RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 CCDC140Q96MF4 163 aa7.24□□□□□ -1.25
ZNF540-203ENST00000586134 CCL13Q99616 98 aa7.24□□□□□ -1.25
ZNF540-203ENST00000586134 TRAV23DV6A0A075B6W5 121 aa7.23□□□□□ -1.25
ZNF540-203ENST00000586134 VCYO14598 125 aa7.23□□□□□ -1.25
ZNF540-203ENST00000586134 IGKV1-17P01599 117 aa7.23□□□□□ -1.25
ZNF540-203ENST00000586134 TFF1P04155 84 aa7.23□□□□□ -1.25
ZNF540-203ENST00000586134 IGHV3-30-3P0DP02 117 aa7.23□□□□□ -1.25
ZNF540-203ENST00000586134 C10orf55Q5SWW7 151 aa7.23□□□□□ -1.25
ZNF540-203ENST00000586134 GAFA1Q96PS6 74 aa7.23□□□□□ -1.25
ZNF540-203ENST00000586134 ZFAND3Q9H8U3 227 aa7.23□□□□□ -1.25
ZNF540-203ENST00000586134 Q9UF83 564 aa7.23□□□□□ -1.25
ZNF540-203ENST00000586134 NACAE9PAV3 2078 aa7.23□□□□□ -1.25
ZNF540-203ENST00000586134 IGKV1D-17A0A075B6S4 117 aa7.23□□□□□ -1.25
ZNF540-203ENST00000586134 IGHV4OR15-8A0A075B7B6 117 aa7.23□□□□□ -1.25
ZNF540-203ENST00000586134 A0A087WW49 117 aa7.23□□□□□ -1.25
ZNF540-203ENST00000586134 SOCS3O14543 225 aa7.23□□□□□ -1.25
ZNF540-203ENST00000586134 HCP5Q6MZN7 132 aa7.23□□□□□ -1.25
ZNF540-203ENST00000586134 Q8N2B8 174 aa7.23□□□□□ -1.25
ZNF540-203ENST00000586134 MGAM2Q2M2H8 2515 aa7.22□□□□□ -1.25
ZNF540-203ENST00000586134 IGLV2-23P01705 113 aa7.22□□□□□ -1.25
ZNF540-203ENST00000586134 MED14OSP0DP75 135 aa7.22□□□□□ -1.25
ZNF540-203ENST00000586134 RPL27AP46776 148 aaKnown RBP7.22□□□□□ -1.25
ZNF540-203ENST00000586134 DAD1P61803 113 aa7.22□□□□□ -1.25
ZNF540-203ENST00000586134 RPL39LQ96EH5 51 aaKnown RBP7.22□□□□□ -1.25
ZNF540-203ENST00000586134 TM2D3Q9BRN9 247 aa7.22□□□□□ -1.25
ZNF540-203ENST00000586134 I3L2K1 104 aa7.22□□□□□ -1.25
ZNF540-203ENST00000586134 ESRGQ1W209 222 aa7.22□□□□□ -1.25
ZNF540-203ENST00000586134 BRD3OSQ6XYD6 125 aa7.22□□□□□ -1.25
ZNF540-203ENST00000586134 VMO1Q7Z5L0 202 aa7.22□□□□□ -1.25
ZNF540-203ENST00000586134 NDUFA12Q9UI09 145 aa7.22□□□□□ -1.25
ZNF540-203ENST00000586134 Q6ZSV7 163 aa7.21□□□□□ -1.26
ZNF540-203ENST00000586134 GPHB5Q86YW7 130 aa7.21□□□□□ -1.26
ZNF540-203ENST00000586134 ZNRD1Q9P1U0 126 aa7.21□□□□□ -1.26
ZNF540-203ENST00000586134 POLR2KP53803 58 aaKnown RBP7.2□□□□□ -1.26
ZNF540-203ENST00000586134 MPLKIPQ8TAP9 179 aa7.2□□□□□ -1.26
ZNF540-203ENST00000586134 DYNLRB2Q8TF09 96 aa7.2□□□□□ -1.26
ZNF540-203ENST00000586134 RBM12B-AS1Q9P1G2 102 aa7.2□□□□□ -1.26
ZNF540-203ENST00000586134 PKD1L1Q8TDX9 2849 aa7.19□□□□□ -1.26
ZNF540-203ENST00000586134 CLPSL1A2RUU4 121 aa7.19□□□□□ -1.26
ZNF540-203ENST00000586134 LYRM9A8MSI8 78 aa7.19□□□□□ -1.26
ZNF540-203ENST00000586134 PF4P02776 101 aa7.19□□□□□ -1.26
ZNF540-203ENST00000586134 KTN1-AS1Q86SY8 53 aa7.19□□□□□ -1.26
ZNF540-203ENST00000586134 C14orf132Q9NPU4 83 aa7.19□□□□□ -1.26
ZNF540-203ENST00000586134 C11orf21Q9P2W6 132 aa7.19□□□□□ -1.26
ZNF540-203ENST00000586134 RMI2Q96E14 147 aa7.18□□□□□ -1.26
ZNF540-203ENST00000586134 ERC2-IT1O76042 136 aa7.18□□□□□ -1.26
ZNF540-203ENST00000586134 MIFP14174 115 aa7.18□□□□□ -1.26
ZNF540-203ENST00000586134 RNASE4P34096 147 aaKnown RBP7.18□□□□□ -1.26
ZNF540-203ENST00000586134 MRGPRG-AS1Q2M3A8 158 aa7.18□□□□□ -1.26
ZNF540-203ENST00000586134 C6orf223Q8N319 242 aa7.18□□□□□ -1.26
ZNF540-203ENST00000586134 ZNRF1Q8ND25 227 aa7.18□□□□□ -1.26
ZNF540-203ENST00000586134 IGHV3-21A0A0B4J1V1 117 aa7.17□□□□□ -1.26
ZNF540-203ENST00000586134 TEX22C9J3V5 150 aa7.17□□□□□ -1.26
ZNF540-203ENST00000586134 IGHV4-59P01825 116 aa7.17□□□□□ -1.26
ZNF540-203ENST00000586134 RPL39P62891 51 aaKnown RBP7.17□□□□□ -1.26
ZNF540-203ENST00000586134 Q1T7F1 81 aa7.17□□□□□ -1.26
ZNF540-203ENST00000586134 IGHV3-64A0A075B6Q5 118 aa7.17□□□□□ -1.26
ZNF540-203ENST00000586134 TRBV6-5A0A0K0K1A5 114 aa7.17□□□□□ -1.26
ZNF540-203ENST00000586134 MRPL53Q96EL3 112 aaKnown RBP7.17□□□□□ -1.26
ZNF540-203ENST00000586134 MGPP08493 103 aa7.16□□□□□ -1.26
ZNF540-203ENST00000586134 PROK1P58294 105 aa7.16□□□□□ -1.26
ZNF540-203ENST00000586134 HIST2H2BDQ6DRA6 164 aa7.16□□□□□ -1.26
ZNF540-203ENST00000586134 ENHOQ6UWT2 76 aa7.16□□□□□ -1.26
ZNF540-203ENST00000586134 LINC01006Q8NI28 216 aa7.16□□□□□ -1.26
ZNF540-203ENST00000586134 LENEPQ9Y5L5 61 aa7.16□□□□□ -1.26
ZNF540-203ENST00000586134 A0A0J9YXV3 536 aa7.15□□□□□ -1.26
ZNF540-203ENST00000586134 DGAT2L7PQ6IED9 249 aa7.15□□□□□ -1.26
ZNF540-203ENST00000586134 LINC00308Q8TCZ7 52 aa7.15□□□□□ -1.26
ZNF540-203ENST00000586134 UBE2E2Q96LR5 201 aa7.15□□□□□ -1.26
ZNF540-203ENST00000586134 UBL5Q9BZL1 73 aa7.15□□□□□ -1.26
ZNF540-203ENST00000586134 ADARB2-AS1A8MUL3 147 aa7.15□□□□□ -1.27
ZNF540-203ENST00000586134 ODF3BA8MYP8 253 aa7.15□□□□□ -1.27
ZNF540-203ENST00000586134 H0YGX0 51 aa7.15□□□□□ -1.27
ZNF540-203ENST00000586134 BUB1B-PAK6H3BSN5 160 aa7.15□□□□□ -1.27
ZNF540-203ENST00000586134 NDUFS5O43920 106 aa7.15□□□□□ -1.27
ZNF540-203ENST00000586134 PRB4P10163 310 aaPredicted RBP7.15□□□□□ -1.27
ZNF540-203ENST00000586134 FAM218AQ96MZ4 157 aa7.15□□□□□ -1.27
ZNF540-203ENST00000586134 C11orf68Q9H3H3 251 aaKnown RBP7.15□□□□□ -1.27
ZNF540-203ENST00000586134 SNURFQ9Y675 71 aa7.15□□□□□ -1.27
ZNF540-203ENST00000586134 NDUFA1O15239 70 aa7.14□□□□□ -1.27
ZNF540-203ENST00000586134 APOC4P55056 127 aa7.14□□□□□ -1.27
ZNF540-203ENST00000586134 FAM229BQ4G0N7 80 aa7.14□□□□□ -1.27
ZNF540-203ENST00000586134 MINOS1Q5TGZ0 78 aa7.14□□□□□ -1.27
ZNF540-203ENST00000586134 SOSTDC1Q6X4U4 206 aa7.14□□□□□ -1.27
ZNF540-203ENST00000586134 MINOS1-NBL1R4GNA1 71 aa7.14□□□□□ -1.27
ZNF540-203ENST00000586134 WNK1Q9H4A3 2382 aa7.14□□□□□ -1.27
ZNF540-203ENST00000586134 JMJD7-PLA2G4BH0Y9G9 81 aa7.13□□□□□ -1.27
ZNF540-203ENST00000586134 K7EIM0 57 aa7.13□□□□□ -1.27
ZNF540-203ENST00000586134 PHLDA3Q9Y5J5 127 aa7.13□□□□□ -1.27
ZNF540-203ENST00000586134 IGHV1-8P0DP01 117 aa7.13□□□□□ -1.27
ZNF540-203ENST00000586134 HOXD3P31249 432 aaPredicted RBP7.13□□□□□ -1.27
ZNF540-203ENST00000586134 CD164L2Q6UWJ8 174 aa7.13□□□□□ -1.27
ZNF540-203ENST00000586134 C9orf47Q6ZRZ4 202 aa7.13□□□□□ -1.27
ZNF540-203ENST00000586134 MEGF8Q7Z7M0 2845 aa7.13□□□□□ -1.27
ZNF540-203ENST00000586134 H3BUX3 64 aa7.12□□□□□ -1.27
ZNF540-203ENST00000586134 C15orf32Q32M92 178 aa7.12□□□□□ -1.27
ZNF540-203ENST00000586134 C11orf45Q8TAV5 145 aa7.12□□□□□ -1.27
ZNF540-203ENST00000586134 Q9HAA7 133 aa7.12□□□□□ -1.27
ZNF540-203ENST00000586134 TRRAPQ9Y4A5 3859 aa7.12□□□□□ -1.27
ZNF540-203ENST00000586134 IGLV4-3A0A075B6K6 122 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms