RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 C5orf38Q86SI9 138 aa12.03□□□□□ -0.48
CCDC130-209ENST00000588809 OPRPNQ99935 248 aaPredicted RBP12.03□□□□□ -0.48
CCDC130-209ENST00000588809 LOC107984640A0A0U1RRK4 108 aa12.02□□□□□ -0.49
CCDC130-209ENST00000588809 RAB5AP20339 215 aa12.02□□□□□ -0.49
CCDC130-209ENST00000588809 PRR3P79522 188 aaKnown RBP12.02□□□□□ -0.49
CCDC130-209ENST00000588809 CAMK2N2Q96S95 79 aa12.02□□□□□ -0.49
CCDC130-209ENST00000588809 PYGO1Q9Y3Y4 419 aa12.02□□□□□ -0.49
CCDC130-209ENST00000588809 TNXBP22105 4242 aa12.01□□□□□ -0.49
CCDC130-209ENST00000588809 OR10D4PQ8NGN7 298 aa12.01□□□□□ -0.49
CCDC130-209ENST00000588809 MT1HL1P0DM35 61 aa12□□□□□ -0.49
CCDC130-209ENST00000588809 IFI27P40305 119 aaPredicted RBP12□□□□□ -0.49
CCDC130-209ENST00000588809 IFITM10A6NMD0 228 aa11.99□□□□□ -0.49
CCDC130-209ENST00000588809 SPAG11BQ08648 103 aa11.99□□□□□ -0.49
CCDC130-209ENST00000588809 MAP1LC3AQ9H492 121 aa11.99□□□□□ -0.49
CCDC130-209ENST00000588809 F8WDY8 70 aa11.98□□□□□ -0.49
CCDC130-209ENST00000588809 RNF151Q2KHN1 245 aa11.98□□□□□ -0.49
CCDC130-209ENST00000588809 IGLV4-3A0A075B6K6 122 aa11.97□□□□□ -0.49
CCDC130-209ENST00000588809 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.97□□□□□ -0.49
CCDC130-209ENST00000588809 Q8N8P6 123 aa11.97□□□□□ -0.49
CCDC130-209ENST00000588809 IMMP2LQ96T52 175 aa11.97□□□□□ -0.49
CCDC130-209ENST00000588809 ORAOV1Q8WV07 137 aa11.96□□□□□ -0.49
CCDC130-209ENST00000588809 MRPL35Q9NZE8 188 aaKnown RBP11.96□□□□□ -0.49
CCDC130-209ENST00000588809 LOC389332A0A1B0GUA5 103 aa11.95□□□□□ -0.5
CCDC130-209ENST00000588809 K7EMI3 77 aa11.95□□□□□ -0.5
CCDC130-209ENST00000588809 GAGE2BQ13066 116 aa11.95□□□□□ -0.5
CCDC130-209ENST00000588809 UQCC3Q6UW78 93 aa11.95□□□□□ -0.5
CCDC130-209ENST00000588809 TMEM141Q96I45 108 aa11.95□□□□□ -0.5
CCDC130-209ENST00000588809 A0A087WZ39 114 aa11.94□□□□□ -0.5
CCDC130-209ENST00000588809 TGIF2-C20orf24A0A0A6YYL0 155 aa11.94□□□□□ -0.5
CCDC130-209ENST00000588809 ADCYAP1P18509 176 aa11.94□□□□□ -0.5
CCDC130-209ENST00000588809 LINC00242Q5T6M2 205 aa11.94□□□□□ -0.5
CCDC130-209ENST00000588809 IFITM2Q01629 132 aa11.93□□□□□ -0.5
CCDC130-209ENST00000588809 CYSLTR1Q9Y271 337 aa11.93□□□□□ -0.5
CCDC130-209ENST00000588809 A0A1W2PNN7 141 aa11.92□□□□□ -0.5
CCDC130-209ENST00000588809 NDUFA1O15239 70 aa11.92□□□□□ -0.5
CCDC130-209ENST00000588809 NPSP0C0P6 89 aa11.92□□□□□ -0.5
CCDC130-209ENST00000588809 ORMDL2Q53FV1 153 aa11.92□□□□□ -0.5
CCDC130-209ENST00000588809 C2orf66Q6UXQ4 117 aa11.92□□□□□ -0.5
CCDC130-209ENST00000588809 Q6ZRP5 223 aa11.92□□□□□ -0.5
CCDC130-209ENST00000588809 A0A0J9YXV3 536 aa11.91□□□□□ -0.5
CCDC130-209ENST00000588809 TMEM218A2RU14 115 aa11.91□□□□□ -0.5
CCDC130-209ENST00000588809 UBE2D1P51668 147 aa11.91□□□□□ -0.5
CCDC130-209ENST00000588809 RPL18AQ02543 176 aaKnown RBP11.91□□□□□ -0.5
CCDC130-209ENST00000588809 TEX43Q6ZNM6 134 aa11.91□□□□□ -0.5
CCDC130-209ENST00000588809 LINC00173Q6ZV60 143 aa11.91□□□□□ -0.5
CCDC130-209ENST00000588809 CTDSP1Q9GZU7 261 aa11.91□□□□□ -0.5
CCDC130-209ENST00000588809 TRAV9-1A0A075B6T8 112 aa11.9□□□□□ -0.5
CCDC130-209ENST00000588809 TLX1NBP0CAT3 122 aa11.9□□□□□ -0.5
CCDC130-209ENST00000588809 KIAA0087Q14695 138 aa11.9□□□□□ -0.5
CCDC130-209ENST00000588809 C9orf116Q5BN46 136 aaPredicted RBP11.9□□□□□ -0.5
CCDC130-209ENST00000588809 C10orf25Q5T742 122 aa11.9□□□□□ -0.5
CCDC130-209ENST00000588809 AMELXQ99217 191 aa11.9□□□□□ -0.5
CCDC130-209ENST00000588809 NXT2Q9NPJ8 142 aaKnown RBP11.9□□□□□ -0.5
CCDC130-209ENST00000588809 IGIPA6NJ69 53 aa11.89□□□□□ -0.51
CCDC130-209ENST00000588809 SRSF9Q13242 221 aaKnown RBP eCLIP11.89□□□□□ -0.51
CCDC130-209ENST00000588809 SPINK6Q6UWN8 80 aa11.89□□□□□ -0.51
CCDC130-209ENST00000588809 LINC01561Q8N1V8 128 aa11.89□□□□□ -0.51
CCDC130-209ENST00000588809 LINC01600Q96MT4 127 aa11.89□□□□□ -0.51
CCDC130-209ENST00000588809 C2orf88Q9BSF0 95 aa11.89□□□□□ -0.51
CCDC130-209ENST00000588809 UNQ6190/PRO20217Q6UXQ8 127 aa11.88□□□□□ -0.51
CCDC130-209ENST00000588809 Q6ZN92 141 aa11.88□□□□□ -0.51
CCDC130-209ENST00000588809 C6orf48Q9UBA6 75 aa11.88□□□□□ -0.51
CCDC130-209ENST00000588809 PLA2G2DQ9UNK4 145 aa11.88□□□□□ -0.51
CCDC130-209ENST00000588809 FAM19A3Q7Z5A8 133 aa11.87□□□□□ -0.51
CCDC130-209ENST00000588809 SEC11CQ9BY50 192 aa11.87□□□□□ -0.51
CCDC130-209ENST00000588809 VCX2Q9H322 139 aa11.86□□□□□ -0.51
CCDC130-209ENST00000588809 G0S2P27469 103 aa11.85□□□□□ -0.51
CCDC130-209ENST00000588809 ZC2HC1BQ5TFG8 222 aa11.85□□□□□ -0.51
CCDC130-209ENST00000588809 TRBV30A0A0K0K1B3 111 aa11.84□□□□□ -0.51
CCDC130-209ENST00000588809 TIMM17AQ99595 171 aa11.84□□□□□ -0.51
CCDC130-209ENST00000588809 UBR4Q5T4S7 5183 aa11.84□□□□□ -0.51
CCDC130-209ENST00000588809 KIAA1644Q3SXP7 199 aa11.83□□□□□ -0.52
CCDC130-209ENST00000588809 REG3GQ6UW15 175 aa11.83□□□□□ -0.52
CCDC130-209ENST00000588809 TOMM6Q96B49 74 aa11.83□□□□□ -0.52
CCDC130-209ENST00000588809 PSORS1C2Q9UIG4 136 aa11.83□□□□□ -0.52
CCDC130-209ENST00000588809 PAPPA-AS1Q5QFB9 102 aa11.82□□□□□ -0.52
CCDC130-209ENST00000588809 PHF5AQ7RTV0 110 aaKnown RBP11.82□□□□□ -0.52
CCDC130-209ENST00000588809 GNB1LQ9BYB4 327 aa11.82□□□□□ -0.52
CCDC130-209ENST00000588809 C2orf82Q6UX34 121 aa11.81□□□□□ -0.52
CCDC130-209ENST00000588809 FAM168BA1KXE4 195 aa11.8□□□□□ -0.52
CCDC130-209ENST00000588809 LINC01546A6NGU7 62 aa11.8□□□□□ -0.52
CCDC130-209ENST00000588809 S100PP25815 95 aa11.8□□□□□ -0.52
CCDC130-209ENST00000588809 SEC11AP67812 179 aa11.8□□□□□ -0.52
CCDC130-209ENST00000588809 C10orf91Q5T1B1 145 aa11.8□□□□□ -0.52
CCDC130-209ENST00000588809 NDUFC2-KCTD14E9PQ53 114 aa11.79□□□□□ -0.52
CCDC130-209ENST00000588809 MT-ND6P03923 174 aa11.79□□□□□ -0.52
CCDC130-209ENST00000588809 HERVK_113P63121 156 aa11.79□□□□□ -0.52
CCDC130-209ENST00000588809 ERASQ7Z444 233 aa11.79□□□□□ -0.52
CCDC130-209ENST00000588809 KRTAP10-8P60410 259 aa11.78□□□□□ -0.52
CCDC130-209ENST00000588809 COX19Q49B96 90 aa11.78□□□□□ -0.52
CCDC130-209ENST00000588809 GAGE2EQ4V326 116 aa11.78□□□□□ -0.52
CCDC130-209ENST00000588809 COMMD7Q86VX2 200 aa11.78□□□□□ -0.52
CCDC130-209ENST00000588809 KRTAP7-1Q8IUC3 87 aa11.78□□□□□ -0.52
CCDC130-209ENST00000588809 Q8IZM0 81 aa11.78□□□□□ -0.52
CCDC130-209ENST00000588809 PACRGQ96M98 296 aaPredicted RBP11.78□□□□□ -0.52
CCDC130-209ENST00000588809 ALKBH7Q9BT30 221 aaPredicted RBP11.78□□□□□ -0.52
CCDC130-209ENST00000588809 GAGE2DQ9UEU5 116 aa11.78□□□□□ -0.52
CCDC130-209ENST00000588809 LINC01549A6NIU2 74 aa11.77□□□□□ -0.53
CCDC130-209ENST00000588809 CDKN2A-AS1Q9UH64 79 aa11.77□□□□□ -0.53
CCDC130-209ENST00000588809 CARHSP1Q9Y2V2 147 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms