RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 RMI2Q96E14 147 aa5.55□□□□□ -1.52
SDF2-204ENST00000587338 SCGB3A1Q96QR1 104 aa5.55□□□□□ -1.52
SDF2-204ENST00000587338 CYSLTR1Q9Y271 337 aa5.55□□□□□ -1.52
SDF2-204ENST00000587338 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.54□□□□□ -1.52
SDF2-204ENST00000587338 IGKV2-29A2NJV5 120 aaPredicted RBP5.54□□□□□ -1.52
SDF2-204ENST00000587338 UBE2L6O14933 153 aa5.54□□□□□ -1.52
SDF2-204ENST00000587338 RPL39P62891 51 aaKnown RBP5.54□□□□□ -1.52
SDF2-204ENST00000587338 LINC00173Q6ZV60 143 aa5.54□□□□□ -1.52
SDF2-204ENST00000587338 MAP1LC3CQ9BXW4 147 aa5.54□□□□□ -1.52
SDF2-204ENST00000587338 TRBV25-1A0A075B6N4 114 aa5.53□□□□□ -1.52
SDF2-204ENST00000587338 A0A096LNJ9 63 aa5.53□□□□□ -1.52
SDF2-204ENST00000587338 TMEM262E9PQX1 116 aa5.53□□□□□ -1.52
SDF2-204ENST00000587338 ATP5LO75964 103 aa5.53□□□□□ -1.52
SDF2-204ENST00000587338 PRSS1P07477 247 aa5.53□□□□□ -1.52
SDF2-204ENST00000587338 TMEM97Q5BJF2 176 aa5.53□□□□□ -1.52
SDF2-204ENST00000587338 Q6ZN92 141 aa5.53□□□□□ -1.52
SDF2-204ENST00000587338 Q6ZRU5 148 aa5.53□□□□□ -1.52
SDF2-204ENST00000587338 TOMM6Q96B49 74 aa5.53□□□□□ -1.52
SDF2-204ENST00000587338 IFI27L1Q96BM0 104 aa5.53□□□□□ -1.52
SDF2-204ENST00000587338 CHCHD5Q9BSY4 110 aa5.53□□□□□ -1.52
SDF2-204ENST00000587338 TMEM243Q9BU79 118 aa5.53□□□□□ -1.52
SDF2-204ENST00000587338 TRBV6-8A0A0A6YYG3 113 aa5.52□□□□□ -1.53
SDF2-204ENST00000587338 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.52□□□□□ -1.53
SDF2-204ENST00000587338 SCGB1D1O95968 90 aa5.52□□□□□ -1.53
SDF2-204ENST00000587338 C3orf79P0CE67 100 aa5.52□□□□□ -1.53
SDF2-204ENST00000587338 GAGE6Q13070 117 aa5.52□□□□□ -1.53
SDF2-204ENST00000587338 XP32Q5T750 250 aa5.52□□□□□ -1.53
SDF2-204ENST00000587338 AMMECR1LQ6DCA0 310 aa5.52□□□□□ -1.53
SDF2-204ENST00000587338 DGAT2L7PQ6IED9 249 aa5.52□□□□□ -1.53
SDF2-204ENST00000587338 NTM-AS1Q6ZSK4 140 aa5.52□□□□□ -1.53
SDF2-204ENST00000587338 C20orf203Q8NBC4 194 aa5.52□□□□□ -1.53
SDF2-204ENST00000587338 CHCHD7Q9BUK0 85 aa5.52□□□□□ -1.53
SDF2-204ENST00000587338 LINC01549A6NIU2 74 aa5.51□□□□□ -1.53
SDF2-204ENST00000587338 LINC00694P0DN24 101 aa5.51□□□□□ -1.53
SDF2-204ENST00000587338 SMAGPQ0VAQ4 97 aa5.51□□□□□ -1.53
SDF2-204ENST00000587338 C14orf177Q52M58 125 aa5.51□□□□□ -1.53
SDF2-204ENST00000587338 ERASQ7Z444 233 aa5.51□□□□□ -1.53
SDF2-204ENST00000587338 KLK12Q9UKR0 248 aa5.51□□□□□ -1.53
SDF2-204ENST00000587338 C20orf202A1L168 122 aa5.5□□□□□ -1.53
SDF2-204ENST00000587338 SYS1-DBNDD2H3BUS1 97 aa5.5□□□□□ -1.53
SDF2-204ENST00000587338 FGF6P10767 208 aa5.5□□□□□ -1.53
SDF2-204ENST00000587338 ODF1Q14990 250 aa5.5□□□□□ -1.53
SDF2-204ENST00000587338 UBE2WQ96B02 151 aa5.5□□□□□ -1.53
SDF2-204ENST00000587338 TMEM141Q96I45 108 aa5.5□□□□□ -1.53
SDF2-204ENST00000587338 TMEM101Q96IK0 257 aa5.5□□□□□ -1.53
SDF2-204ENST00000587338 OPRPNQ99935 248 aaPredicted RBP5.5□□□□□ -1.53
SDF2-204ENST00000587338 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.5□□□□□ -1.53
SDF2-204ENST00000587338 RNASE13Q5GAN3 156 aaKnown RBP5.49□□□□□ -1.53
SDF2-204ENST00000587338 ZC2HC1BQ5TFG8 222 aa5.49□□□□□ -1.53
SDF2-204ENST00000587338 PET117Q6UWS5 81 aa5.49□□□□□ -1.53
SDF2-204ENST00000587338 OR5A1Q8NGJ0 315 aa5.49□□□□□ -1.53
SDF2-204ENST00000587338 TIMM17AQ99595 171 aa5.49□□□□□ -1.53
SDF2-204ENST00000587338 PMCHL2Q9BQD1 86 aa5.49□□□□□ -1.53
SDF2-204ENST00000587338 VCX2Q9H322 139 aa5.49□□□□□ -1.53
SDF2-204ENST00000587338 SPANXA1Q9NS26 97 aa5.49□□□□□ -1.53
SDF2-204ENST00000587338 UBE2D4Q9Y2X8 147 aa5.49□□□□□ -1.53
SDF2-204ENST00000587338 IGLV4-3A0A075B6K6 122 aa5.48□□□□□ -1.53
SDF2-204ENST00000587338 A0A087WX48 190 aa5.48□□□□□ -1.53
SDF2-204ENST00000587338 IGIPA6NJ69 53 aa5.48□□□□□ -1.53
SDF2-204ENST00000587338 PANO1I0J062 215 aa5.48□□□□□ -1.53
SDF2-204ENST00000587338 JOSD1Q15040 202 aaPredicted RBP5.48□□□□□ -1.53
SDF2-204ENST00000587338 PAPPA-AS1Q5QFB9 102 aa5.48□□□□□ -1.53
SDF2-204ENST00000587338 TEX43Q6ZNM6 134 aa5.48□□□□□ -1.53
SDF2-204ENST00000587338 Q6ZUT4 128 aa5.48□□□□□ -1.53
SDF2-204ENST00000587338 IGKV3OR2-268A0A0C4DH90 116 aa5.47□□□□□ -1.53
SDF2-204ENST00000587338 USP17L23D6RBM5 183 aa5.47□□□□□ -1.53
SDF2-204ENST00000587338 H7C423 109 aa5.47□□□□□ -1.53
SDF2-204ENST00000587338 PMVKQ15126 192 aa5.47□□□□□ -1.53
SDF2-204ENST00000587338 PYY3Q5JQD4 70 aa5.47□□□□□ -1.53
SDF2-204ENST00000587338 ATOH7Q8N100 152 aa5.47□□□□□ -1.53
SDF2-204ENST00000587338 C2orf88Q9BSF0 95 aa5.47□□□□□ -1.53
SDF2-204ENST00000587338 TIMM21Q9BVV7 248 aa5.47□□□□□ -1.53
SDF2-204ENST00000587338 C1orf43Q9BWL3 253 aa5.47□□□□□ -1.53
SDF2-204ENST00000587338 CHTOPQ9Y3Y2 248 aaKnown RBP5.47□□□□□ -1.53
SDF2-204ENST00000587338 PYGO1Q9Y3Y4 419 aa5.47□□□□□ -1.53
SDF2-204ENST00000587338 ZNF25P17030 456 aaPredicted RBP5.46□□□□□ -1.54
SDF2-204ENST00000587338 PKIAP61925 76 aa5.46□□□□□ -1.54
SDF2-204ENST00000587338 MPV17L2Q567V2 206 aa5.46□□□□□ -1.54
SDF2-204ENST00000587338 MRPL52Q86TS9 123 aaKnown RBP5.46□□□□□ -1.54
SDF2-204ENST00000587338 ZNF664Q8N3J9 261 aa5.46□□□□□ -1.54
SDF2-204ENST00000587338 CST9LQ9H4G1 147 aa5.46□□□□□ -1.54
SDF2-204ENST00000587338 IGLV4-60A0A075B6I1 120 aa5.45□□□□□ -1.54
SDF2-204ENST00000587338 TRAV12-1A0A0B4J245 112 aa5.45□□□□□ -1.54
SDF2-204ENST00000587338 CRPP02741 224 aa5.45□□□□□ -1.54
SDF2-204ENST00000587338 ANGP03950 147 aaKnown RBP5.45□□□□□ -1.54
SDF2-204ENST00000587338 SMIM6P0DI80 62 aa5.45□□□□□ -1.54
SDF2-204ENST00000587338 RBX1P62877 108 aa5.45□□□□□ -1.54
SDF2-204ENST00000587338 MRPS36P82909 103 aaKnown RBP5.45□□□□□ -1.54
SDF2-204ENST00000587338 LINC01545Q5VT33 79 aa5.45□□□□□ -1.54
SDF2-204ENST00000587338 CLPSL2Q6UWE3 100 aa5.45□□□□□ -1.54
SDF2-204ENST00000587338 C9orf163Q8N9P6 203 aa5.45□□□□□ -1.54
SDF2-204ENST00000587338 C12orf57Q99622 126 aa5.45□□□□□ -1.54
SDF2-204ENST00000587338 CDC42SE2Q9NRR3 84 aa5.45□□□□□ -1.54
SDF2-204ENST00000587338 MRPL35Q9NZE8 188 aaKnown RBP5.45□□□□□ -1.54
SDF2-204ENST00000587338 TRAV13-1A0A0B4J241 112 aa5.44□□□□□ -1.54
SDF2-204ENST00000587338 HSBP1L1C9JCN9 74 aa5.44□□□□□ -1.54
SDF2-204ENST00000587338 F8VRH5 84 aa5.44□□□□□ -1.54
SDF2-204ENST00000587338 DPM2O94777 84 aa5.44□□□□□ -1.54
SDF2-204ENST00000587338 IGKCP01834 107 aa5.44□□□□□ -1.54
SDF2-204ENST00000587338 NPSP0C0P6 89 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms