RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 SPANXA1Q9NS26 97 aa9.92□□□□□ -0.82
TRIM47-206ENST00000592942 S100A6P06703 90 aa9.91□□□□□ -0.82
TRIM47-206ENST00000592942 SS18Q15532 418 aa9.91□□□□□ -0.82
TRIM47-206ENST00000592942 CD164L2Q6UWJ8 174 aa9.91□□□□□ -0.82
TRIM47-206ENST00000592942 PYGO1Q9Y3Y4 419 aa9.91□□□□□ -0.82
TRIM47-206ENST00000592942 A0A096LNJ9 63 aa9.9□□□□□ -0.82
TRIM47-206ENST00000592942 LINC01549A6NIU2 74 aa9.9□□□□□ -0.82
TRIM47-206ENST00000592942 C9orf163Q8N9P6 203 aa9.9□□□□□ -0.82
TRIM47-206ENST00000592942 TRAV13-1A0A0B4J241 112 aa9.89□□□□□ -0.83
TRIM47-206ENST00000592942 hDV102S1A0JD36 115 aa9.89□□□□□ -0.83
TRIM47-206ENST00000592942 HBDP02042 147 aa9.89□□□□□ -0.83
TRIM47-206ENST00000592942 CNBPP62633 177 aaKnown RBP9.89□□□□□ -0.83
TRIM47-206ENST00000592942 HAMPP81172 84 aa9.89□□□□□ -0.83
TRIM47-206ENST00000592942 C2orf66Q6UXQ4 117 aa9.89□□□□□ -0.83
TRIM47-206ENST00000592942 CYSLTR1Q9Y271 337 aa9.89□□□□□ -0.83
TRIM47-206ENST00000592942 IGLV4-3A0A075B6K6 122 aa9.88□□□□□ -0.83
TRIM47-206ENST00000592942 IGIPA6NJ69 53 aa9.88□□□□□ -0.83
TRIM47-206ENST00000592942 CFAP161Q6P656 301 aa9.88□□□□□ -0.83
TRIM47-206ENST00000592942 TOMM6Q96B49 74 aa9.88□□□□□ -0.83
TRIM47-206ENST00000592942 C5orf52A6NGY3 159 aa9.87□□□□□ -0.83
TRIM47-206ENST00000592942 PMCHL1Q16048 86 aa9.87□□□□□ -0.83
TRIM47-206ENST00000592942 PDZD11Q5EBL8 140 aa9.87□□□□□ -0.83
TRIM47-206ENST00000592942 SDIM1Q6ZPB5 146 aa9.87□□□□□ -0.83
TRIM47-206ENST00000592942 Q8N1X5 172 aa9.87□□□□□ -0.83
TRIM47-206ENST00000592942 FAM19A2Q8N3H0 131 aa9.87□□□□□ -0.83
TRIM47-206ENST00000592942 TMA7Q9Y2S6 64 aaKnown RBP9.87□□□□□ -0.83
TRIM47-206ENST00000592942 GVQW2A0A096LPI5 108 aaPredicted RBP9.86□□□□□ -0.83
TRIM47-206ENST00000592942 SNRPEP62304 92 aaKnown RBP9.86□□□□□ -0.83
TRIM47-206ENST00000592942 HIGD2BQ4VC39 106 aa9.86□□□□□ -0.83
TRIM47-206ENST00000592942 ZC2HC1BQ5TFG8 222 aa9.86□□□□□ -0.83
TRIM47-206ENST00000592942 PACRGQ96M98 296 aaPredicted RBP9.86□□□□□ -0.83
TRIM47-206ENST00000592942 IGHV3OR16-9A0A0B4J2B5 98 aa9.85□□□□□ -0.83
TRIM47-206ENST00000592942 NPSP0C0P6 89 aa9.85□□□□□ -0.83
TRIM47-206ENST00000592942 LINC00173Q6ZV60 143 aa9.85□□□□□ -0.83
TRIM47-206ENST00000592942 HIST3H2BBQ8N257 126 aa9.85□□□□□ -0.83
TRIM47-206ENST00000592942 AMELXQ99217 191 aa9.85□□□□□ -0.83
TRIM47-206ENST00000592942 IGHV1-58A0A0C4DH39 117 aa9.84□□□□□ -0.83
TRIM47-206ENST00000592942 ERASQ7Z444 233 aa9.84□□□□□ -0.83
TRIM47-206ENST00000592942 C5orf38Q86SI9 138 aa9.84□□□□□ -0.83
TRIM47-206ENST00000592942 LINC00526Q96FQ7 95 aa9.84□□□□□ -0.83
TRIM47-206ENST00000592942 TMEM141Q96I45 108 aa9.84□□□□□ -0.83
TRIM47-206ENST00000592942 TIMM17AQ99595 171 aa9.84□□□□□ -0.83
TRIM47-206ENST00000592942 PANO1I0J062 215 aa9.83□□□□□ -0.84
TRIM47-206ENST00000592942 COX7A2LO14548 114 aa9.83□□□□□ -0.84
TRIM47-206ENST00000592942 LEPROTL1O95214 131 aa9.83□□□□□ -0.84
TRIM47-206ENST00000592942 SMR3BP02814 79 aaPredicted RBP9.83□□□□□ -0.84
TRIM47-206ENST00000592942 COX6A2Q02221 97 aa9.83□□□□□ -0.84
TRIM47-206ENST00000592942 SCGB3A1Q96QR1 104 aa9.83□□□□□ -0.84
TRIM47-206ENST00000592942 HERC1Q15751 4861 aa9.82□□□□□ -0.84
TRIM47-206ENST00000592942 IFITM10A6NMD0 228 aa9.82□□□□□ -0.84
TRIM47-206ENST00000592942 ATP5LO75964 103 aa9.82□□□□□ -0.84
TRIM47-206ENST00000592942 UBE2D1P51668 147 aa9.82□□□□□ -0.84
TRIM47-206ENST00000592942 LINC00242Q5T6M2 205 aa9.82□□□□□ -0.84
TRIM47-206ENST00000592942 CHAC1Q9BUX1 264 aa9.82□□□□□ -0.84
TRIM47-206ENST00000592942 S100A2P29034 98 aa9.81□□□□□ -0.84
TRIM47-206ENST00000592942 SCXQ7RTU7 201 aa9.81□□□□□ -0.84
TRIM47-206ENST00000592942 HSPB8Q9UJY1 196 aa9.81□□□□□ -0.84
TRIM47-206ENST00000592942 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.81□□□□□ -0.84
TRIM47-206ENST00000592942 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.8□□□□□ -0.84
TRIM47-206ENST00000592942 TEX43Q6ZNM6 134 aa9.8□□□□□ -0.84
TRIM47-206ENST00000592942 CIRBP-AS1Q8TBR5 109 aa9.8□□□□□ -0.84
TRIM47-206ENST00000592942 HIST1H2BLQ99880 126 aa9.8□□□□□ -0.84
TRIM47-206ENST00000592942 VCX2Q9H322 139 aa9.8□□□□□ -0.84
TRIM47-206ENST00000592942 VPS13BQ7Z7G8 4022 aa9.8□□□□□ -0.84
TRIM47-206ENST00000592942 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.79□□□□□ -0.84
TRIM47-206ENST00000592942 FABP4P15090 132 aa9.79□□□□□ -0.84
TRIM47-206ENST00000592942 PAPPA-AS1Q5QFB9 102 aa9.79□□□□□ -0.84
TRIM47-206ENST00000592942 FAM19A3Q7Z5A8 133 aa9.79□□□□□ -0.84
TRIM47-206ENST00000592942 IFI27L1Q96BM0 104 aa9.79□□□□□ -0.84
TRIM47-206ENST00000592942 IGLV4-69A0A075B6H9 119 aa9.78□□□□□ -0.84
TRIM47-206ENST00000592942 IGHV3-64A0A075B6Q5 118 aa9.78□□□□□ -0.84
TRIM47-206ENST00000592942 MALP21145 153 aa9.78□□□□□ -0.84
TRIM47-206ENST00000592942 CIRBPQ14011 172 aaKnown RBP9.78□□□□□ -0.84
TRIM47-206ENST00000592942 A0A087WZ39 114 aa9.77□□□□□ -0.85
TRIM47-206ENST00000592942 ZNF561-AS1K7EIQ3 104 aa9.77□□□□□ -0.85
TRIM47-206ENST00000592942 Q6ZN92 141 aa9.77□□□□□ -0.85
TRIM47-206ENST00000592942 EPM2AB3EWF7 344 aa9.76□□□□□ -0.85
TRIM47-206ENST00000592942 TRAV12-1A0A0B4J245 112 aa9.75□□□□□ -0.85
TRIM47-206ENST00000592942 APOMO95445 188 aa9.75□□□□□ -0.85
TRIM47-206ENST00000592942 CHTF8P0CG12 524 aa9.75□□□□□ -0.85
TRIM47-206ENST00000592942 SYCNQ0VAF6 134 aa9.75□□□□□ -0.85
TRIM47-206ENST00000592942 KIAA0087Q14695 138 aa9.75□□□□□ -0.85
TRIM47-206ENST00000592942 PMVKQ15126 192 aa9.75□□□□□ -0.85
TRIM47-206ENST00000592942 Q5VSD8 79 aa9.75□□□□□ -0.85
TRIM47-206ENST00000592942 Q6ZRU5 148 aa9.75□□□□□ -0.85
TRIM47-206ENST00000592942 C2orf48Q96LS8 159 aa9.75□□□□□ -0.85
TRIM47-206ENST00000592942 C2orf88Q9BSF0 95 aa9.75□□□□□ -0.85
TRIM47-206ENST00000592942 MAP1LC3CQ9BXW4 147 aa9.75□□□□□ -0.85
TRIM47-206ENST00000592942 OR10D4PQ8NGN7 298 aa9.74□□□□□ -0.85
TRIM47-206ENST00000592942 CARD19Q96LW7 228 aa9.74□□□□□ -0.85
TRIM47-206ENST00000592942 SYS1-DBNDD2H3BUS1 97 aa9.73□□□□□ -0.85
TRIM47-206ENST00000592942 C3orf79P0CE67 100 aa9.73□□□□□ -0.85
TRIM47-206ENST00000592942 LINC01561Q8N1V8 128 aa9.73□□□□□ -0.85
TRIM47-206ENST00000592942 SPACA4Q8TDM5 124 aa9.73□□□□□ -0.85
TRIM47-206ENST00000592942 ORAOV1Q8WV07 137 aa9.73□□□□□ -0.85
TRIM47-206ENST00000592942 CST9LQ9H4G1 147 aa9.73□□□□□ -0.85
TRIM47-206ENST00000592942 A0A0J9YXV3 536 aa9.72□□□□□ -0.85
TRIM47-206ENST00000592942 SPAG11BQ08648 103 aa9.72□□□□□ -0.85
TRIM47-206ENST00000592942 PET117Q6UWS5 81 aa9.72□□□□□ -0.85
TRIM47-206ENST00000592942 FAM229AH3BQW9 127 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms