RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 ZFAND2AQ8N6M9 145 aa5.32□□□□□ -1.56
SMAD4-209ENST00000589941 ATP6V0E2Q8NHE4 81 aa5.32□□□□□ -1.56
SMAD4-209ENST00000589941 RAB37Q96AX2 223 aa5.32□□□□□ -1.56
SMAD4-209ENST00000589941 LINC00477Q96M19 166 aa5.32□□□□□ -1.56
SMAD4-209ENST00000589941 METTL26Q96S19 204 aa5.32□□□□□ -1.56
SMAD4-209ENST00000589941 NAA38Q9BRA0 125 aaKnown RBP5.32□□□□□ -1.56
SMAD4-209ENST00000589941 TTTY13Q9BZ97 58 aa5.32□□□□□ -1.56
SMAD4-209ENST00000589941 MYMXA0A1B0GTQ4 84 aa5.31□□□□□ -1.56
SMAD4-209ENST00000589941 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.31□□□□□ -1.56
SMAD4-209ENST00000589941 K7ERJ3 54 aa5.31□□□□□ -1.56
SMAD4-209ENST00000589941 PPP1R17O96001 155 aa5.31□□□□□ -1.56
SMAD4-209ENST00000589941 IGKV3-20P01619 116 aa5.31□□□□□ -1.56
SMAD4-209ENST00000589941 UBE2D1P51668 147 aa5.31□□□□□ -1.56
SMAD4-209ENST00000589941 PRR9Q5T870 116 aa5.31□□□□□ -1.56
SMAD4-209ENST00000589941 RNF182Q8N6D2 247 aa5.31□□□□□ -1.56
SMAD4-209ENST00000589941 RASL10AQ92737 203 aa5.31□□□□□ -1.56
SMAD4-209ENST00000589941 DPH3P1Q9H4G8 78 aa5.31□□□□□ -1.56
SMAD4-209ENST00000589941 NHP2Q9NX24 153 aaKnown RBP5.31□□□□□ -1.56
SMAD4-209ENST00000589941 TRAV21A0A0B4J279 112 aa5.3□□□□□ -1.56
SMAD4-209ENST00000589941 HTN3P15516 51 aa5.3□□□□□ -1.56
SMAD4-209ENST00000589941 LINC00315P59091 139 aa5.3□□□□□ -1.56
SMAD4-209ENST00000589941 MORN3Q6PF18 240 aaPredicted RBP5.3□□□□□ -1.56
SMAD4-209ENST00000589941 SPXQ9BT56 116 aa5.3□□□□□ -1.56
SMAD4-209ENST00000589941 KIF25-AS1Q9Y6Z4 181 aa5.3□□□□□ -1.56
SMAD4-209ENST00000589941 IGKV3-7A0A075B6H7 116 aa5.29□□□□□ -1.56
SMAD4-209ENST00000589941 J3QR89 54 aa5.29□□□□□ -1.56
SMAD4-209ENST00000589941 NDUFA4O00483 81 aa5.29□□□□□ -1.56
SMAD4-209ENST00000589941 DNAH10OSP0CZ25 163 aa5.29□□□□□ -1.56
SMAD4-209ENST00000589941 BAALCQ8WXS3 180 aa5.29□□□□□ -1.56
SMAD4-209ENST00000589941 LINC01600Q96MT4 127 aa5.29□□□□□ -1.56
SMAD4-209ENST00000589941 TRBV6-5A0A0K0K1A5 114 aa5.28□□□□□ -1.56
SMAD4-209ENST00000589941 H3BVH4 76 aa5.28□□□□□ -1.56
SMAD4-209ENST00000589941 M0QXV9 152 aa5.28□□□□□ -1.56
SMAD4-209ENST00000589941 UBE2D3P61077 147 aa5.28□□□□□ -1.56
SMAD4-209ENST00000589941 UBE2D2P62837 147 aa5.28□□□□□ -1.56
SMAD4-209ENST00000589941 WFDC2Q14508 124 aa5.28□□□□□ -1.56
SMAD4-209ENST00000589941 SPANXN1Q5VSR9 72 aa5.28□□□□□ -1.56
SMAD4-209ENST00000589941 SAMD13Q5VXD3 122 aa5.28□□□□□ -1.56
SMAD4-209ENST00000589941 Q6ZRN7 208 aaPredicted RBP5.28□□□□□ -1.56
SMAD4-209ENST00000589941 CSNK1G2-AS1Q8NCQ2 148 aa5.28□□□□□ -1.56
SMAD4-209ENST00000589941 SCGB3A1Q96QR1 104 aa5.28□□□□□ -1.56
SMAD4-209ENST00000589941 SIGMAR1Q99720 223 aa5.28□□□□□ -1.56
SMAD4-209ENST00000589941 IGLV4-69A0A075B6H9 119 aa5.27□□□□□ -1.57
SMAD4-209ENST00000589941 TRAV26-2A0A0B4J265 109 aa5.27□□□□□ -1.57
SMAD4-209ENST00000589941 IGIPA6NJ69 53 aa5.27□□□□□ -1.57
SMAD4-209ENST00000589941 KLLNB2CW77 178 aa5.27□□□□□ -1.57
SMAD4-209ENST00000589941 H3BMG7 143 aa5.27□□□□□ -1.57
SMAD4-209ENST00000589941 RNASE3P12724 160 aaKnown RBP5.27□□□□□ -1.57
SMAD4-209ENST00000589941 POLR2KP53803 58 aaKnown RBP5.27□□□□□ -1.57
SMAD4-209ENST00000589941 CFAP126Q5VTH2 177 aa5.27□□□□□ -1.57
SMAD4-209ENST00000589941 C2orf66Q6UXQ4 117 aa5.27□□□□□ -1.57
SMAD4-209ENST00000589941 TRPT1Q86TN4 253 aaKnown RBP5.27□□□□□ -1.57
SMAD4-209ENST00000589941 TMEM141Q96I45 108 aa5.27□□□□□ -1.57
SMAD4-209ENST00000589941 ODF3Q96PU9 254 aa5.27□□□□□ -1.57
SMAD4-209ENST00000589941 HIST1H4GQ99525 98 aa5.27□□□□□ -1.57
SMAD4-209ENST00000589941 TIMM17AQ99595 171 aa5.27□□□□□ -1.57
SMAD4-209ENST00000589941 PRADC1Q9BSG0 188 aa5.27□□□□□ -1.57
SMAD4-209ENST00000589941 UFC1Q9Y3C8 167 aa5.27□□□□□ -1.57
SMAD4-209ENST00000589941 LINC00588Q9Y4M8 146 aa5.27□□□□□ -1.57
SMAD4-209ENST00000589941 IGHV3-49A0A0A0MS15 119 aa5.26□□□□□ -1.57
SMAD4-209ENST00000589941 TSHBP01222 138 aa5.26□□□□□ -1.57
SMAD4-209ENST00000589941 CRYGDP07320 174 aa5.26□□□□□ -1.57
SMAD4-209ENST00000589941 AZU1P20160 251 aa5.26□□□□□ -1.57
SMAD4-209ENST00000589941 EMP1P54849 157 aa5.26□□□□□ -1.57
SMAD4-209ENST00000589941 RPL24P83731 157 aaKnown RBP5.26□□□□□ -1.57
SMAD4-209ENST00000589941 Q6ZQT7 251 aa5.26□□□□□ -1.57
SMAD4-209ENST00000589941 C15orf53Q8NAA6 179 aa5.26□□□□□ -1.57
SMAD4-209ENST00000589941 OR10J6PQ8NGY7 276 aa5.26□□□□□ -1.57
SMAD4-209ENST00000589941 AMELXQ99217 191 aa5.26□□□□□ -1.57
SMAD4-209ENST00000589941 A0A0J9YY99 117 aa5.25□□□□□ -1.57
SMAD4-209ENST00000589941 TRBV27A0A0K0K1C4 114 aa5.25□□□□□ -1.57
SMAD4-209ENST00000589941 C11orf86A6NJI1 115 aa5.25□□□□□ -1.57
SMAD4-209ENST00000589941 MT3P25713 68 aa5.25□□□□□ -1.57
SMAD4-209ENST00000589941 DEFB131AP59861 70 aa5.25□□□□□ -1.57
SMAD4-209ENST00000589941 KRTAP10-4P60372 401 aaPredicted RBP5.25□□□□□ -1.57
SMAD4-209ENST00000589941 LYRM7Q5U5X0 104 aa5.25□□□□□ -1.57
SMAD4-209ENST00000589941 NFE4Q86UQ8 179 aa5.25□□□□□ -1.57
SMAD4-209ENST00000589941 DEFB104AQ8WTQ1 72 aa5.25□□□□□ -1.57
SMAD4-209ENST00000589941 RPL39LQ96EH5 51 aaKnown RBP5.25□□□□□ -1.57
SMAD4-209ENST00000589941 DAZ1Q9NQZ3 744 aaKnown RBP5.25□□□□□ -1.57
SMAD4-209ENST00000589941 CYSLTR1Q9Y271 337 aa5.25□□□□□ -1.57
SMAD4-209ENST00000589941 IGHV3OR16-13A0A075B7E8 117 aa5.24□□□□□ -1.57
SMAD4-209ENST00000589941 IGHV3-74A0A0B4J1X5 117 aa5.24□□□□□ -1.57
SMAD4-209ENST00000589941 IGHV3-66A0A0C4DH42 116 aa5.24□□□□□ -1.57
SMAD4-209ENST00000589941 A0A0J9YX75 114 aa5.24□□□□□ -1.57
SMAD4-209ENST00000589941 KNCNA6PVL3 124 aa5.24□□□□□ -1.57
SMAD4-209ENST00000589941 ZNF815PA8K554 130 aa5.24□□□□□ -1.57
SMAD4-209ENST00000589941 K7EMT4 169 aa5.24□□□□□ -1.57
SMAD4-209ENST00000589941 TSPAN13O95857 204 aa5.24□□□□□ -1.57
SMAD4-209ENST00000589941 HERVK_113P61574 105 aa5.24□□□□□ -1.57
SMAD4-209ENST00000589941 PMVKQ15126 192 aa5.24□□□□□ -1.57
SMAD4-209ENST00000589941 RHOHQ15669 191 aa5.24□□□□□ -1.57
SMAD4-209ENST00000589941 ETDBQ3ZM63 59 aa5.24□□□□□ -1.57
SMAD4-209ENST00000589941 ZNF876PQ49A33 203 aa5.24□□□□□ -1.57
SMAD4-209ENST00000589941 SLC25A29Q8N8R3 303 aa5.24□□□□□ -1.57
SMAD4-209ENST00000589941 C9orf85Q96MD7 179 aa5.24□□□□□ -1.57
SMAD4-209ENST00000589941 VCX2Q9H322 139 aa5.24□□□□□ -1.57
SMAD4-209ENST00000589941 TRBV20-1A0A075B6N2 111 aa5.23□□□□□ -1.57
SMAD4-209ENST00000589941 DUSP14O95147 198 aaKnown RBP5.23□□□□□ -1.57
SMAD4-209ENST00000589941 OXTP01178 125 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms