4
PNKP-208ENST00000596624 F8W036 122 aa6.33□□□□□ -1.4
PNKP-208ENST00000596624 C9orf129Q5T035 196 aaKnown RBP6.33□□□□□ -1.4
PNKP-208ENST00000596624 FAM19A3Q7Z5A8 133 aa6.33□□□□□ -1.4
PNKP-208ENST00000596624 IGLV4-3A0A075B6K6 122 aa6.32□□□□□ -1.4
PNKP-208ENST00000596624 TGIF2-C20orf24A0A0A6YYL0 155 aa6.32□□□□□ -1.4
PNKP-208ENST00000596624 M0QXV9 152 aa6.32□□□□□ -1.4
PNKP-208ENST00000596624 RPL13AP40429 203 aaKnown RBP6.32□□□□□ -1.4
PNKP-208ENST00000596624 ADIRFQ15847 76 aa6.32□□□□□ -1.4
PNKP-208ENST00000596624 FAM19A5Q7Z5A7 132 aaPredicted RBP6.32□□□□□ -1.4
PNKP-208ENST00000596624 ZNF861PO60384 105 aa6.31□□□□□ -1.4
PNKP-208ENST00000596624 NPSP0C0P6 89 aa6.31□□□□□ -1.4
PNKP-208ENST00000596624 IFI27P40305 119 aaPredicted RBP6.31□□□□□ -1.4
PNKP-208ENST00000596624 UBE2D1P51668 147 aa6.31□□□□□ -1.4
PNKP-208ENST00000596624 GAGE2EQ4V326 116 aa6.31□□□□□ -1.4
PNKP-208ENST00000596624 ATP5L2Q7Z4Y8 100 aa6.31□□□□□ -1.4
PNKP-208ENST00000596624 ORMDL3Q8N138 153 aa6.31□□□□□ -1.4
PNKP-208ENST00000596624 TMEM141Q96I45 108 aa6.31□□□□□ -1.4
PNKP-208ENST00000596624 AMELXQ99217 191 aa6.31□□□□□ -1.4
PNKP-208ENST00000596624 GAGE2DQ9UEU5 116 aa6.31□□□□□ -1.4
PNKP-208ENST00000596624 SRSF3P84103 164 aaKnown RBP6.3□□□□□ -1.4
PNKP-208ENST00000596624 TMEM136Q6ZRR5 245 aa6.3□□□□□ -1.4
PNKP-208ENST00000596624 LINC00173Q6ZV60 143 aa6.3□□□□□ -1.4
PNKP-208ENST00000596624 LAMTOR2Q9Y2Q5 125 aa6.3□□□□□ -1.4
PNKP-208ENST00000596624 RAB5AP20339 215 aa6.29□□□□□ -1.4
PNKP-208ENST00000596624 MRPL54Q6P161 138 aaKnown RBP6.29□□□□□ -1.4
PNKP-208ENST00000596624 C2orf82Q6UX34 121 aa6.29□□□□□ -1.4
PNKP-208ENST00000596624 IGIPA6NJ69 53 aa6.28□□□□□ -1.4
PNKP-208ENST00000596624 NUPR1O60356 82 aa6.28□□□□□ -1.4
PNKP-208ENST00000596624 UBE2BP63146 152 aa6.28□□□□□ -1.4
PNKP-208ENST00000596624 PEA15Q15121 130 aa6.28□□□□□ -1.4
PNKP-208ENST00000596624 Q8IZM0 81 aa6.28□□□□□ -1.4
PNKP-208ENST00000596624 PACRGQ96M98 296 aaPredicted RBP6.28□□□□□ -1.4
PNKP-208ENST00000596624 PRELID3AQ96N28 172 aa6.28□□□□□ -1.4
PNKP-208ENST00000596624 TP73-AS1Q9UF72 201 aa6.28□□□□□ -1.4
PNKP-208ENST00000596624 K7EMI3 77 aa6.27□□□□□ -1.41
PNKP-208ENST00000596624 C2orf66Q6UXQ4 117 aa6.27□□□□□ -1.41
PNKP-208ENST00000596624 Q6ZN92 141 aa6.27□□□□□ -1.41
PNKP-208ENST00000596624 TEX43Q6ZNM6 134 aa6.27□□□□□ -1.41
PNKP-208ENST00000596624 A0A1B0GVG6 124 aa6.26□□□□□ -1.41
PNKP-208ENST00000596624 Q8N8P6 123 aa6.26□□□□□ -1.41
PNKP-208ENST00000596624 CYSLTR1Q9Y271 337 aa6.26□□□□□ -1.41
PNKP-208ENST00000596624 C22orf24Q9Y442 160 aa6.26□□□□□ -1.41
PNKP-208ENST00000596624 LBHQ53QV2 105 aaPredicted RBP6.25□□□□□ -1.41
PNKP-208ENST00000596624 C2orf88Q9BSF0 95 aa6.25□□□□□ -1.41
PNKP-208ENST00000596624 PRR4Q16378 134 aa6.24□□□□□ -1.41
PNKP-208ENST00000596624 LCE2AQ5TA79 106 aaPredicted RBP6.24□□□□□ -1.41
PNKP-208ENST00000596624 ZC2HC1BQ5TFG8 222 aa6.24□□□□□ -1.41
PNKP-208ENST00000596624 VCX2Q9H322 139 aa6.24□□□□□ -1.41
PNKP-208ENST00000596624 MAP1LC3AQ9H492 121 aa6.24□□□□□ -1.41
PNKP-208ENST00000596624 hCG_2014768A0A024R1R8 64 aa6.23□□□□□ -1.41
PNKP-208ENST00000596624 A0A087X002 238 aa6.23□□□□□ -1.41
PNKP-208ENST00000596624 F8VRH5 84 aa6.23□□□□□ -1.41
PNKP-208ENST00000596624 HERVK_113P63121 156 aa6.23□□□□□ -1.41
PNKP-208ENST00000596624 SEC11AP67812 179 aa6.23□□□□□ -1.41
PNKP-208ENST00000596624 ORMDL2Q53FV1 153 aa6.23□□□□□ -1.41
PNKP-208ENST00000596624 C6orf226Q5I0X4 101 aa6.23□□□□□ -1.41
PNKP-208ENST00000596624 CTDSP1Q9GZU7 261 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms