RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 DOCK10Q96BY6 2186 aa2.87□□□□□ -1.95
SMAD4-216ENST00000593223 A0A0B4J2C4 111 aa2.87□□□□□ -1.95
SMAD4-216ENST00000593223 TRBV10-2A0A0K0K1G8 114 aa2.87□□□□□ -1.95
SMAD4-216ENST00000593223 GNGT2O14610 69 aa2.87□□□□□ -1.95
SMAD4-216ENST00000593223 SLC25A6P12236 298 aa2.87□□□□□ -1.95
SMAD4-216ENST00000593223 POLR2JP52435 117 aaKnown RBP2.87□□□□□ -1.95
SMAD4-216ENST00000593223 FUT5Q11128 374 aa2.87□□□□□ -1.95
SMAD4-216ENST00000593223 DEFB116Q30KQ4 102 aa2.87□□□□□ -1.95
SMAD4-216ENST00000593223 TSLPQ969D9 159 aa2.87□□□□□ -1.95
SMAD4-216ENST00000593223 S100A16Q96FQ6 103 aaKnown RBP2.87□□□□□ -1.95
SMAD4-216ENST00000593223 FAM215AQ9Y5M1 114 aa2.87□□□□□ -1.95
SMAD4-216ENST00000593223 DNAH7Q8WXX0 4024 aa2.86□□□□□ -1.95
SMAD4-216ENST00000593223 DNAH3Q8TD57 4116 aa2.86□□□□□ -1.95
SMAD4-216ENST00000593223 TRAV7A0A075B6U4 112 aa2.86□□□□□ -1.95
SMAD4-216ENST00000593223 IGKV1OR2-108A0A075B7D4 117 aa2.86□□□□□ -1.95
SMAD4-216ENST00000593223 TRAV17A0A0B4J275 112 aa2.86□□□□□ -1.95
SMAD4-216ENST00000593223 TRBV7-7A0A0K0K1E9 115 aa2.86□□□□□ -1.95
SMAD4-216ENST00000593223 MDFIC2A0A1B0GVS7 189 aa2.86□□□□□ -1.95
SMAD4-216ENST00000593223 hDV103S1A0JD37 113 aa2.86□□□□□ -1.95
SMAD4-216ENST00000593223 A8MUU9 505 aa2.86□□□□□ -1.95
SMAD4-216ENST00000593223 ZNF705FA8MVS1 300 aaPredicted RBP2.86□□□□□ -1.95
SMAD4-216ENST00000593223 GNRH2O43555 120 aa2.86□□□□□ -1.95
SMAD4-216ENST00000593223 UBL3O95164 117 aa2.86□□□□□ -1.95
SMAD4-216ENST00000593223 IGHV3-53P01767 116 aa2.86□□□□□ -1.95
SMAD4-216ENST00000593223 SSR2P43308 183 aa2.86□□□□□ -1.95
SMAD4-216ENST00000593223 SEC11AP67812 179 aa2.86□□□□□ -1.95
SMAD4-216ENST00000593223 ADIRFQ15847 76 aa2.86□□□□□ -1.95
SMAD4-216ENST00000593223 ESRGQ1W209 222 aa2.86□□□□□ -1.95
SMAD4-216ENST00000593223 LYZL1Q6UWQ5 148 aa2.86□□□□□ -1.95
SMAD4-216ENST00000593223 Q8N8P6 123 aa2.86□□□□□ -1.95
SMAD4-216ENST00000593223 CYB561D1Q8N8Q1 229 aa2.86□□□□□ -1.95
SMAD4-216ENST00000593223 CST11Q9H112 138 aa2.86□□□□□ -1.95
SMAD4-216ENST00000593223 HHLA3Q9XRX5 114 aa2.86□□□□□ -1.95
SMAD4-216ENST00000593223 IGKV1D-37A0A075B6S9 117 aa2.85□□□□□ -1.95
SMAD4-216ENST00000593223 C17orf98A8MV24 154 aa2.85□□□□□ -1.95
SMAD4-216ENST00000593223 ATOX1O00244 68 aa2.85□□□□□ -1.95
SMAD4-216ENST00000593223 KRTDAPP60985 99 aa2.85□□□□□ -1.95
SMAD4-216ENST00000593223 HMGN3Q15651 99 aa2.85□□□□□ -1.95
SMAD4-216ENST00000593223 Q6ZR03 302 aa2.85□□□□□ -1.95
SMAD4-216ENST00000593223 C1orf64Q8NEQ6 169 aa2.85□□□□□ -1.95
SMAD4-216ENST00000593223 ZNF431Q8TF32 576 aaPredicted RBP2.85□□□□□ -1.95
SMAD4-216ENST00000593223 SMIM7Q9BQ49 75 aa2.85□□□□□ -1.95
SMAD4-216ENST00000593223 PMCHL2Q9BQD1 86 aa2.85□□□□□ -1.95
SMAD4-216ENST00000593223 ST20Q9HBF5 79 aa2.85□□□□□ -1.95
SMAD4-216ENST00000593223 TRAV2A0A0B4J234 112 aa2.84□□□□□ -1.95
SMAD4-216ENST00000593223 H3BQ85 93 aa2.84□□□□□ -1.95
SMAD4-216ENST00000593223 H3BRM9 83 aa2.84□□□□□ -1.95
SMAD4-216ENST00000593223 H7C2G1 150 aa2.84□□□□□ -1.95
SMAD4-216ENST00000593223 IGKCP01834 107 aa2.84□□□□□ -1.95
SMAD4-216ENST00000593223 IGLV7-43P04211 117 aa2.84□□□□□ -1.95
SMAD4-216ENST00000593223 SPANXN1Q5VSR9 72 aa2.84□□□□□ -1.95
SMAD4-216ENST00000593223 KRTAP5-5Q701N2 237 aaPredicted RBP2.84□□□□□ -1.95
SMAD4-216ENST00000593223 MYOZ3Q8TDC0 251 aa2.84□□□□□ -1.95
SMAD4-216ENST00000593223 MGST2Q99735 147 aa2.84□□□□□ -1.95
SMAD4-216ENST00000593223 RNF5Q99942 180 aa2.84□□□□□ -1.95
SMAD4-216ENST00000593223 C14orf132Q9NPU4 83 aa2.84□□□□□ -1.95
SMAD4-216ENST00000593223 PLXNB1O43157 2135 aa2.84□□□□□ -1.96
SMAD4-216ENST00000593223 MED12Q93074 2177 aa2.84□□□□□ -1.96
SMAD4-216ENST00000593223 CCDC88CQ9P219 2028 aa2.83□□□□□ -1.96
SMAD4-216ENST00000593223 A0A096LNT2 108 aa2.83□□□□□ -1.96
SMAD4-216ENST00000593223 LRCOL1A6NCL2 159 aa2.83□□□□□ -1.96
SMAD4-216ENST00000593223 IBA57-AS1B1ANH7 110 aa2.83□□□□□ -1.96
SMAD4-216ENST00000593223 M0R233 179 aa2.83□□□□□ -1.96
SMAD4-216ENST00000593223 IGLV1-51P01701 117 aa2.83□□□□□ -1.96
SMAD4-216ENST00000593223 PIRTP0C851 137 aa2.83□□□□□ -1.96
SMAD4-216ENST00000593223 CBLN1P23435 193 aa2.83□□□□□ -1.96
SMAD4-216ENST00000593223 ROMO1P60602 79 aa2.83□□□□□ -1.96
SMAD4-216ENST00000593223 CCL8P80075 99 aa2.83□□□□□ -1.96
SMAD4-216ENST00000593223 FAM229BQ4G0N7 80 aa2.83□□□□□ -1.96
SMAD4-216ENST00000593223 LINC00483Q53H64 154 aa2.83□□□□□ -1.96
SMAD4-216ENST00000593223 Q5W150 140 aa2.83□□□□□ -1.96
SMAD4-216ENST00000593223 Q6ZQT0 140 aa2.83□□□□□ -1.96
SMAD4-216ENST00000593223 TMEM136Q6ZRR5 245 aa2.83□□□□□ -1.96
SMAD4-216ENST00000593223 COMMD6Q7Z4G1 85 aa2.83□□□□□ -1.96
SMAD4-216ENST00000593223 Q8IYB0 196 aa2.83□□□□□ -1.96
SMAD4-216ENST00000593223 Q8N814 137 aa2.83□□□□□ -1.96
SMAD4-216ENST00000593223 LINC00301Q8NCQ3 95 aa2.83□□□□□ -1.96
SMAD4-216ENST00000593223 CACFD1Q9UGQ2 172 aa2.83□□□□□ -1.96
SMAD4-216ENST00000593223 IGLV3-12A0A075B6K2 115 aa2.82□□□□□ -1.96
SMAD4-216ENST00000593223 Q1T7F1 81 aa2.82□□□□□ -1.96
SMAD4-216ENST00000593223 LGALSLQ3ZCW2 172 aaPredicted RBP2.82□□□□□ -1.96
SMAD4-216ENST00000593223 SLC25A26Q70HW3 274 aa2.82□□□□□ -1.96
SMAD4-216ENST00000593223 DYNLRB2Q8TF09 96 aa2.82□□□□□ -1.96
SMAD4-216ENST00000593223 PPDPFLQ8WWR9 84 aa2.82□□□□□ -1.96
SMAD4-216ENST00000593223 C20orf78Q9BR46 151 aa2.82□□□□□ -1.96
SMAD4-216ENST00000593223 MALRD1Q5VYJ5 2156 aa2.82□□□□□ -1.96
SMAD4-216ENST00000593223 TRAV1-1A0A0B4J248 108 aa2.81□□□□□ -1.96
SMAD4-216ENST00000593223 CLPSP04118 112 aa2.81□□□□□ -1.96
SMAD4-216ENST00000593223 CCKP06307 115 aa2.81□□□□□ -1.96
SMAD4-216ENST00000593223 IGLC2P0DOY2 106 aa2.81□□□□□ -1.96
SMAD4-216ENST00000593223 IGLC3P0DOY3 106 aa2.81□□□□□ -1.96
SMAD4-216ENST00000593223 INSL4Q14641 139 aa2.81□□□□□ -1.96
SMAD4-216ENST00000593223 SPANXN5Q5MJ07 72 aa2.81□□□□□ -1.96
SMAD4-216ENST00000593223 FAM27BQ5VT28 67 aa2.81□□□□□ -1.96
SMAD4-216ENST00000593223 PP632Q6XCG6 107 aa2.81□□□□□ -1.96
SMAD4-216ENST00000593223 HMGN2P46Q86SG4 172 aa2.81□□□□□ -1.96
SMAD4-216ENST00000593223 TMEM141Q96I45 108 aa2.81□□□□□ -1.96
SMAD4-216ENST00000593223 MRPL35Q9NZE8 188 aaKnown RBP2.81□□□□□ -1.96
SMAD4-216ENST00000593223 SPCS1Q9Y6A9 102 aa2.81□□□□□ -1.96
SMAD4-216ENST00000593223 HEATR5AQ86XA9 2040 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms