RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 LAMTOR2Q9Y2Q5 125 aa7.78□□□□□ -1.16
PRKCSH-210ENST00000589990 TRAPPC1Q9Y5R8 145 aa7.78□□□□□ -1.16
PRKCSH-210ENST00000589990 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.77□□□□□ -1.17
PRKCSH-210ENST00000589990 IGKV2-29A2NJV5 120 aaPredicted RBP7.77□□□□□ -1.17
PRKCSH-210ENST00000589990 RPL32P62910 135 aaKnown RBP7.77□□□□□ -1.17
PRKCSH-210ENST00000589990 AMMECR1LQ6DCA0 310 aa7.77□□□□□ -1.17
PRKCSH-210ENST00000589990 RNASEKQ6P5S7 137 aaKnown RBP7.77□□□□□ -1.17
PRKCSH-210ENST00000589990 CFAP161Q6P656 301 aa7.77□□□□□ -1.17
PRKCSH-210ENST00000589990 SMIM2Q9BVW6 85 aa7.77□□□□□ -1.17
PRKCSH-210ENST00000589990 TCAPO15273 167 aa7.76□□□□□ -1.17
PRKCSH-210ENST00000589990 ESDP10768 282 aa7.76□□□□□ -1.17
PRKCSH-210ENST00000589990 RAB5AP20339 215 aa7.76□□□□□ -1.17
PRKCSH-210ENST00000589990 CHCHD10Q8WYQ3 142 aaPredicted RBP7.76□□□□□ -1.17
PRKCSH-210ENST00000589990 YPEL4Q96NS1 127 aa7.76□□□□□ -1.17
PRKCSH-210ENST00000589990 PSORS1C2Q9UIG4 136 aa7.76□□□□□ -1.17
PRKCSH-210ENST00000589990 A0A0U1RQV1 116 aa7.75□□□□□ -1.17
PRKCSH-210ENST00000589990 A0A1W2PNN7 141 aa7.75□□□□□ -1.17
PRKCSH-210ENST00000589990 PRR4Q16378 134 aa7.75□□□□□ -1.17
PRKCSH-210ENST00000589990 PRSS47A8MTI9 375 aa7.74□□□□□ -1.17
PRKCSH-210ENST00000589990 H7C423 109 aa7.74□□□□□ -1.17
PRKCSH-210ENST00000589990 FGF6P10767 208 aa7.74□□□□□ -1.17
PRKCSH-210ENST00000589990 FOXI1Q12951 378 aa7.74□□□□□ -1.17
PRKCSH-210ENST00000589990 ZNF664Q8N3J9 261 aa7.74□□□□□ -1.17
PRKCSH-210ENST00000589990 Q8N8P6 123 aa7.74□□□□□ -1.17
PRKCSH-210ENST00000589990 TMEM18Q96B42 140 aa7.74□□□□□ -1.17
PRKCSH-210ENST00000589990 TMEM101Q96IK0 257 aa7.74□□□□□ -1.17
PRKCSH-210ENST00000589990 ALKBH7Q9BT30 221 aaPredicted RBP7.74□□□□□ -1.17
PRKCSH-210ENST00000589990 SCO1O75880 301 aa7.73□□□□□ -1.17
PRKCSH-210ENST00000589990 IFI27P40305 119 aaPredicted RBP7.73□□□□□ -1.17
PRKCSH-210ENST00000589990 NXT2Q9NPJ8 142 aaKnown RBP7.73□□□□□ -1.17
PRKCSH-210ENST00000589990 LINC00474Q9P2X8 69 aa7.73□□□□□ -1.17
PRKCSH-210ENST00000589990 SMAGPQ0VAQ4 97 aa7.72□□□□□ -1.17
PRKCSH-210ENST00000589990 CARD19Q96LW7 228 aa7.72□□□□□ -1.17
PRKCSH-210ENST00000589990 ZNF25P17030 456 aaPredicted RBP7.71□□□□□ -1.18
PRKCSH-210ENST00000589990 S100A1P23297 94 aa7.71□□□□□ -1.18
PRKCSH-210ENST00000589990 PTTG1IPP53801 180 aa7.71□□□□□ -1.18
PRKCSH-210ENST00000589990 RPL39P62891 51 aaKnown RBP7.71□□□□□ -1.18
PRKCSH-210ENST00000589990 GAGE2BQ13066 116 aa7.71□□□□□ -1.18
PRKCSH-210ENST00000589990 C1orf137Q5JT78 98 aa7.71□□□□□ -1.18
PRKCSH-210ENST00000589990 OR5A1Q8NGJ0 315 aa7.71□□□□□ -1.18
PRKCSH-210ENST00000589990 COLCA2A8K830 154 aa7.7□□□□□ -1.18
PRKCSH-210ENST00000589990 ATP6V1G1O75348 118 aa7.7□□□□□ -1.18
PRKCSH-210ENST00000589990 ORMDL2Q53FV1 153 aa7.7□□□□□ -1.18
PRKCSH-210ENST00000589990 PHF5AQ7RTV0 110 aaKnown RBP7.7□□□□□ -1.18
PRKCSH-210ENST00000589990 KRTAP11-1Q8IUC1 163 aa7.7□□□□□ -1.18
PRKCSH-210ENST00000589990 K7EMI3 77 aa7.69□□□□□ -1.18
PRKCSH-210ENST00000589990 XCL1P47992 114 aa7.69□□□□□ -1.18
PRKCSH-210ENST00000589990 FA2HQ7L5A8 372 aa7.69□□□□□ -1.18
PRKCSH-210ENST00000589990 MRPL52Q86TS9 123 aaKnown RBP7.69□□□□□ -1.18
PRKCSH-210ENST00000589990 UBE2D4Q9Y2X8 147 aa7.69□□□□□ -1.18
PRKCSH-210ENST00000589990 TRGC2P03986 189 aa7.68□□□□□ -1.18
PRKCSH-210ENST00000589990 KRTAP1-4P0C5Y4 121 aa7.68□□□□□ -1.18
PRKCSH-210ENST00000589990 G0S2P27469 103 aa7.68□□□□□ -1.18
PRKCSH-210ENST00000589990 C18orf32Q8TCD1 76 aa7.68□□□□□ -1.18
PRKCSH-210ENST00000589990 TIMM21Q9BVV7 248 aa7.68□□□□□ -1.18
PRKCSH-210ENST00000589990 CDC42SE2Q9NRR3 84 aa7.68□□□□□ -1.18
PRKCSH-210ENST00000589990 SYCNQ0VAF6 134 aa7.67□□□□□ -1.18
PRKCSH-210ENST00000589990 C9orf116Q5BN46 136 aaPredicted RBP7.67□□□□□ -1.18
PRKCSH-210ENST00000589990 RNASE13Q5GAN3 156 aaKnown RBP7.67□□□□□ -1.18
PRKCSH-210ENST00000589990 C2orf66Q6UXQ4 117 aa7.67□□□□□ -1.18
PRKCSH-210ENST00000589990 CYSLTR1Q9Y271 337 aa7.67□□□□□ -1.18
PRKCSH-210ENST00000589990 CSDC2Q9Y534 153 aaKnown RBP7.67□□□□□ -1.18
PRKCSH-210ENST00000589990 CCL25O15444 150 aa7.66□□□□□ -1.18
PRKCSH-210ENST00000589990 IGLV7-43P04211 117 aa7.66□□□□□ -1.18
PRKCSH-210ENST00000589990 LINC00614P0C842 121 aa7.66□□□□□ -1.18
PRKCSH-210ENST00000589990 OPRPNQ99935 248 aaPredicted RBP7.66□□□□□ -1.18
PRKCSH-210ENST00000589990 SPANXA1Q9NS26 97 aa7.66□□□□□ -1.18
PRKCSH-210ENST00000589990 IGHV1-58A0A0C4DH39 117 aa7.65□□□□□ -1.18
PRKCSH-210ENST00000589990 H0Y9J4 135 aa7.65□□□□□ -1.18
PRKCSH-210ENST00000589990 RAB5BP61020 215 aa7.65□□□□□ -1.18
PRKCSH-210ENST00000589990 SS18Q15532 418 aa7.65□□□□□ -1.18
PRKCSH-210ENST00000589990 Q6ZUT4 128 aa7.65□□□□□ -1.18
PRKCSH-210ENST00000589990 DIRC1Q969H9 104 aa7.65□□□□□ -1.18
PRKCSH-210ENST00000589990 LOC107984640A0A0U1RRK4 108 aa7.64□□□□□ -1.19
PRKCSH-210ENST00000589990 LINC00959A0A1B0GUT2 108 aa7.64□□□□□ -1.19
PRKCSH-210ENST00000589990 BAGE3Q86Y29 109 aa7.64□□□□□ -1.19
PRKCSH-210ENST00000589990 PYGO1Q9Y3Y4 419 aa7.64□□□□□ -1.19
PRKCSH-210ENST00000589990 MUC17Q685J3 4493 aa7.64□□□□□ -1.19
PRKCSH-210ENST00000589990 IGLV4-69A0A075B6H9 119 aa7.63□□□□□ -1.19
PRKCSH-210ENST00000589990 TRAV13-1A0A0B4J241 112 aa7.63□□□□□ -1.19
PRKCSH-210ENST00000589990 LINC01546A6NGU7 62 aa7.63□□□□□ -1.19
PRKCSH-210ENST00000589990 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.63□□□□□ -1.19
PRKCSH-210ENST00000589990 ZNF561-AS1K7EIQ3 104 aa7.63□□□□□ -1.19
PRKCSH-210ENST00000589990 MRPS36P82909 103 aaKnown RBP7.63□□□□□ -1.19
PRKCSH-210ENST00000589990 TOMM6Q96B49 74 aa7.63□□□□□ -1.19
PRKCSH-210ENST00000589990 URB1-AS1Q96HZ7 61 aa7.63□□□□□ -1.19
PRKCSH-210ENST00000589990 SCGB3A1Q96QR1 104 aa7.63□□□□□ -1.19
PRKCSH-210ENST00000589990 FSIP2Q5CZC0 6907 aa7.63□□□□□ -1.19
PRKCSH-210ENST00000589990 IGLV1-50A0A075B6I6 118 aa7.62□□□□□ -1.19
PRKCSH-210ENST00000589990 IGLV4-3A0A075B6K6 122 aa7.62□□□□□ -1.19
PRKCSH-210ENST00000589990 C1orf196B1AJZ1 125 aa7.62□□□□□ -1.19
PRKCSH-210ENST00000589990 Q6ZN92 141 aa7.62□□□□□ -1.19
PRKCSH-210ENST00000589990 FAM104AQ969W3 186 aa7.62□□□□□ -1.19
PRKCSH-210ENST00000589990 TMEM141Q96I45 108 aa7.62□□□□□ -1.19
PRKCSH-210ENST00000589990 VCX2Q9H322 139 aa7.62□□□□□ -1.19
PRKCSH-210ENST00000589990 PKIGQ9Y2B9 76 aa7.62□□□□□ -1.19
PRKCSH-210ENST00000589990 FAM168BA1KXE4 195 aa7.61□□□□□ -1.19
PRKCSH-210ENST00000589990 LINC01549A6NIU2 74 aa7.61□□□□□ -1.19
PRKCSH-210ENST00000589990 IGIPA6NJ69 53 aa7.61□□□□□ -1.19
PRKCSH-210ENST00000589990 IFITM10A6NMD0 228 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms