RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 LINC01620Q4KN68 170 aa7.62□□□□□ -1.19
RFX1-204ENST00000588885 MPV17L2Q567V2 206 aa7.62□□□□□ -1.19
RFX1-204ENST00000588885 Q8N976 141 aa7.62□□□□□ -1.19
RFX1-204ENST00000588885 PACRGQ96M98 296 aaPredicted RBP7.62□□□□□ -1.19
RFX1-204ENST00000588885 FAM30AQ9NZY2 134 aa7.62□□□□□ -1.19
RFX1-204ENST00000588885 UBE2D4Q9Y2X8 147 aa7.62□□□□□ -1.19
RFX1-204ENST00000588885 HERC1Q15751 4861 aa7.61□□□□□ -1.19
RFX1-204ENST00000588885 UBE2L6O14933 153 aa7.61□□□□□ -1.19
RFX1-204ENST00000588885 FGF6P10767 208 aa7.61□□□□□ -1.19
RFX1-204ENST00000588885 ENHOQ6UWT2 76 aa7.61□□□□□ -1.19
RFX1-204ENST00000588885 Q6ZUT4 128 aa7.61□□□□□ -1.19
RFX1-204ENST00000588885 SCGB3A1Q96QR1 104 aa7.61□□□□□ -1.19
RFX1-204ENST00000588885 COX11Q9Y6N1 276 aa7.61□□□□□ -1.19
RFX1-204ENST00000588885 SRRM2Q9UQ35 2752 aaKnown RBP7.6□□□□□ -1.19
RFX1-204ENST00000588885 LOC105371267A0A1B0GV96 52 aa7.6□□□□□ -1.19
RFX1-204ENST00000588885 FAM229AH3BQW9 127 aa7.6□□□□□ -1.19
RFX1-204ENST00000588885 CLPSL2Q6UWE3 100 aa7.6□□□□□ -1.19
RFX1-204ENST00000588885 OR10D4PQ8NGN7 298 aa7.6□□□□□ -1.19
RFX1-204ENST00000588885 TIMM17AQ99595 171 aa7.6□□□□□ -1.19
RFX1-204ENST00000588885 HSPB8Q9UJY1 196 aa7.6□□□□□ -1.19
RFX1-204ENST00000588885 IGLV4-3A0A075B6K6 122 aa7.59□□□□□ -1.19
RFX1-204ENST00000588885 IGIPA6NJ69 53 aa7.59□□□□□ -1.19
RFX1-204ENST00000588885 ATP5LO75964 103 aa7.59□□□□□ -1.19
RFX1-204ENST00000588885 CRPP02741 224 aa7.59□□□□□ -1.19
RFX1-204ENST00000588885 C3orf79P0CE67 100 aa7.59□□□□□ -1.19
RFX1-204ENST00000588885 G0S2P27469 103 aa7.59□□□□□ -1.19
RFX1-204ENST00000588885 KRTDAPP60985 99 aa7.59□□□□□ -1.19
RFX1-204ENST00000588885 RBX1P62877 108 aa7.59□□□□□ -1.19
RFX1-204ENST00000588885 RNASE13Q5GAN3 156 aaKnown RBP7.59□□□□□ -1.19
RFX1-204ENST00000588885 ZC2HC1BQ5TFG8 222 aa7.59□□□□□ -1.19
RFX1-204ENST00000588885 MRPL52Q86TS9 123 aaKnown RBP7.59□□□□□ -1.19
RFX1-204ENST00000588885 FAM104AQ969W3 186 aa7.59□□□□□ -1.19
RFX1-204ENST00000588885 IFI27L1Q96BM0 104 aa7.59□□□□□ -1.19
RFX1-204ENST00000588885 OPRPNQ99935 248 aaPredicted RBP7.59□□□□□ -1.19
RFX1-204ENST00000588885 C1orf43Q9BWL3 253 aa7.59□□□□□ -1.19
RFX1-204ENST00000588885 SPANXA1Q9NS26 97 aa7.59□□□□□ -1.19
RFX1-204ENST00000588885 H0Y8G0 127 aa7.58□□□□□ -1.2
RFX1-204ENST00000588885 H7C423 109 aa7.58□□□□□ -1.2
RFX1-204ENST00000588885 AMMECR1LQ6DCA0 310 aa7.58□□□□□ -1.2
RFX1-204ENST00000588885 ERASQ7Z444 233 aa7.58□□□□□ -1.2
RFX1-204ENST00000588885 LINC00269Q8N2A0 174 aa7.58□□□□□ -1.2
RFX1-204ENST00000588885 TMEM141Q96I45 108 aa7.58□□□□□ -1.2
RFX1-204ENST00000588885 TIMM21Q9BVV7 248 aa7.58□□□□□ -1.2
RFX1-204ENST00000588885 PYGO1Q9Y3Y4 419 aa7.58□□□□□ -1.2
RFX1-204ENST00000588885 IGLV4-60A0A075B6I1 120 aa7.57□□□□□ -1.2
RFX1-204ENST00000588885 LINC01549A6NIU2 74 aa7.57□□□□□ -1.2
RFX1-204ENST00000588885 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.57□□□□□ -1.2
RFX1-204ENST00000588885 AKR1D1P51857 326 aa7.57□□□□□ -1.2
RFX1-204ENST00000588885 PKIAP61925 76 aa7.57□□□□□ -1.2
RFX1-204ENST00000588885 Q6ZN92 141 aa7.57□□□□□ -1.2
RFX1-204ENST00000588885 OR5A1Q8NGJ0 315 aa7.57□□□□□ -1.2
RFX1-204ENST00000588885 MYCBP2O75592 4640 aa7.57□□□□□ -1.2
RFX1-204ENST00000588885 SYS1-DBNDD2H3BUS1 97 aa7.56□□□□□ -1.2
RFX1-204ENST00000588885 ZNF25P17030 456 aaPredicted RBP7.56□□□□□ -1.2
RFX1-204ENST00000588885 MAP1LC3CQ9BXW4 147 aa7.56□□□□□ -1.2
RFX1-204ENST00000588885 DMBT1Q9UGM3 2413 aaPredicted RBP7.55□□□□□ -1.2
RFX1-204ENST00000588885 IGLV10-54A0A075B6I4 117 aa7.55□□□□□ -1.2
RFX1-204ENST00000588885 USP17L23D6RBM5 183 aa7.55□□□□□ -1.2
RFX1-204ENST00000588885 MRPS36P82909 103 aaKnown RBP7.55□□□□□ -1.2
RFX1-204ENST00000588885 SMAGPQ0VAQ4 97 aa7.55□□□□□ -1.2
RFX1-204ENST00000588885 DGAT2L7PQ6IED9 249 aa7.55□□□□□ -1.2
RFX1-204ENST00000588885 TMEM101Q96IK0 257 aa7.55□□□□□ -1.2
RFX1-204ENST00000588885 PMCHL2Q9BQD1 86 aa7.55□□□□□ -1.2
RFX1-204ENST00000588885 PRSS1P07477 247 aa7.54□□□□□ -1.2
RFX1-204ENST00000588885 NPSP0C0P6 89 aa7.54□□□□□ -1.2
RFX1-204ENST00000588885 ODF1Q14990 250 aa7.54□□□□□ -1.2
RFX1-204ENST00000588885 MIAQ16674 131 aa7.54□□□□□ -1.2
RFX1-204ENST00000588885 TEX43Q6ZNM6 134 aa7.54□□□□□ -1.2
RFX1-204ENST00000588885 AMELXQ99217 191 aa7.54□□□□□ -1.2
RFX1-204ENST00000588885 CDC42SE2Q9NRR3 84 aa7.54□□□□□ -1.2
RFX1-204ENST00000588885 PRR34Q9NV39 138 aa7.54□□□□□ -1.2
RFX1-204ENST00000588885 CSDC2Q9Y534 153 aaKnown RBP7.54□□□□□ -1.2
RFX1-204ENST00000588885 FLG2Q5D862 2391 aaPredicted RBP7.53□□□□□ -1.2
RFX1-204ENST00000588885 TRAV12-1A0A0B4J245 112 aa7.53□□□□□ -1.2
RFX1-204ENST00000588885 REG3AQ06141 175 aa7.53□□□□□ -1.2
RFX1-204ENST00000588885 PMVKQ15126 192 aa7.53□□□□□ -1.2
RFX1-204ENST00000588885 PET117Q6UWS5 81 aa7.53□□□□□ -1.2
RFX1-204ENST00000588885 ZNF664Q8N3J9 261 aa7.53□□□□□ -1.2
RFX1-204ENST00000588885 IGKV3OR2-268A0A0C4DH90 116 aa7.52□□□□□ -1.21
RFX1-204ENST00000588885 A0A1B0GUV1 79 aa7.52□□□□□ -1.21
RFX1-204ENST00000588885 C14orf177Q52M58 125 aa7.52□□□□□ -1.21
RFX1-204ENST00000588885 PYY3Q5JQD4 70 aa7.52□□□□□ -1.21
RFX1-204ENST00000588885 PAPPA-AS1Q5QFB9 102 aa7.52□□□□□ -1.21
RFX1-204ENST00000588885 LINC01545Q5VT33 79 aa7.52□□□□□ -1.21
RFX1-204ENST00000588885 VCX2Q9H322 139 aa7.52□□□□□ -1.21
RFX1-204ENST00000588885 CST9LQ9H4G1 147 aa7.52□□□□□ -1.21
RFX1-204ENST00000588885 MRPL35Q9NZE8 188 aaKnown RBP7.52□□□□□ -1.21
RFX1-204ENST00000588885 IGLV4-69A0A075B6H9 119 aa7.51□□□□□ -1.21
RFX1-204ENST00000588885 C20orf202A1L168 122 aa7.51□□□□□ -1.21
RFX1-204ENST00000588885 PLA2G1BP04054 148 aaKnown RBP7.51□□□□□ -1.21
RFX1-204ENST00000588885 UBE2D1P51668 147 aa7.51□□□□□ -1.21
RFX1-204ENST00000588885 KRTAP26-1Q6PEX3 210 aa7.51□□□□□ -1.21
RFX1-204ENST00000588885 Q6ZSA8 131 aa7.51□□□□□ -1.21
RFX1-204ENST00000588885 C2orf88Q9BSF0 95 aa7.51□□□□□ -1.21
RFX1-204ENST00000588885 CHTOPQ9Y3Y2 248 aaKnown RBP7.51□□□□□ -1.21
RFX1-204ENST00000588885 TRAV13-1A0A0B4J241 112 aa7.5□□□□□ -1.21
RFX1-204ENST00000588885 F8VRH5 84 aa7.5□□□□□ -1.21
RFX1-204ENST00000588885 SCGB1D1O95968 90 aa7.5□□□□□ -1.21
RFX1-204ENST00000588885 JOSD1Q15040 202 aaPredicted RBP7.5□□□□□ -1.21
RFX1-204ENST00000588885 SCXQ7RTU7 201 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms