RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 PYY3Q5JQD4 70 aa7.36□□□□□ -1.23
LIG3-207ENST00000586119 Q6ZRU5 148 aa7.36□□□□□ -1.23
LIG3-207ENST00000586119 SMIM2Q9BVW6 85 aa7.36□□□□□ -1.23
LIG3-207ENST00000586119 MAP1LC3AQ9H492 121 aa7.36□□□□□ -1.23
LIG3-207ENST00000586119 H7C423 109 aa7.35□□□□□ -1.23
LIG3-207ENST00000586119 K7EMI3 77 aa7.35□□□□□ -1.23
LIG3-207ENST00000586119 AMTP48728 403 aa7.35□□□□□ -1.23
LIG3-207ENST00000586119 CNBPP62633 177 aaKnown RBP7.35□□□□□ -1.23
LIG3-207ENST00000586119 ALKBH7Q9BT30 221 aaPredicted RBP7.35□□□□□ -1.23
LIG3-207ENST00000586119 TMEM243Q9BU79 118 aa7.35□□□□□ -1.23
LIG3-207ENST00000586119 TSHBP01222 138 aa7.34□□□□□ -1.23
LIG3-207ENST00000586119 FCER1GP30273 86 aa7.34□□□□□ -1.23
LIG3-207ENST00000586119 KIAA1644Q3SXP7 199 aa7.34□□□□□ -1.23
LIG3-207ENST00000586119 LINC00469Q8N7U9 141 aa7.34□□□□□ -1.23
LIG3-207ENST00000586119 OR10D4PQ8NGN7 298 aa7.34□□□□□ -1.23
LIG3-207ENST00000586119 NXT2Q9NPJ8 142 aaKnown RBP7.34□□□□□ -1.23
LIG3-207ENST00000586119 IGHV3-64A0A075B6Q5 118 aa7.33□□□□□ -1.24
LIG3-207ENST00000586119 ESDP10768 282 aa7.33□□□□□ -1.24
LIG3-207ENST00000586119 SMAGPQ0VAQ4 97 aa7.33□□□□□ -1.24
LIG3-207ENST00000586119 JOSD1Q15040 202 aaPredicted RBP7.33□□□□□ -1.24
LIG3-207ENST00000586119 Q8N8P6 123 aa7.33□□□□□ -1.24
LIG3-207ENST00000586119 SPACA4Q8TDM5 124 aa7.33□□□□□ -1.24
LIG3-207ENST00000586119 PACRGQ96M98 296 aaPredicted RBP7.33□□□□□ -1.24
LIG3-207ENST00000586119 IGKV3OR2-268A0A0C4DH90 116 aa7.32□□□□□ -1.24
LIG3-207ENST00000586119 UBE2L6O14933 153 aa7.32□□□□□ -1.24
LIG3-207ENST00000586119 COX6A2Q02221 97 aa7.32□□□□□ -1.24
LIG3-207ENST00000586119 C15orf56Q8N910 161 aa7.32□□□□□ -1.24
LIG3-207ENST00000586119 PRSS3P2Q8NHM4 247 aa7.32□□□□□ -1.24
LIG3-207ENST00000586119 TMEM18Q96B42 140 aa7.32□□□□□ -1.24
LIG3-207ENST00000586119 HIST1H2BLQ99880 126 aa7.32□□□□□ -1.24
LIG3-207ENST00000586119 TRAV8-4A0A0B4J246 113 aa7.31□□□□□ -1.24
LIG3-207ENST00000586119 A0A1B0GUV1 79 aa7.31□□□□□ -1.24
LIG3-207ENST00000586119 GAGE12HA6NDE8 117 aa7.31□□□□□ -1.24
LIG3-207ENST00000586119 FABP4P15090 132 aa7.31□□□□□ -1.24
LIG3-207ENST00000586119 G0S2P27469 103 aa7.31□□□□□ -1.24
LIG3-207ENST00000586119 HIGD2BQ4VC39 106 aa7.31□□□□□ -1.24
LIG3-207ENST00000586119 AP5S1Q9NUS5 200 aa7.31□□□□□ -1.24
LIG3-207ENST00000586119 PLAC8Q9NZF1 115 aa7.31□□□□□ -1.24
LIG3-207ENST00000586119 LOC389332A0A1B0GUA5 103 aa7.3□□□□□ -1.24
LIG3-207ENST00000586119 ZNF25P17030 456 aaPredicted RBP7.3□□□□□ -1.24
LIG3-207ENST00000586119 DDTP30046 118 aa7.3□□□□□ -1.24
LIG3-207ENST00000586119 ORMDL2Q53FV1 153 aa7.3□□□□□ -1.24
LIG3-207ENST00000586119 IGKV2-24A0A0C4DH68 120 aa7.29□□□□□ -1.24
LIG3-207ENST00000586119 LINC01546A6NGU7 62 aa7.29□□□□□ -1.24
LIG3-207ENST00000586119 LINC01549A6NIU2 74 aa7.29□□□□□ -1.24
LIG3-207ENST00000586119 IFI27P40305 119 aaPredicted RBP7.29□□□□□ -1.24
LIG3-207ENST00000586119 MAJINQ3KP22 176 aa7.29□□□□□ -1.24
LIG3-207ENST00000586119 AMMECR1LQ6DCA0 310 aa7.29□□□□□ -1.24
LIG3-207ENST00000586119 MRPL52Q86TS9 123 aaKnown RBP7.29□□□□□ -1.24
LIG3-207ENST00000586119 TIMM21Q9BVV7 248 aa7.29□□□□□ -1.24
LIG3-207ENST00000586119 CSDC2Q9Y534 153 aaKnown RBP7.29□□□□□ -1.24
LIG3-207ENST00000586119 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.28□□□□□ -1.24
LIG3-207ENST00000586119 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.28□□□□□ -1.24
LIG3-207ENST00000586119 IGKV2-29A2NJV5 120 aaPredicted RBP7.28□□□□□ -1.24
LIG3-207ENST00000586119 FGF6P10767 208 aa7.28□□□□□ -1.24
LIG3-207ENST00000586119 FA2HQ7L5A8 372 aa7.28□□□□□ -1.24
LIG3-207ENST00000586119 C18orf32Q8TCD1 76 aa7.28□□□□□ -1.24
LIG3-207ENST00000586119 TMEM101Q96IK0 257 aa7.28□□□□□ -1.24
LIG3-207ENST00000586119 LINC00526Q96FQ7 95 aa7.27□□□□□ -1.25
LIG3-207ENST00000586119 C14orf144Q96I85 54 aa7.27□□□□□ -1.25
LIG3-207ENST00000586119 LINC01600Q96MT4 127 aa7.27□□□□□ -1.25
LIG3-207ENST00000586119 C2orf88Q9BSF0 95 aa7.27□□□□□ -1.25
LIG3-207ENST00000586119 SPANXA1Q9NS26 97 aa7.27□□□□□ -1.25
LIG3-207ENST00000586119 A0A096LNI7 61 aa7.26□□□□□ -1.25
LIG3-207ENST00000586119 NPSP0C0P6 89 aa7.26□□□□□ -1.25
LIG3-207ENST00000586119 LINC00614P0C842 121 aa7.26□□□□□ -1.25
LIG3-207ENST00000586119 PRR3P79522 188 aaKnown RBP7.26□□□□□ -1.25
LIG3-207ENST00000586119 RNASEKQ6P5S7 137 aaKnown RBP7.26□□□□□ -1.25
LIG3-207ENST00000586119 STPG4Q8N801 248 aa7.26□□□□□ -1.25
LIG3-207ENST00000586119 OR5A1Q8NGJ0 315 aa7.26□□□□□ -1.25
LIG3-207ENST00000586119 CYSLTR1Q9Y271 337 aa7.26□□□□□ -1.25
LIG3-207ENST00000586119 UBE2D4Q9Y2X8 147 aa7.26□□□□□ -1.25
LIG3-207ENST00000586119 PYGO1Q9Y3Y4 419 aa7.26□□□□□ -1.25
LIG3-207ENST00000586119 KRTAP10-8P60410 259 aa7.25□□□□□ -1.25
LIG3-207ENST00000586119 PDZD11Q5EBL8 140 aa7.25□□□□□ -1.25
LIG3-207ENST00000586119 C7orf33Q8WU49 177 aa7.25□□□□□ -1.25
LIG3-207ENST00000586119 CHCHD10Q8WYQ3 142 aaPredicted RBP7.25□□□□□ -1.25
LIG3-207ENST00000586119 CHCHD1Q96BP2 118 aaKnown RBP7.25□□□□□ -1.25
LIG3-207ENST00000586119 MRPS36P82909 103 aaKnown RBP7.24□□□□□ -1.25
LIG3-207ENST00000586119 CFAP161Q6P656 301 aa7.24□□□□□ -1.25
LIG3-207ENST00000586119 C2orf66Q6UXQ4 117 aa7.24□□□□□ -1.25
LIG3-207ENST00000586119 ZNF664Q8N3J9 261 aa7.24□□□□□ -1.25
LIG3-207ENST00000586119 TOMM6Q96B49 74 aa7.24□□□□□ -1.25
LIG3-207ENST00000586119 CDC42SE2Q9NRR3 84 aa7.24□□□□□ -1.25
LIG3-207ENST00000586119 A0A0J9YXV3 536 aa7.23□□□□□ -1.25
LIG3-207ENST00000586119 FOXI1Q12951 378 aa7.23□□□□□ -1.25
LIG3-207ENST00000586119 PAPPA-AS1Q5QFB9 102 aa7.23□□□□□ -1.25
LIG3-207ENST00000586119 BAGE3Q86Y29 109 aa7.23□□□□□ -1.25
LIG3-207ENST00000586119 URB1-AS1Q96HZ7 61 aa7.23□□□□□ -1.25
LIG3-207ENST00000586119 GVQW2A0A096LPI5 108 aaPredicted RBP7.22□□□□□ -1.25
LIG3-207ENST00000586119 CCL25O15444 150 aa7.22□□□□□ -1.25
LIG3-207ENST00000586119 RPL39P62891 51 aaKnown RBP7.22□□□□□ -1.25
LIG3-207ENST00000586119 TIMM17AQ99595 171 aa7.22□□□□□ -1.25
LIG3-207ENST00000586119 LPAP08519 4548 aa7.22□□□□□ -1.25
LIG3-207ENST00000586119 IGIPA6NJ69 53 aa7.21□□□□□ -1.26
LIG3-207ENST00000586119 SRSF9Q13242 221 aaKnown RBP eCLIP7.21□□□□□ -1.26
LIG3-207ENST00000586119 ERASQ7Z444 233 aa7.21□□□□□ -1.26
LIG3-207ENST00000586119 TMEM141Q96I45 108 aa7.21□□□□□ -1.26
LIG3-207ENST00000586119 HSBP1O75506 76 aa7.2□□□□□ -1.26
LIG3-207ENST00000586119 HBDP02042 147 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms