RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 UBE2D4Q9Y2X8 147 aa6.33□□□□□ -1.4
VMP1-214ENST00000592106 HMCN2Q8NDA2 5059 aa6.33□□□□□ -1.4
VMP1-214ENST00000592106 A0A0J9YXV3 536 aa6.32□□□□□ -1.4
VMP1-214ENST00000592106 LINC00862A6NCI5 91 aa6.32□□□□□ -1.4
VMP1-214ENST00000592106 RPL18AQ02543 176 aaKnown RBP6.32□□□□□ -1.4
VMP1-214ENST00000592106 SPAG11BQ08648 103 aa6.32□□□□□ -1.4
VMP1-214ENST00000592106 ADIRFQ15847 76 aa6.32□□□□□ -1.4
VMP1-214ENST00000592106 TMEM241Q24JQ0 296 aa6.32□□□□□ -1.4
VMP1-214ENST00000592106 NRACQ8N912 160 aa6.32□□□□□ -1.4
VMP1-214ENST00000592106 C20orf78Q9BR46 151 aa6.32□□□□□ -1.4
VMP1-214ENST00000592106 F8W036 122 aa6.31□□□□□ -1.4
VMP1-214ENST00000592106 F8WDY8 70 aa6.31□□□□□ -1.4
VMP1-214ENST00000592106 CKS2P33552 79 aa6.31□□□□□ -1.4
VMP1-214ENST00000592106 RPL23P62829 140 aaKnown RBP6.31□□□□□ -1.4
VMP1-214ENST00000592106 RNASE13Q5GAN3 156 aaKnown RBP6.31□□□□□ -1.4
VMP1-214ENST00000592106 FAM104BQ5XKR9 115 aa6.31□□□□□ -1.4
VMP1-214ENST00000592106 Q6ZUT4 128 aa6.31□□□□□ -1.4
VMP1-214ENST00000592106 OR10D4PQ8NGN7 298 aa6.31□□□□□ -1.4
VMP1-214ENST00000592106 SPANXA1Q9NS26 97 aa6.31□□□□□ -1.4
VMP1-214ENST00000592106 NAT8Q9UHE5 227 aa6.31□□□□□ -1.4
VMP1-214ENST00000592106 MT-ND6P03923 174 aa6.3□□□□□ -1.4
VMP1-214ENST00000592106 RPL32P62910 135 aaKnown RBP6.3□□□□□ -1.4
VMP1-214ENST00000592106 ODF1Q14990 250 aa6.3□□□□□ -1.4
VMP1-214ENST00000592106 RNF151Q2KHN1 245 aa6.3□□□□□ -1.4
VMP1-214ENST00000592106 MRPL51Q4U2R6 128 aaKnown RBP6.3□□□□□ -1.4
VMP1-214ENST00000592106 C5orf38Q86SI9 138 aa6.3□□□□□ -1.4
VMP1-214ENST00000592106 SMIM27A0A1W2PRY6 76 aa6.29□□□□□ -1.4
VMP1-214ENST00000592106 HBBP68871 147 aa6.29□□□□□ -1.4
VMP1-214ENST00000592106 PEA15Q15121 130 aa6.29□□□□□ -1.4
VMP1-214ENST00000592106 SMIM2Q9BVW6 85 aa6.29□□□□□ -1.4
VMP1-214ENST00000592106 TRBV24-1A0A075B6N3 115 aa6.28□□□□□ -1.4
VMP1-214ENST00000592106 IFITM10A6NMD0 228 aa6.28□□□□□ -1.4
VMP1-214ENST00000592106 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.28□□□□□ -1.4
VMP1-214ENST00000592106 NDUFA1O15239 70 aa6.28□□□□□ -1.4
VMP1-214ENST00000592106 C9orf116Q5BN46 136 aaPredicted RBP6.28□□□□□ -1.4
VMP1-214ENST00000592106 ORAOV1Q8WV07 137 aa6.28□□□□□ -1.4
VMP1-214ENST00000592106 IMMP2LQ96T52 175 aa6.28□□□□□ -1.4
VMP1-214ENST00000592106 MRPL35Q9NZE8 188 aaKnown RBP6.28□□□□□ -1.4
VMP1-214ENST00000592106 TGIF2-C20orf24A0A0A6YYL0 155 aa6.27□□□□□ -1.41
VMP1-214ENST00000592106 D6R8Y8 96 aa6.27□□□□□ -1.41
VMP1-214ENST00000592106 TNFRSF6BO95407 300 aa6.27□□□□□ -1.41
VMP1-214ENST00000592106 PPBPP02775 128 aa6.27□□□□□ -1.41
VMP1-214ENST00000592106 MRPS36P82909 103 aaKnown RBP6.27□□□□□ -1.41
VMP1-214ENST00000592106 SRSF9Q13242 221 aaKnown RBP eCLIP6.27□□□□□ -1.41
VMP1-214ENST00000592106 SMDT1Q9H4I9 107 aa6.27□□□□□ -1.41
VMP1-214ENST00000592106 A0A1W2PNN7 141 aa6.26□□□□□ -1.41
VMP1-214ENST00000592106 RAB5AP20339 215 aa6.26□□□□□ -1.41
VMP1-214ENST00000592106 IFI27P40305 119 aaPredicted RBP6.26□□□□□ -1.41
VMP1-214ENST00000592106 RPL39P62891 51 aaKnown RBP6.26□□□□□ -1.41
VMP1-214ENST00000592106 C1orf137Q5JT78 98 aa6.26□□□□□ -1.41
VMP1-214ENST00000592106 MRPL54Q6P161 138 aaKnown RBP6.26□□□□□ -1.41
VMP1-214ENST00000592106 PSORS1C2Q9UIG4 136 aa6.26□□□□□ -1.41
VMP1-214ENST00000592106 KRTAP4-8A0A0G2JLE6 195 aa6.25□□□□□ -1.41
VMP1-214ENST00000592106 KRTAP10-8P60410 259 aa6.25□□□□□ -1.41
VMP1-214ENST00000592106 ATP5L2Q7Z4Y8 100 aa6.25□□□□□ -1.41
VMP1-214ENST00000592106 ORMDL3Q8N138 153 aa6.25□□□□□ -1.41
VMP1-214ENST00000592106 OPRPNQ99935 248 aaPredicted RBP6.25□□□□□ -1.41
VMP1-214ENST00000592106 IGHV3OR16-9A0A0B4J2B5 98 aa6.24□□□□□ -1.41
VMP1-214ENST00000592106 A0A1B0GXF2 115 aa6.24□□□□□ -1.41
VMP1-214ENST00000592106 NPYP01303 97 aa6.24□□□□□ -1.41
VMP1-214ENST00000592106 PHF5AQ7RTV0 110 aaKnown RBP6.24□□□□□ -1.41
VMP1-214ENST00000592106 DIRC1Q969H9 104 aa6.24□□□□□ -1.41
VMP1-214ENST00000592106 TLX1NBP0CAT3 122 aa6.23□□□□□ -1.41
VMP1-214ENST00000592106 Q6ZN92 141 aa6.23□□□□□ -1.41
VMP1-214ENST00000592106 C2orf88Q9BSF0 95 aa6.23□□□□□ -1.41
VMP1-214ENST00000592106 LAMTOR2Q9Y2Q5 125 aa6.23□□□□□ -1.41
VMP1-214ENST00000592106 TNXBP22105 4242 aa6.22□□□□□ -1.41
VMP1-214ENST00000592106 TEX43Q6ZNM6 134 aa6.22□□□□□ -1.41
VMP1-214ENST00000592106 TMEM136Q6ZRR5 245 aa6.22□□□□□ -1.41
VMP1-214ENST00000592106 FAM19A5Q7Z5A7 132 aaPredicted RBP6.22□□□□□ -1.41
VMP1-214ENST00000592106 TMEM141Q96I45 108 aa6.22□□□□□ -1.41
VMP1-214ENST00000592106 PACRGQ96M98 296 aaPredicted RBP6.22□□□□□ -1.41
VMP1-214ENST00000592106 PRELID3AQ96N28 172 aa6.22□□□□□ -1.41
VMP1-214ENST00000592106 MAP1LC3AQ9H492 121 aa6.22□□□□□ -1.41
VMP1-214ENST00000592106 PYGO1Q9Y3Y4 419 aa6.22□□□□□ -1.41
VMP1-214ENST00000592106 A0A087WZ39 114 aa6.21□□□□□ -1.42
VMP1-214ENST00000592106 TRBV30A0A0K0K1B3 111 aa6.21□□□□□ -1.42
VMP1-214ENST00000592106 C9JQL5 133 aa6.21□□□□□ -1.42
VMP1-214ENST00000592106 IGLV7-43P04211 117 aa6.21□□□□□ -1.42
VMP1-214ENST00000592106 UBE2BP63146 152 aa6.21□□□□□ -1.42
VMP1-214ENST00000592106 GAGE2EQ4V326 116 aa6.21□□□□□ -1.42
VMP1-214ENST00000592106 LCE4AQ5TA78 99 aa6.21□□□□□ -1.42
VMP1-214ENST00000592106 LINC01561Q8N1V8 128 aa6.21□□□□□ -1.42
VMP1-214ENST00000592106 C6orf48Q9UBA6 75 aa6.21□□□□□ -1.42
VMP1-214ENST00000592106 GAGE2DQ9UEU5 116 aa6.21□□□□□ -1.42
VMP1-214ENST00000592106 IGLV4-3A0A075B6K6 122 aa6.2□□□□□ -1.42
VMP1-214ENST00000592106 M0QXV9 152 aa6.2□□□□□ -1.42
VMP1-214ENST00000592106 PRSS2P07478 247 aa6.2□□□□□ -1.42
VMP1-214ENST00000592106 UNQ6190/PRO20217Q6UXQ8 127 aa6.2□□□□□ -1.42
VMP1-214ENST00000592106 CYSLTR1Q9Y271 337 aa6.2□□□□□ -1.42
VMP1-214ENST00000592106 H0Y9J4 135 aa6.19□□□□□ -1.42
VMP1-214ENST00000592106 PNRC1Q12796 327 aaPredicted RBP6.19□□□□□ -1.42
VMP1-214ENST00000592106 LINC00242Q5T6M2 205 aa6.19□□□□□ -1.42
VMP1-214ENST00000592106 C10orf25Q5T742 122 aa6.19□□□□□ -1.42
VMP1-214ENST00000592106 LCE1DQ5T752 114 aa6.19□□□□□ -1.42
VMP1-214ENST00000592106 LOC389332A0A1B0GUA5 103 aa6.18□□□□□ -1.42
VMP1-214ENST00000592106 NDUFC2-KCTD14E9PQ53 114 aa6.18□□□□□ -1.42
VMP1-214ENST00000592106 K7EMI3 77 aa6.18□□□□□ -1.42
VMP1-214ENST00000592106 NPSP0C0P6 89 aa6.18□□□□□ -1.42
VMP1-214ENST00000592106 UBE2D1P51668 147 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms