RNA–Protein interactions for RNA: ENST00000586856.1

ERCC2-209, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-209ENST00000586856 MT-ND6P03923 174 aa15.35■□□□□ 0.05
ERCC2-209ENST00000586856 SPACA4Q8TDM5 124 aa15.35■□□□□ 0.05
ERCC2-209ENST00000586856 SVBPQ8N300 66 aa15.34■□□□□ 0.05
ERCC2-209ENST00000586856 PRSS3P2Q8NHM4 247 aa15.34■□□□□ 0.05
ERCC2-209ENST00000586856 MRPL18Q9H0U6 180 aaKnown RBP15.34■□□□□ 0.05
ERCC2-209ENST00000586856 SRRM2Q9UQ35 2752 aaKnown RBP15.34■□□□□ 0.05
ERCC2-209ENST00000586856 IGLV4-69A0A075B6H9 119 aa15.33■□□□□ 0.04
ERCC2-209ENST00000586856 IGHV3OR16-9A0A0B4J2B5 98 aa15.33■□□□□ 0.04
ERCC2-209ENST00000586856 SNAPINO95295 136 aa15.33■□□□□ 0.04
ERCC2-209ENST00000586856 SYCNQ0VAF6 134 aa15.33■□□□□ 0.04
ERCC2-209ENST00000586856 ALKBH7Q9BT30 221 aaPredicted RBP15.33■□□□□ 0.04
ERCC2-209ENST00000586856 APOMO95445 188 aa15.32■□□□□ 0.04
ERCC2-209ENST00000586856 TEX43Q6ZNM6 134 aa15.32■□□□□ 0.04
ERCC2-209ENST00000586856 FLG2Q5D862 2391 aaPredicted RBP15.32■□□□□ 0.04
ERCC2-209ENST00000586856 TGIF2-C20orf24A0A0A6YYL0 155 aa15.31■□□□□ 0.04
ERCC2-209ENST00000586856 FABP9Q0Z7S8 132 aa15.31■□□□□ 0.04
ERCC2-209ENST00000586856 IGKV2-24A0A0C4DH68 120 aa15.3■□□□□ 0.04
ERCC2-209ENST00000586856 IGIPA6NJ69 53 aa15.3■□□□□ 0.04
ERCC2-209ENST00000586856 SPAG11BQ08648 103 aa15.3■□□□□ 0.04
ERCC2-209ENST00000586856 Q6ZN92 141 aa15.3■□□□□ 0.04
ERCC2-209ENST00000586856 C2orf88Q9BSF0 95 aa15.3■□□□□ 0.04
ERCC2-209ENST00000586856 A0A087WYN8 130 aa15.29■□□□□ 0.04
ERCC2-209ENST00000586856 NPSP0C0P6 89 aa15.29■□□□□ 0.04
ERCC2-209ENST00000586856 LINC00242Q5T6M2 205 aa15.29■□□□□ 0.04
ERCC2-209ENST00000586856 LINC00173Q6ZV60 143 aa15.29■□□□□ 0.04
ERCC2-209ENST00000586856 DPH3Q96FX2 82 aa15.29■□□□□ 0.04
ERCC2-209ENST00000586856 PKIGQ9Y2B9 76 aa15.29■□□□□ 0.04
ERCC2-209ENST00000586856 A0A096LNI7 61 aa15.28■□□□□ 0.04
ERCC2-209ENST00000586856 G0S2P27469 103 aa15.28■□□□□ 0.04
ERCC2-209ENST00000586856 KRTAP10-4P60372 401 aaPredicted RBP15.28■□□□□ 0.04
ERCC2-209ENST00000586856 ZC2HC1BQ5TFG8 222 aa15.28■□□□□ 0.04
ERCC2-209ENST00000586856 Q6ZRU5 148 aa15.28■□□□□ 0.04
ERCC2-209ENST00000586856 OR10D4PQ8NGN7 298 aa15.28■□□□□ 0.04
ERCC2-209ENST00000586856 ORAOV1Q8WV07 137 aa15.28■□□□□ 0.04
ERCC2-209ENST00000586856 CAMK2N2Q96S95 79 aa15.28■□□□□ 0.04
ERCC2-209ENST00000586856 AMELXQ99217 191 aa15.28■□□□□ 0.04
ERCC2-209ENST00000586856 UBE2D1P51668 147 aa15.27■□□□□ 0.04
ERCC2-209ENST00000586856 MAJINQ3KP22 176 aa15.27■□□□□ 0.04
ERCC2-209ENST00000586856 TOMM6Q96B49 74 aa15.27■□□□□ 0.04
ERCC2-209ENST00000586856 C2orf48Q96LS8 159 aa15.27■□□□□ 0.04
ERCC2-209ENST00000586856 VCX2Q9H322 139 aa15.26■□□□□ 0.03
ERCC2-209ENST00000586856 LINC01546A6NGU7 62 aa15.25■□□□□ 0.03
ERCC2-209ENST00000586856 RPL37AP61513 92 aaKnown RBP15.25■□□□□ 0.03
ERCC2-209ENST00000586856 TIMM17AQ99595 171 aa15.25■□□□□ 0.03
ERCC2-209ENST00000586856 PLAC8Q9NZF1 115 aa15.25■□□□□ 0.03
ERCC2-209ENST00000586856 A0A087WZ39 114 aa15.24■□□□□ 0.03
ERCC2-209ENST00000586856 TRAPPC1Q9Y5R8 145 aa15.24■□□□□ 0.03
ERCC2-209ENST00000586856 PAPPA-AS1Q5QFB9 102 aa15.23■□□□□ 0.03
ERCC2-209ENST00000586856 FA2HQ7L5A8 372 aa15.23■□□□□ 0.03
ERCC2-209ENST00000586856 SCGB3A1Q96QR1 104 aa15.21■□□□□ 0.03
ERCC2-209ENST00000586856 SMCO4Q9NRQ5 59 aa15.21■□□□□ 0.03
ERCC2-209ENST00000586856 LINC00474Q9P2X8 69 aa15.21■□□□□ 0.03
ERCC2-209ENST00000586856 LOC107984640A0A0U1RRK4 108 aa15.2■□□□□ 0.02
ERCC2-209ENST00000586856 ERASQ7Z444 233 aa15.2■□□□□ 0.02
ERCC2-209ENST00000586856 STPG4Q8N801 248 aa15.2■□□□□ 0.02
ERCC2-209ENST00000586856 HERC1Q15751 4861 aa15.19■□□□□ 0.02
ERCC2-209ENST00000586856 F8WDY8 70 aa15.18■□□□□ 0.02
ERCC2-209ENST00000586856 PTTG1IPP53801 180 aa15.18■□□□□ 0.02
ERCC2-209ENST00000586856 FAM19A3Q7Z5A8 133 aa15.18■□□□□ 0.02
ERCC2-209ENST00000586856 YPEL4Q96NS1 127 aa15.18■□□□□ 0.02
ERCC2-209ENST00000586856 LINC01549A6NIU2 74 aa15.17■□□□□ 0.02
ERCC2-209ENST00000586856 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.17■□□□□ 0.02
ERCC2-209ENST00000586856 NDUFA1O15239 70 aa15.17■□□□□ 0.02
ERCC2-209ENST00000586856 GAGE2BQ13066 116 aa15.17■□□□□ 0.02
ERCC2-209ENST00000586856 LINC01561Q8N1V8 128 aa15.17■□□□□ 0.02
ERCC2-209ENST00000586856 C18orf32Q8TCD1 76 aa15.17■□□□□ 0.02
ERCC2-209ENST00000586856 MRPL35Q9NZE8 188 aaKnown RBP15.17■□□□□ 0.02
ERCC2-209ENST00000586856 MYCBP2O75592 4640 aa15.16■□□□□ 0.02
ERCC2-209ENST00000586856 DMBT1Q9UGM3 2413 aaPredicted RBP15.16■□□□□ 0.02
ERCC2-209ENST00000586856 A0A0J9YXV3 536 aa15.16■□□□□ 0.02
ERCC2-209ENST00000586856 RNF151Q2KHN1 245 aa15.16■□□□□ 0.02
ERCC2-209ENST00000586856 SEC11AP67812 179 aa15.15■□□□□ 0.02
ERCC2-209ENST00000586856 KIAA0087Q14695 138 aa15.15■□□□□ 0.02
ERCC2-209ENST00000586856 C10orf25Q5T742 122 aa15.15■□□□□ 0.02
ERCC2-209ENST00000586856 RPL18AQ02543 176 aaKnown RBP15.14■□□□□ 0.01
ERCC2-209ENST00000586856 URB1-AS1Q96HZ7 61 aa15.14■□□□□ 0.01
ERCC2-209ENST00000586856 HERVK_113P63121 156 aa15.13■□□□□ 0.01
ERCC2-209ENST00000586856 UNQ6190/PRO20217Q6UXQ8 127 aa15.13■□□□□ 0.01
ERCC2-209ENST00000586856 CBLN2Q8IUK8 224 aa15.13■□□□□ 0.01
ERCC2-209ENST00000586856 C7orf33Q8WU49 177 aa15.13■□□□□ 0.01
ERCC2-209ENST00000586856 GEMIN7Q9H840 131 aaKnown RBP15.13■□□□□ 0.01
ERCC2-209ENST00000586856 SLC7A5P1Q8MH63 180 aa15.12■□□□□ 0.01
ERCC2-209ENST00000586856 C6orf48Q9UBA6 75 aa15.12■□□□□ 0.01
ERCC2-209ENST00000586856 HNRNPA3P51991 378 aaKnown RBP15.11■□□□□ 0.01
ERCC2-209ENST00000586856 CDKN2A-AS1Q9UH64 79 aa15.11■□□□□ 0.01
ERCC2-209ENST00000586856 A0A096LNJ9 63 aa15.1■□□□□ 0.01
ERCC2-209ENST00000586856 LINC00614P0C842 121 aa15.09■□□□□ 0.01
ERCC2-209ENST00000586856 C2orf82Q6UX34 121 aa15.09■□□□□ 0.01
ERCC2-209ENST00000586856 CST9LQ9H4G1 147 aa15.09■□□□□ 0.01
ERCC2-209ENST00000586856 PACRGQ96M98 296 aaPredicted RBP15.08■□□□□ 0
ERCC2-209ENST00000586856 TOMM7Q9P0U1 55 aa15.08■□□□□ 0
ERCC2-209ENST00000586856 HBDP02042 147 aa15.07■□□□□ 0
ERCC2-209ENST00000586856 PRSS2P07478 247 aa15.07■□□□□ 0
ERCC2-209ENST00000586856 PMVKQ15126 192 aa15.07■□□□□ 0
ERCC2-209ENST00000586856 LINC00469Q8N7U9 141 aa15.07■□□□□ 0
ERCC2-209ENST00000586856 TRBV30A0A0K0K1B3 111 aa15.06■□□□□ 0
ERCC2-209ENST00000586856 TINCRA0A1B0GVN0 87 aa15.06■□□□□ 0
ERCC2-209ENST00000586856 TLX1NBP0CAT3 122 aa15.06■□□□□ 0
ERCC2-209ENST00000586856 PMCHL1Q16048 86 aa15.06■□□□□ 0
ERCC2-209ENST00000586856 IGLV5-45A0A087WSX0 123 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms