RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 PRSS3P2Q8NHM4 247 aa6.65□□□□□ -1.34
TPM4-209ENST00000588483 C2orf48Q96LS8 159 aa6.65□□□□□ -1.34
TPM4-209ENST00000588483 OPRPNQ99935 248 aaPredicted RBP6.65□□□□□ -1.34
TPM4-209ENST00000588483 NXT2Q9NPJ8 142 aaKnown RBP6.65□□□□□ -1.34
TPM4-209ENST00000588483 LINC00474Q9P2X8 69 aa6.65□□□□□ -1.34
TPM4-209ENST00000588483 IFITM10A6NMD0 228 aa6.64□□□□□ -1.35
TPM4-209ENST00000588483 KRTAP29-1A8MX34 341 aaPredicted RBP6.64□□□□□ -1.35
TPM4-209ENST00000588483 APOMO95445 188 aa6.64□□□□□ -1.35
TPM4-209ENST00000588483 MALP21145 153 aa6.64□□□□□ -1.35
TPM4-209ENST00000588483 RPL37AP61513 92 aaKnown RBP6.64□□□□□ -1.35
TPM4-209ENST00000588483 COX19Q49B96 90 aa6.64□□□□□ -1.35
TPM4-209ENST00000588483 C2orf66Q6UXQ4 117 aa6.64□□□□□ -1.35
TPM4-209ENST00000588483 GNB1LQ9BYB4 327 aa6.64□□□□□ -1.35
TPM4-209ENST00000588483 CYSLTR1Q9Y271 337 aa6.64□□□□□ -1.35
TPM4-209ENST00000588483 IGLV4-69A0A075B6H9 119 aa6.63□□□□□ -1.35
TPM4-209ENST00000588483 A0A096LNI7 61 aa6.63□□□□□ -1.35
TPM4-209ENST00000588483 LOC389332A0A1B0GUA5 103 aa6.63□□□□□ -1.35
TPM4-209ENST00000588483 F8WDY8 70 aa6.63□□□□□ -1.35
TPM4-209ENST00000588483 S100PP25815 95 aa6.63□□□□□ -1.35
TPM4-209ENST00000588483 RNF151Q2KHN1 245 aa6.63□□□□□ -1.35
TPM4-209ENST00000588483 C5orf38Q86SI9 138 aa6.63□□□□□ -1.35
TPM4-209ENST00000588483 LINC00526Q96FQ7 95 aa6.63□□□□□ -1.35
TPM4-209ENST00000588483 TMEM141Q96I45 108 aa6.63□□□□□ -1.35
TPM4-209ENST00000588483 AMELXQ99217 191 aa6.63□□□□□ -1.35
TPM4-209ENST00000588483 A0A087WZ39 114 aa6.62□□□□□ -1.35
TPM4-209ENST00000588483 LINC01546A6NGU7 62 aa6.62□□□□□ -1.35
TPM4-209ENST00000588483 IGIPA6NJ69 53 aa6.62□□□□□ -1.35
TPM4-209ENST00000588483 MT-ND6P03923 174 aa6.62□□□□□ -1.35
TPM4-209ENST00000588483 G0S2P27469 103 aa6.62□□□□□ -1.35
TPM4-209ENST00000588483 LINC00242Q5T6M2 205 aa6.62□□□□□ -1.35
TPM4-209ENST00000588483 TEX43Q6ZNM6 134 aa6.62□□□□□ -1.35
TPM4-209ENST00000588483 Q6ZRU5 148 aa6.62□□□□□ -1.35
TPM4-209ENST00000588483 LINC00173Q6ZV60 143 aa6.62□□□□□ -1.35
TPM4-209ENST00000588483 FAM19A3Q7Z5A8 133 aa6.62□□□□□ -1.35
TPM4-209ENST00000588483 LINC01561Q8N1V8 128 aa6.62□□□□□ -1.35
TPM4-209ENST00000588483 UBE2D1P51668 147 aa6.61□□□□□ -1.35
TPM4-209ENST00000588483 SPAG11BQ08648 103 aa6.61□□□□□ -1.35
TPM4-209ENST00000588483 MAJINQ3KP22 176 aa6.61□□□□□ -1.35
TPM4-209ENST00000588483 CAMK2N2Q96S95 79 aa6.61□□□□□ -1.35
TPM4-209ENST00000588483 TIMM17AQ99595 171 aa6.61□□□□□ -1.35
TPM4-209ENST00000588483 ALKBH7Q9BT30 221 aaPredicted RBP6.61□□□□□ -1.35
TPM4-209ENST00000588483 MRPL35Q9NZE8 188 aaKnown RBP6.61□□□□□ -1.35
TPM4-209ENST00000588483 TGIF2-C20orf24A0A0A6YYL0 155 aa6.6□□□□□ -1.35
TPM4-209ENST00000588483 IGKV2-24A0A0C4DH68 120 aa6.6□□□□□ -1.35
TPM4-209ENST00000588483 LOC107984640A0A0U1RRK4 108 aa6.6□□□□□ -1.35
TPM4-209ENST00000588483 LINC01549A6NIU2 74 aa6.6□□□□□ -1.35
TPM4-209ENST00000588483 PTTG1IPP53801 180 aa6.6□□□□□ -1.35
TPM4-209ENST00000588483 KIAA1644Q3SXP7 199 aa6.6□□□□□ -1.35
TPM4-209ENST00000588483 Q6ZN92 141 aa6.6□□□□□ -1.35
TPM4-209ENST00000588483 STPG4Q8N801 248 aa6.6□□□□□ -1.35
TPM4-209ENST00000588483 TOMM6Q96B49 74 aa6.6□□□□□ -1.35
TPM4-209ENST00000588483 C2orf88Q9BSF0 95 aa6.6□□□□□ -1.35
TPM4-209ENST00000588483 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.59□□□□□ -1.35
TPM4-209ENST00000588483 OXTP01178 125 aa6.59□□□□□ -1.35
TPM4-209ENST00000588483 HNRNPA3P51991 378 aaKnown RBP6.59□□□□□ -1.35
TPM4-209ENST00000588483 KIAA0087Q14695 138 aa6.59□□□□□ -1.35
TPM4-209ENST00000588483 PAPPA-AS1Q5QFB9 102 aa6.59□□□□□ -1.35
TPM4-209ENST00000588483 ORAOV1Q8WV07 137 aa6.59□□□□□ -1.35
TPM4-209ENST00000588483 DPH3Q96FX2 82 aa6.59□□□□□ -1.35
TPM4-209ENST00000588483 RPS10P5Q9NQ39 176 aa6.59□□□□□ -1.35
TPM4-209ENST00000588483 NDUFA1O15239 70 aa6.58□□□□□ -1.36
TPM4-209ENST00000588483 TLX1NBP0CAT3 122 aa6.58□□□□□ -1.36
TPM4-209ENST00000588483 C7orf33Q8WU49 177 aa6.58□□□□□ -1.36
TPM4-209ENST00000588483 VCX2Q9H322 139 aa6.58□□□□□ -1.36
TPM4-209ENST00000588483 SEC11AP67812 179 aa6.57□□□□□ -1.36
TPM4-209ENST00000588483 ERASQ7Z444 233 aa6.57□□□□□ -1.36
TPM4-209ENST00000588483 SVBPQ8N300 66 aa6.57□□□□□ -1.36
TPM4-209ENST00000588483 MRPL18Q9H0U6 180 aaKnown RBP6.57□□□□□ -1.36
TPM4-209ENST00000588483 SNAPINO95295 136 aa6.56□□□□□ -1.36
TPM4-209ENST00000588483 APOC3P02656 99 aa6.56□□□□□ -1.36
TPM4-209ENST00000588483 HERVK_113P63121 156 aa6.56□□□□□ -1.36
TPM4-209ENST00000588483 ZC2HC1BQ5TFG8 222 aa6.56□□□□□ -1.36
TPM4-209ENST00000588483 TNXBP22105 4242 aa6.55□□□□□ -1.36
TPM4-209ENST00000588483 TRBV30A0A0K0K1B3 111 aa6.55□□□□□ -1.36
TPM4-209ENST00000588483 J3QL48 77 aa6.55□□□□□ -1.36
TPM4-209ENST00000588483 PRR3P79522 188 aaKnown RBP6.55□□□□□ -1.36
TPM4-209ENST00000588483 FABP9Q0Z7S8 132 aa6.55□□□□□ -1.36
TPM4-209ENST00000588483 GAGE2BQ13066 116 aa6.55□□□□□ -1.36
TPM4-209ENST00000588483 NDUFA5Q16718 116 aa6.55□□□□□ -1.36
TPM4-209ENST00000588483 C10orf25Q5T742 122 aa6.55□□□□□ -1.36
TPM4-209ENST00000588483 C6orf48Q9UBA6 75 aa6.55□□□□□ -1.36
TPM4-209ENST00000588483 IGLV5-45A0A087WSX0 123 aa6.54□□□□□ -1.36
TPM4-209ENST00000588483 RPL18AQ02543 176 aaKnown RBP6.54□□□□□ -1.36
TPM4-209ENST00000588483 UNQ6190/PRO20217Q6UXQ8 127 aa6.54□□□□□ -1.36
TPM4-209ENST00000588483 Q8IZM0 81 aa6.54□□□□□ -1.36
TPM4-209ENST00000588483 SCGB3A1Q96QR1 104 aa6.54□□□□□ -1.36
TPM4-209ENST00000588483 A0A0J9YXV3 536 aa6.53□□□□□ -1.36
TPM4-209ENST00000588483 A0A1W2PNN7 141 aa6.53□□□□□ -1.36
TPM4-209ENST00000588483 Q6ZRP5 223 aa6.53□□□□□ -1.36
TPM4-209ENST00000588483 FA2HQ7L5A8 372 aa6.53□□□□□ -1.36
TPM4-209ENST00000588483 C18orf32Q8TCD1 76 aa6.53□□□□□ -1.36
TPM4-209ENST00000588483 YPEL4Q96NS1 127 aa6.53□□□□□ -1.36
TPM4-209ENST00000588483 CDKN2A-AS1Q9UH64 79 aa6.53□□□□□ -1.36
TPM4-209ENST00000588483 A0A096LNJ9 63 aa6.52□□□□□ -1.37
TPM4-209ENST00000588483 TINCRA0A1B0GVN0 87 aa6.52□□□□□ -1.37
TPM4-209ENST00000588483 C9orf116Q5BN46 136 aaPredicted RBP6.52□□□□□ -1.37
TPM4-209ENST00000588483 URB1-AS1Q96HZ7 61 aa6.52□□□□□ -1.37
TPM4-209ENST00000588483 SMCO4Q9NRQ5 59 aa6.52□□□□□ -1.37
TPM4-209ENST00000588483 TRAPPC1Q9Y5R8 145 aa6.52□□□□□ -1.37
TPM4-209ENST00000588483 NDUFC2-KCTD14E9PQ53 114 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms