RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 PHF5AQ7RTV0 110 aaKnown RBP9.16□□□□□ -0.94
SF3A2-204ENST00000589118 MRPL52Q86TS9 123 aaKnown RBP9.16□□□□□ -0.94
SF3A2-204ENST00000589118 C20orf78Q9BR46 151 aa9.16□□□□□ -0.94
SF3A2-204ENST00000589118 SMCO4Q9NRQ5 59 aa9.16□□□□□ -0.94
SF3A2-204ENST00000589118 SMKR1H3BMG3 65 aa9.15□□□□□ -0.94
SF3A2-204ENST00000589118 MT-ND6P03923 174 aa9.15□□□□□ -0.94
SF3A2-204ENST00000589118 PRR4Q16378 134 aa9.15□□□□□ -0.94
SF3A2-204ENST00000589118 COX19Q49B96 90 aa9.15□□□□□ -0.94
SF3A2-204ENST00000589118 IGHV1-58A0A0C4DH39 117 aa9.14□□□□□ -0.95
SF3A2-204ENST00000589118 LINC00959A0A1B0GUT2 108 aa9.14□□□□□ -0.95
SF3A2-204ENST00000589118 PPBPP02775 128 aa9.14□□□□□ -0.95
SF3A2-204ENST00000589118 C9orf116Q5BN46 136 aaPredicted RBP9.14□□□□□ -0.95
SF3A2-204ENST00000589118 KRTAP11-1Q8IUC1 163 aa9.14□□□□□ -0.95
SF3A2-204ENST00000589118 ZNF664Q8N3J9 261 aa9.14□□□□□ -0.95
SF3A2-204ENST00000589118 TCAPO15273 167 aa9.13□□□□□ -0.95
SF3A2-204ENST00000589118 CKS2P33552 79 aa9.13□□□□□ -0.95
SF3A2-204ENST00000589118 OR5A1Q8NGJ0 315 aa9.13□□□□□ -0.95
SF3A2-204ENST00000589118 KIR2DL4Q99706 377 aa9.13□□□□□ -0.95
SF3A2-204ENST00000589118 CSDC2Q9Y534 153 aaKnown RBP9.13□□□□□ -0.95
SF3A2-204ENST00000589118 IGLV4-69A0A075B6H9 119 aa9.12□□□□□ -0.95
SF3A2-204ENST00000589118 ZNF561-AS1K7EIQ3 104 aa9.12□□□□□ -0.95
SF3A2-204ENST00000589118 TNFRSF6BO95407 300 aa9.12□□□□□ -0.95
SF3A2-204ENST00000589118 LCE2AQ5TA79 106 aaPredicted RBP9.12□□□□□ -0.95
SF3A2-204ENST00000589118 CBLN2Q8IUK8 224 aa9.12□□□□□ -0.95
SF3A2-204ENST00000589118 LOC107984640A0A0U1RRK4 108 aa9.11□□□□□ -0.95
SF3A2-204ENST00000589118 D6R8Y8 96 aa9.11□□□□□ -0.95
SF3A2-204ENST00000589118 FCER1GP30273 86 aa9.11□□□□□ -0.95
SF3A2-204ENST00000589118 TMEM101Q96IK0 257 aa9.11□□□□□ -0.95
SF3A2-204ENST00000589118 OPRPNQ99935 248 aaPredicted RBP9.11□□□□□ -0.95
SF3A2-204ENST00000589118 CDC42SE2Q9NRR3 84 aa9.11□□□□□ -0.95
SF3A2-204ENST00000589118 TGIF2-C20orf24A0A0A6YYL0 155 aa9.1□□□□□ -0.95
SF3A2-204ENST00000589118 PRSS47A8MTI9 375 aa9.1□□□□□ -0.95
SF3A2-204ENST00000589118 SMAGPQ0VAQ4 97 aa9.1□□□□□ -0.95
SF3A2-204ENST00000589118 TIMM21Q9BVV7 248 aa9.1□□□□□ -0.95
SF3A2-204ENST00000589118 SMIM2Q9BVW6 85 aa9.1□□□□□ -0.95
SF3A2-204ENST00000589118 NPYP01303 97 aa9.09□□□□□ -0.95
SF3A2-204ENST00000589118 IGLV7-43P04211 117 aa9.09□□□□□ -0.95
SF3A2-204ENST00000589118 TMEM136Q6ZRR5 245 aa9.09□□□□□ -0.95
SF3A2-204ENST00000589118 ORMDL3Q8N138 153 aa9.09□□□□□ -0.95
SF3A2-204ENST00000589118 GNB1LQ9BYB4 327 aa9.09□□□□□ -0.95
SF3A2-204ENST00000589118 LAMTOR2Q9Y2Q5 125 aa9.09□□□□□ -0.95
SF3A2-204ENST00000589118 UBE2D4Q9Y2X8 147 aa9.09□□□□□ -0.95
SF3A2-204ENST00000589118 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.08□□□□□ -0.96
SF3A2-204ENST00000589118 RPL18AQ02543 176 aaKnown RBP9.08□□□□□ -0.96
SF3A2-204ENST00000589118 TMEM18Q96B42 140 aa9.08□□□□□ -0.96
SF3A2-204ENST00000589118 FAM168BA1KXE4 195 aa9.07□□□□□ -0.96
SF3A2-204ENST00000589118 PKIGQ9Y2B9 76 aa9.07□□□□□ -0.96
SF3A2-204ENST00000589118 KRTAP1-4P0C5Y4 121 aa9.06□□□□□ -0.96
SF3A2-204ENST00000589118 SS18Q15532 418 aa9.06□□□□□ -0.96
SF3A2-204ENST00000589118 CD164L2Q6UWJ8 174 aa9.06□□□□□ -0.96
SF3A2-204ENST00000589118 DIRC1Q969H9 104 aa9.06□□□□□ -0.96
SF3A2-204ENST00000589118 PRELID3AQ96N28 172 aa9.06□□□□□ -0.96
SF3A2-204ENST00000589118 YPEL4Q96NS1 127 aa9.06□□□□□ -0.96
SF3A2-204ENST00000589118 CAMK2N2Q96S95 79 aa9.06□□□□□ -0.96
SF3A2-204ENST00000589118 MRPL18Q9H0U6 180 aaKnown RBP9.06□□□□□ -0.96
SF3A2-204ENST00000589118 A0A087WZ39 114 aa9.05□□□□□ -0.96
SF3A2-204ENST00000589118 H0Y9J4 135 aa9.05□□□□□ -0.96
SF3A2-204ENST00000589118 SCO1O75880 301 aa9.05□□□□□ -0.96
SF3A2-204ENST00000589118 FABP9Q0Z7S8 132 aa9.05□□□□□ -0.96
SF3A2-204ENST00000589118 RNASE13Q5GAN3 156 aaKnown RBP9.05□□□□□ -0.96
SF3A2-204ENST00000589118 TRAPPC1Q9Y5R8 145 aa9.05□□□□□ -0.96
SF3A2-204ENST00000589118 A0A0U1RQV1 116 aa9.04□□□□□ -0.96
SF3A2-204ENST00000589118 APOMO95445 188 aa9.04□□□□□ -0.96
SF3A2-204ENST00000589118 SPANXA1Q9NS26 97 aa9.04□□□□□ -0.96
SF3A2-204ENST00000589118 C1orf196B1AJZ1 125 aa9.03□□□□□ -0.96
SF3A2-204ENST00000589118 TSPAN13O95857 204 aa9.03□□□□□ -0.96
SF3A2-204ENST00000589118 MALP21145 153 aa9.03□□□□□ -0.96
SF3A2-204ENST00000589118 MRPS36P82909 103 aaKnown RBP9.03□□□□□ -0.96
SF3A2-204ENST00000589118 C5orf38Q86SI9 138 aa9.03□□□□□ -0.96
SF3A2-204ENST00000589118 FAM104AQ969W3 186 aa9.03□□□□□ -0.96
SF3A2-204ENST00000589118 MAP1LC3AQ9H492 121 aa9.03□□□□□ -0.96
SF3A2-204ENST00000589118 KIAA1644Q3SXP7 199 aa9.02□□□□□ -0.97
SF3A2-204ENST00000589118 K7EMI3 77 aa9.01□□□□□ -0.97
SF3A2-204ENST00000589118 RAB5AP20339 215 aa9.01□□□□□ -0.97
SF3A2-204ENST00000589118 RPL39P62891 51 aaKnown RBP9.01□□□□□ -0.97
SF3A2-204ENST00000589118 Q6ZUT4 128 aa9.01□□□□□ -0.97
SF3A2-204ENST00000589118 PYGO1Q9Y3Y4 419 aa9.01□□□□□ -0.97
SF3A2-204ENST00000589118 IGLV1-50A0A075B6I6 118 aa9□□□□□ -0.97
SF3A2-204ENST00000589118 COLCA2A8K830 154 aa9□□□□□ -0.97
SF3A2-204ENST00000589118 COX7A2LO14548 114 aa9□□□□□ -0.97
SF3A2-204ENST00000589118 FAM19A5Q7Z5A7 132 aaPredicted RBP9□□□□□ -0.97
SF3A2-204ENST00000589118 KRTAP7-1Q8IUC3 87 aa9□□□□□ -0.97
SF3A2-204ENST00000589118 Q8N8P6 123 aa9□□□□□ -0.97
SF3A2-204ENST00000589118 UBE2D1P51668 147 aa8.99□□□□□ -0.97
SF3A2-204ENST00000589118 TRAV13-1A0A0B4J241 112 aa8.98□□□□□ -0.97
SF3A2-204ENST00000589118 NPSP0C0P6 89 aa8.98□□□□□ -0.97
SF3A2-204ENST00000589118 C10orf25Q5T742 122 aa8.98□□□□□ -0.97
SF3A2-204ENST00000589118 ALKBH7Q9BT30 221 aaPredicted RBP8.98□□□□□ -0.97
SF3A2-204ENST00000589118 NXT2Q9NPJ8 142 aaKnown RBP8.98□□□□□ -0.97
SF3A2-204ENST00000589118 LOC389332A0A1B0GUA5 103 aa8.97□□□□□ -0.97
SF3A2-204ENST00000589118 SPAG11BQ08648 103 aa8.97□□□□□ -0.97
SF3A2-204ENST00000589118 ORMDL2Q53FV1 153 aa8.97□□□□□ -0.97
SF3A2-204ENST00000589118 C2orf48Q96LS8 159 aa8.97□□□□□ -0.97
SF3A2-204ENST00000589118 MUC17Q685J3 4493 aa8.97□□□□□ -0.97
SF3A2-204ENST00000589118 IFI27P40305 119 aaPredicted RBP8.96□□□□□ -0.98
SF3A2-204ENST00000589118 TRGC2P03986 189 aa8.95□□□□□ -0.98
SF3A2-204ENST00000589118 GAGE2EQ4V326 116 aa8.95□□□□□ -0.98
SF3A2-204ENST00000589118 GAGE2DQ9UEU5 116 aa8.95□□□□□ -0.98
SF3A2-204ENST00000589118 CYSLTR1Q9Y271 337 aa8.95□□□□□ -0.98
SF3A2-204ENST00000589118 IGLV4-3A0A075B6K6 122 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms